RNA–Protein interactions for RNA: ENST00000469336.1

UBE3C-204, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-204ENST00000469336 PTGIRP43119 386 aa10.62□□□□□ -0.71
UBE3C-204ENST00000469336 FOXD4L5Q5VV16 416 aaPredicted RBP10.62□□□□□ -0.71
UBE3C-204ENST00000469336 SEPT12Q8IYM1 358 aa10.62□□□□□ -0.71
UBE3C-204ENST00000469336 GPR161Q8N6U8 529 aaKnown RBP10.62□□□□□ -0.71
UBE3C-204ENST00000469336 RNF217Q8TC41 542 aa10.62□□□□□ -0.71
UBE3C-204ENST00000469336 ABL2P42684 1182 aa10.61□□□□□ -0.71
UBE3C-204ENST00000469336 CCDC155Q8N6L0 562 aa10.61□□□□□ -0.71
UBE3C-204ENST00000469336 ZSCAN1Q8NBB4 408 aa10.61□□□□□ -0.71
UBE3C-204ENST00000469336 SLC35F4A4IF30 521 aa10.59□□□□□ -0.71
UBE3C-204ENST00000469336 SCTRP47872 440 aa10.59□□□□□ -0.71
UBE3C-204ENST00000469336 IRF5Q13568 498 aa10.58□□□□□ -0.72
UBE3C-204ENST00000469336 KRT76Q01546 638 aa10.57□□□□□ -0.72
UBE3C-204ENST00000469336 ZNF330Q9Y3S2 320 aaPredicted RBP10.57□□□□□ -0.72
UBE3C-204ENST00000469336 PCDHB11Q9Y5F2 797 aa10.57□□□□□ -0.72
UBE3C-204ENST00000469336 SENP3-EIF4A1A0A087X0R7 540 aa10.56□□□□□ -0.72
UBE3C-204ENST00000469336 ATP5J2-PTCD1G3V325 749 aa10.56□□□□□ -0.72
UBE3C-204ENST00000469336 RHOQP17081 205 aa10.56□□□□□ -0.72
UBE3C-204ENST00000469336 CC2D2BQ6DHV5 1058 aa10.56□□□□□ -0.72
UBE3C-204ENST00000469336 C1orf115Q9H7X2 142 aa10.56□□□□□ -0.72
UBE3C-204ENST00000469336 MEN1O00255 615 aa10.55□□□□□ -0.72
UBE3C-204ENST00000469336 ERVK-9P63128 1117 aa10.55□□□□□ -0.72
UBE3C-204ENST00000469336 WASHC4Q2M389 1173 aa10.55□□□□□ -0.72
UBE3C-204ENST00000469336 PRICKLE2Q7Z3G6 844 aa10.55□□□□□ -0.72
UBE3C-204ENST00000469336 ARID3CA6NKF2 412 aa10.54□□□□□ -0.72
UBE3C-204ENST00000469336 VWA5B2Q8N398 1253 aa10.54□□□□□ -0.72
UBE3C-204ENST00000469336 A0A1W2PRU2 124 aa10.53□□□□□ -0.72
UBE3C-204ENST00000469336 CDC14CA4D256 554 aa10.53□□□□□ -0.72
UBE3C-204ENST00000469336 ITGA6P23229 1130 aa10.53□□□□□ -0.72
UBE3C-204ENST00000469336 RNF20Q5VTR2 975 aa10.53□□□□□ -0.72
UBE3C-204ENST00000469336 CNTNAP3BQ96NU0 1288 aa10.53□□□□□ -0.72
UBE3C-204ENST00000469336 CDCA7Q9BWT1 371 aaPredicted RBP10.53□□□□□ -0.72
UBE3C-204ENST00000469336 CNTNAP3Q9BZ76 1288 aa10.53□□□□□ -0.72
UBE3C-204ENST00000469336 TSGA10IPQ3SY00 556 aa10.52□□□□□ -0.73
UBE3C-204ENST00000469336 LYSMD3Q7Z3D4 306 aa10.52□□□□□ -0.73
UBE3C-204ENST00000469336 CCDC85AQ96PX6 553 aaPredicted RBP10.52□□□□□ -0.73
UBE3C-204ENST00000469336 OSBPL3Q9H4L5 887 aa10.52□□□□□ -0.73
UBE3C-204ENST00000469336 CEP126Q9P2H0 1117 aa10.52□□□□□ -0.73
UBE3C-204ENST00000469336 ZNF777Q9ULD5 760 aaPredicted RBP10.52□□□□□ -0.73
UBE3C-204ENST00000469336 RNF144AP50876 292 aaPredicted RBP10.51□□□□□ -0.73
UBE3C-204ENST00000469336 RNFT1Q5M7Z0 435 aa10.51□□□□□ -0.73
UBE3C-204ENST00000469336 NANOS1Q8WY41 292 aaKnown RBP10.51□□□□□ -0.73
UBE3C-204ENST00000469336 COL25A1Q9BXS0 654 aaPredicted RBP10.51□□□□□ -0.73
UBE3C-204ENST00000469336 CUEDC1Q9NWM3 386 aaPredicted RBP10.51□□□□□ -0.73
UBE3C-204ENST00000469336 MCCD1P59942 119 aaPredicted RBP10.5□□□□□ -0.73
UBE3C-204ENST00000469336 VAC14Q08AM6 782 aa10.5□□□□□ -0.73
UBE3C-204ENST00000469336 ARHGEF10LQ9HCE6 1279 aa10.5□□□□□ -0.73
UBE3C-204ENST00000469336 RAB6BQ9NRW1 208 aa10.5□□□□□ -0.73
UBE3C-204ENST00000469336 POM121CA8CG34 1229 aa10.48□□□□□ -0.73
UBE3C-204ENST00000469336 FAM181BA6NEQ2 426 aa10.46□□□□□ -0.73
UBE3C-204ENST00000469336 SOX11P35716 441 aa10.46□□□□□ -0.73
UBE3C-204ENST00000469336 POU4F2Q12837 409 aa10.46□□□□□ -0.73
UBE3C-204ENST00000469336 SV2AQ7L0J3 742 aa10.46□□□□□ -0.73
UBE3C-204ENST00000469336 CYP2U1Q7Z449 544 aa10.46□□□□□ -0.73
UBE3C-204ENST00000469336 CCDC82Q8N4S0 544 aa10.46□□□□□ -0.73
UBE3C-204ENST00000469336 GLMNQ92990 594 aa10.46□□□□□ -0.73
UBE3C-204ENST00000469336 STAU1O95793 577 aaKnown RBP10.45□□□□□ -0.74
UBE3C-204ENST00000469336 SLC27A3Q5K4L6 730 aa10.45□□□□□ -0.74
UBE3C-204ENST00000469336 CCDC125Q86Z20 511 aa10.45□□□□□ -0.74
UBE3C-204ENST00000469336 NLRP3Q96P20 1036 aa10.45□□□□□ -0.74
UBE3C-204ENST00000469336 CLN3Q13286 438 aa10.44□□□□□ -0.74
UBE3C-204ENST00000469336 PHTF2Q8N3S3 785 aa10.44□□□□□ -0.74
UBE3C-204ENST00000469336 ZNF592Q92610 1267 aa10.44□□□□□ -0.74
UBE3C-204ENST00000469336 ESF1Q9H501 851 aaKnown RBP10.44□□□□□ -0.74
UBE3C-204ENST00000469336 SERPINA10Q9UK55 444 aa10.44□□□□□ -0.74
UBE3C-204ENST00000469336 EIF4G2P78344 907 aaKnown RBP eCLIP10.43□□□□□ -0.74
UBE3C-204ENST00000469336 TRIM52Q96A61 297 aa10.43□□□□□ -0.74
UBE3C-204ENST00000469336 CCDC97Q96F63 343 aaPredicted RBP10.43□□□□□ -0.74
UBE3C-204ENST00000469336 CALR3Q96L12 384 aaKnown RBP10.43□□□□□ -0.74
UBE3C-204ENST00000469336 IL2RAP01589 272 aa10.42□□□□□ -0.74
UBE3C-204ENST00000469336 GPC1P35052 558 aa10.42□□□□□ -0.74
UBE3C-204ENST00000469336 ADAMTS19Q8TE59 1207 aa10.42□□□□□ -0.74
UBE3C-204ENST00000469336 WHAMMQ8TF30 809 aa10.42□□□□□ -0.74
UBE3C-204ENST00000469336 GRIP2Q9C0E4 1043 aa10.42□□□□□ -0.74
UBE3C-204ENST00000469336 ALG2Q9H553 416 aa10.42□□□□□ -0.74
UBE3C-204ENST00000469336 GPR25O00155 361 aa10.41□□□□□ -0.74
UBE3C-204ENST00000469336 GAS2L1Q99501 681 aaPredicted RBP10.41□□□□□ -0.74
UBE3C-204ENST00000469336 DBN1Q16643 649 aa10.4□□□□□ -0.74
UBE3C-204ENST00000469336 SLFNL1Q499Z3 407 aa10.4□□□□□ -0.74
UBE3C-204ENST00000469336 OXLD1Q5BKU9 147 aa10.4□□□□□ -0.74
UBE3C-204ENST00000469336 HDGFL1Q5TGJ6 251 aa10.4□□□□□ -0.74
UBE3C-204ENST00000469336 RIPOR1Q6ZS17 1223 aa10.4□□□□□ -0.74
UBE3C-204ENST00000469336 RNF135Q8IUD6 432 aa10.4□□□□□ -0.74
UBE3C-204ENST00000469336 CNKSR1Q969H4 720 aa10.4□□□□□ -0.74
UBE3C-204ENST00000469336 ARXQ96QS3 562 aa10.4□□□□□ -0.74
UBE3C-204ENST00000469336 ARID3AQ99856 593 aa10.4□□□□□ -0.74
UBE3C-204ENST00000469336 DOLKQ9UPQ8 538 aa10.4□□□□□ -0.74
UBE3C-204ENST00000469336 MYCP01106 439 aaPredicted RBP10.39□□□□□ -0.75
UBE3C-204ENST00000469336 CENPCQ03188 943 aa10.39□□□□□ -0.75
UBE3C-204ENST00000469336 GAS6Q14393 721 aa10.39□□□□□ -0.75
UBE3C-204ENST00000469336 NBPF10Q6P3W6 841 aaKnown RBP10.39□□□□□ -0.75
UBE3C-204ENST00000469336 NBPF15Q8N660 670 aa10.39□□□□□ -0.75
UBE3C-204ENST00000469336 ZNF837Q96EG3 531 aaPredicted RBP10.39□□□□□ -0.75
UBE3C-204ENST00000469336 GNRH1P01148 92 aa10.38□□□□□ -0.75
UBE3C-204ENST00000469336 ZNF385CQ66K41 422 aaPredicted RBP10.38□□□□□ -0.75
UBE3C-204ENST00000469336 ESYT1Q9BSJ8 1104 aa10.38□□□□□ -0.75
UBE3C-204ENST00000469336 PHKA2P46019 1235 aa10.37□□□□□ -0.75
UBE3C-204ENST00000469336 SEMA3FQ13275 785 aa10.37□□□□□ -0.75
UBE3C-204ENST00000469336 DYRK1BQ9Y463 629 aa10.36□□□□□ -0.75
UBE3C-204ENST00000469336 HRH3Q9Y5N1 445 aa10.36□□□□□ -0.75
UBE3C-204ENST00000469336 TRIM22Q8IYM9 498 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms