RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 COL24A1Q17RW2 1714 aa18.2■□□□□ 0.5
TRAPPC12-216ENST00000469400 YBX3P16989 372 aaKnown RBP eCLIP18.2■□□□□ 0.5
TRAPPC12-216ENST00000469400 CCNL1Q9UK58 526 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC12-216ENST00000469400 GRIN3BO60391 1043 aa18.19■□□□□ 0.5
TRAPPC12-216ENST00000469400 ZCRB1Q8TBF4 217 aaKnown RBP18.19■□□□□ 0.5
TRAPPC12-216ENST00000469400 MSH5O43196 834 aa18.18■□□□□ 0.5
TRAPPC12-216ENST00000469400 HOXC9P31274 260 aa18.18■□□□□ 0.5
TRAPPC12-216ENST00000469400 COL23A1Q86Y22 540 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC12-216ENST00000469400 MAP3K19Q56UN5 1328 aa18.18■□□□□ 0.5
TRAPPC12-216ENST00000469400 FBLN1P23142 703 aa18.17■□□□□ 0.5
TRAPPC12-216ENST00000469400 PUS7Q96PZ0 661 aaKnown RBP18.17■□□□□ 0.5
TRAPPC12-216ENST00000469400 SHANK3Q9BYB0 1731 aa18.17■□□□□ 0.5
TRAPPC12-216ENST00000469400 TUBGCP6Q96RT7 1819 aa18.16■□□□□ 0.5
TRAPPC12-216ENST00000469400 AMPHP49418 695 aa18.16■□□□□ 0.5
TRAPPC12-216ENST00000469400 COG3Q96JB2 828 aa18.16■□□□□ 0.5
TRAPPC12-216ENST00000469400 MEGF6O75095 1541 aa18.15■□□□□ 0.5
TRAPPC12-216ENST00000469400 IFFO2Q5TF58 517 aa18.15■□□□□ 0.5
TRAPPC12-216ENST00000469400 FAM208AQ9UK61 1670 aaKnown RBP18.15■□□□□ 0.5
TRAPPC12-216ENST00000469400 USP47Q96K76 1375 aa18.15■□□□□ 0.5
TRAPPC12-216ENST00000469400 LY75O60449 1722 aa18.15■□□□□ 0.5
TRAPPC12-216ENST00000469400 DOT1LQ8TEK3 1739 aa18.15■□□□□ 0.5
TRAPPC12-216ENST00000469400 MSL1Q68DK7 614 aa18.14■□□□□ 0.49
TRAPPC12-216ENST00000469400 CEP350Q5VT06 3117 aa18.12■□□□□ 0.49
TRAPPC12-216ENST00000469400 NBPF6Q5VWK0 638 aa18.12■□□□□ 0.49
TRAPPC12-216ENST00000469400 NBPF4Q96M43 638 aa18.12■□□□□ 0.49
TRAPPC12-216ENST00000469400 CD2APQ9Y5K6 639 aa18.11■□□□□ 0.49
TRAPPC12-216ENST00000469400 ATP10DQ9P241 1426 aa18.1■□□□□ 0.49
TRAPPC12-216ENST00000469400 CGNL1Q0VF96 1302 aa18.1■□□□□ 0.49
TRAPPC12-216ENST00000469400 USHBP1Q8N6Y0 703 aa18.1■□□□□ 0.49
TRAPPC12-216ENST00000469400 RRS1Q15050 365 aaKnown RBP18.09■□□□□ 0.49
TRAPPC12-216ENST00000469400 TESK2Q96S53 571 aa18.09■□□□□ 0.49
TRAPPC12-216ENST00000469400 RTL1A6NKG5 1358 aa18.08■□□□□ 0.49
TRAPPC12-216ENST00000469400 RAPGEF4Q8WZA2 1011 aa18.08■□□□□ 0.48
TRAPPC12-216ENST00000469400 RGPD2P0DJD1 1756 aa18.07■□□□□ 0.48
TRAPPC12-216ENST00000469400 FLAD1Q8NFF5 587 aa18.07■□□□□ 0.48
TRAPPC12-216ENST00000469400 GPBP1L1Q9HC44 474 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC12-216ENST00000469400 ST20-MTHFSA0A0A6YYL1 179 aa18.06■□□□□ 0.48
TRAPPC12-216ENST00000469400 HMGB2P26583 209 aaKnown RBP18.06■□□□□ 0.48
TRAPPC12-216ENST00000469400 PALLDQ8WX93 1383 aa18.05■□□□□ 0.48
TRAPPC12-216ENST00000469400 TATP17735 454 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC12-216ENST00000469400 MPRIPQ6WCQ1 1025 aa18.05■□□□□ 0.48
TRAPPC12-216ENST00000469400 PCDH11XQ9BZA7 1347 aa18.04■□□□□ 0.48
TRAPPC12-216ENST00000469400 PCDH11YQ9BZA8 1340 aa18.04■□□□□ 0.48
TRAPPC12-216ENST00000469400 FYB1O15117 783 aa18.04■□□□□ 0.48
TRAPPC12-216ENST00000469400 GGNBP2Q9H3C7 697 aa18.04■□□□□ 0.48
TRAPPC12-216ENST00000469400 ADCY9O60503 1353 aa18.04■□□□□ 0.48
TRAPPC12-216ENST00000469400 AMIGO3Q86WK7 504 aa18.03■□□□□ 0.48
TRAPPC12-216ENST00000469400 ZNF526Q8TF50 670 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC12-216ENST00000469400 SMG6Q86US8 1419 aaKnown RBP18.03■□□□□ 0.48
TRAPPC12-216ENST00000469400 C5P01031 1676 aa18.03■□□□□ 0.48
TRAPPC12-216ENST00000469400 CYP27B1O15528 508 aa18.02■□□□□ 0.48
TRAPPC12-216ENST00000469400 HSP90AB2PQ58FF8 381 aa18.02■□□□□ 0.48
TRAPPC12-216ENST00000469400 TONSLQ96HA7 1378 aa18.02■□□□□ 0.47
TRAPPC12-216ENST00000469400 SLC24A1O60721 1099 aa18.01■□□□□ 0.47
TRAPPC12-216ENST00000469400 HSPA6P17066 643 aa18.01■□□□□ 0.47
TRAPPC12-216ENST00000469400 AK7Q96M32 723 aa18.01■□□□□ 0.47
TRAPPC12-216ENST00000469400 PHF14O94880 888 aa18■□□□□ 0.47
TRAPPC12-216ENST00000469400 SMIM5Q71RC9 77 aa18■□□□□ 0.47
TRAPPC12-216ENST00000469400 SMARCC1Q92922 1105 aaPredicted RBP18■□□□□ 0.47
TRAPPC12-216ENST00000469400 WWC3Q9ULE0 1092 aa18■□□□□ 0.47
TRAPPC12-216ENST00000469400 INSRP06213 1382 aa18■□□□□ 0.47
TRAPPC12-216ENST00000469400 IGSF1Q8N6C5 1336 aa17.99■□□□□ 0.47
TRAPPC12-216ENST00000469400 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.99■□□□□ 0.47
TRAPPC12-216ENST00000469400 PIGBQ92521 554 aa17.98■□□□□ 0.47
TRAPPC12-216ENST00000469400 FLT4P35916 1363 aa17.97■□□□□ 0.47
TRAPPC12-216ENST00000469400 TAF1LQ8IZX4 1826 aa17.97■□□□□ 0.47
TRAPPC12-216ENST00000469400 C4BP0C0L5 1744 aa17.97■□□□□ 0.47
TRAPPC12-216ENST00000469400 KIF24Q5T7B8 1368 aa17.95■□□□□ 0.46
TRAPPC12-216ENST00000469400 SSFA2P28290 1259 aa17.95■□□□□ 0.46
TRAPPC12-216ENST00000469400 NKX1-1Q15270 411 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC12-216ENST00000469400 LINC00116Q8NCU8 138 aa17.95■□□□□ 0.46
TRAPPC12-216ENST00000469400 LOC102724428A0A0B4J2F2 783 aa17.94■□□□□ 0.46
TRAPPC12-216ENST00000469400 KIF3CO14782 793 aa17.94■□□□□ 0.46
TRAPPC12-216ENST00000469400 SIK1P57059 783 aa17.94■□□□□ 0.46
TRAPPC12-216ENST00000469400 NSD3Q9BZ95 1437 aa17.94■□□□□ 0.46
TRAPPC12-216ENST00000469400 TOGARAM1Q9Y4F4 1720 aa17.94■□□□□ 0.46
TRAPPC12-216ENST00000469400 TMF1P82094 1093 aa17.93■□□□□ 0.46
TRAPPC12-216ENST00000469400 EMILIN1Q9Y6C2 1016 aa17.92■□□□□ 0.46
TRAPPC12-216ENST00000469400 UBR3Q6ZT12 1888 aa17.92■□□□□ 0.46
TRAPPC12-216ENST00000469400 GNPATO15228 680 aa17.91■□□□□ 0.46
TRAPPC12-216ENST00000469400 SPG7Q9UQ90 795 aa17.91■□□□□ 0.46
TRAPPC12-216ENST00000469400 ITGB4P16144 1822 aa17.91■□□□□ 0.46
TRAPPC12-216ENST00000469400 ITPK1Q13572 414 aa17.9■□□□□ 0.46
TRAPPC12-216ENST00000469400 TMOD3Q9NYL9 352 aa17.9■□□□□ 0.46
TRAPPC12-216ENST00000469400 ASAP1Q9ULH1 1129 aa17.9■□□□□ 0.46
TRAPPC12-216ENST00000469400 MMP10P09238 476 aa17.89■□□□□ 0.45
TRAPPC12-216ENST00000469400 ATP6V1AP38606 617 aa17.89■□□□□ 0.45
TRAPPC12-216ENST00000469400 CARD14Q9BXL6 1004 aa17.89■□□□□ 0.45
TRAPPC12-216ENST00000469400 NCAPD2Q15021 1401 aa17.89■□□□□ 0.45
TRAPPC12-216ENST00000469400 PPM1GO15355 546 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC12-216ENST00000469400 PKD1L3Q7Z443 1732 aa17.88■□□□□ 0.45
TRAPPC12-216ENST00000469400 MAP2P11137 1827 aaKnown RBP17.88■□□□□ 0.45
TRAPPC12-216ENST00000469400 EYA1Q99502 592 aa17.87■□□□□ 0.45
TRAPPC12-216ENST00000469400 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.87■□□□□ 0.45
TRAPPC12-216ENST00000469400 CDCA8Q53HL2 280 aa17.86■□□□□ 0.45
TRAPPC12-216ENST00000469400 ATG3Q9NT62 314 aa17.86■□□□□ 0.45
TRAPPC12-216ENST00000469400 PXDNLA1KZ92 1463 aa17.86■□□□□ 0.45
TRAPPC12-216ENST00000469400 PHKG2P15735 406 aa17.85■□□□□ 0.45
TRAPPC12-216ENST00000469400 APLP1P51693 650 aa17.85■□□□□ 0.45
TRAPPC12-216ENST00000469400 TGFB2P61812 414 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms