RNA–Protein interactions for RNA: ENST00000468915.5

SLC13A3-209, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5

Gene SLC13A3, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-209ENST00000468915 APAF1O14727 1248 aa19.72■□□□□ 0.75
SLC13A3-209ENST00000468915 THRAP3Q9Y2W1 955 aaKnown RBP19.72■□□□□ 0.75
SLC13A3-209ENST00000468915 IL2RBP14784 551 aa19.71■□□□□ 0.75
SLC13A3-209ENST00000468915 MTHFSDQ2M296 383 aaKnown RBP19.71■□□□□ 0.75
SLC13A3-209ENST00000468915 ONECUT3O60422 494 aaPredicted RBP19.7■□□□□ 0.74
SLC13A3-209ENST00000468915 RAPGEF4Q8WZA2 1011 aa19.7■□□□□ 0.74
SLC13A3-209ENST00000468915 CCDC9Q9Y3X0 531 aaKnown RBP19.7■□□□□ 0.74
SLC13A3-209ENST00000468915 TATP17735 454 aaPredicted RBP19.69■□□□□ 0.74
SLC13A3-209ENST00000468915 TMPOP42166 694 aaKnown RBP19.69■□□□□ 0.74
SLC13A3-209ENST00000468915 ZNF772Q68DY9 489 aaPredicted RBP19.69■□□□□ 0.74
SLC13A3-209ENST00000468915 POTEAQ6S8J7 498 aa19.69■□□□□ 0.74
SLC13A3-209ENST00000468915 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.69■□□□□ 0.741e-9■□□□□ 8.3
SLC13A3-209ENST00000468915 FAM98CQ17RN3 349 aaKnown RBP19.68■□□□□ 0.74
SLC13A3-209ENST00000468915 PNNQ9H307 717 aaKnown RBP19.68■□□□□ 0.74
SLC13A3-209ENST00000468915 RRP7AQ9Y3A4 280 aaKnown RBP19.68■□□□□ 0.74
SLC13A3-209ENST00000468915 VIRMAQ69YN4 1812 aaKnown RBP19.68■□□□□ 0.74
SLC13A3-209ENST00000468915 ADAMTS7Q9UKP4 1686 aa19.68■□□□□ 0.74
SLC13A3-209ENST00000468915 NFE2L2Q16236 605 aa19.67■□□□□ 0.74
SLC13A3-209ENST00000468915 PHF23Q9BUL5 403 aaPredicted RBP19.67■□□□□ 0.74
SLC13A3-209ENST00000468915 CYP27B1O15528 508 aa19.66■□□□□ 0.74
SLC13A3-209ENST00000468915 MAPK8IP3Q9UPT6 1336 aa19.66■□□□□ 0.74
SLC13A3-209ENST00000468915 TNS2Q63HR2 1409 aa19.66■□□□□ 0.74
SLC13A3-209ENST00000468915 TRIM35Q9UPQ4 493 aa19.66■□□□□ 0.74
SLC13A3-209ENST00000468915 BRWD3Q6RI45 1802 aa19.65■□□□□ 0.74
SLC13A3-209ENST00000468915 AMOTQ4VCS5 1084 aa19.65■□□□□ 0.74
SLC13A3-209ENST00000468915 PLEKHO1Q53GL0 409 aaPredicted RBP19.65■□□□□ 0.74
SLC13A3-209ENST00000468915 CDCA7Q9BWT1 371 aaPredicted RBP19.65■□□□□ 0.74
SLC13A3-209ENST00000468915 ZCRB1Q8TBF4 217 aaKnown RBP19.64■□□□□ 0.73
SLC13A3-209ENST00000468915 ZNF521Q96K83 1311 aa19.63■□□□□ 0.73
SLC13A3-209ENST00000468915 SCN11AQ9UI33 1791 aa19.63■□□□□ 0.73
SLC13A3-209ENST00000468915 RBM6P78332 1123 aaKnown RBP19.62■□□□□ 0.73
SLC13A3-209ENST00000468915 NCBP3Q53F19 620 aaKnown RBP19.62■□□□□ 0.73
SLC13A3-209ENST00000468915 ZNF530Q6P9A1 599 aaPredicted RBP19.62■□□□□ 0.73
SLC13A3-209ENST00000468915 GAS2L2Q8NHY3 880 aa19.62■□□□□ 0.73
SLC13A3-209ENST00000468915 TOGARAM1Q9Y4F4 1720 aa19.62■□□□□ 0.73
SLC13A3-209ENST00000468915 PHKG2P15735 406 aa19.61■□□□□ 0.73
SLC13A3-209ENST00000468915 RIPK4P57078 832 aa19.61■□□□□ 0.73
SLC13A3-209ENST00000468915 HNRNPUQ00839 825 aaKnown RBP eCLIP19.61■□□□□ 0.732e-6■■■□□ 16.8
SLC13A3-209ENST00000468915 NEUROD2Q15784 382 aa19.61■□□□□ 0.73
SLC13A3-209ENST00000468915 SPG7Q9UQ90 795 aa19.61■□□□□ 0.73
SLC13A3-209ENST00000468915 KDM6AO15550 1401 aaPredicted RBP19.61■□□□□ 0.73
SLC13A3-209ENST00000468915 MAP3K5Q99683 1374 aa19.61■□□□□ 0.73
SLC13A3-209ENST00000468915 CCDC27Q2M243 656 aa19.6■□□□□ 0.73
SLC13A3-209ENST00000468915 SALL2Q9Y467 1007 aaPredicted RBP19.6■□□□□ 0.73
SLC13A3-209ENST00000468915 PCDH11XQ9BZA7 1347 aa19.59■□□□□ 0.73
SLC13A3-209ENST00000468915 PCDH11YQ9BZA8 1340 aa19.59■□□□□ 0.73
SLC13A3-209ENST00000468915 EXOC5O00471 708 aa19.59■□□□□ 0.73
SLC13A3-209ENST00000468915 DCTN1Q14203 1278 aa19.59■□□□□ 0.73
SLC13A3-209ENST00000468915 NKX1-1Q15270 411 aaPredicted RBP19.59■□□□□ 0.73
SLC13A3-209ENST00000468915 DDB1Q16531 1140 aa19.59■□□□□ 0.73
SLC13A3-209ENST00000468915 AKAP4Q5JQC9 854 aa19.59■□□□□ 0.73
SLC13A3-209ENST00000468915 SEPT12Q8IYM1 358 aa19.59■□□□□ 0.73
SLC13A3-209ENST00000468915 MARCH10Q8NA82 808 aaPredicted RBP19.59■□□□□ 0.73
SLC13A3-209ENST00000468915 IL17REQ8NFR9 667 aa19.59■□□□□ 0.73
SLC13A3-209ENST00000468915 SIPA1L3O60292 1781 aaPredicted RBP19.58■□□□□ 0.73
SLC13A3-209ENST00000468915 NEFMP07197 916 aa19.58■□□□□ 0.73
SLC13A3-209ENST00000468915 WWC1Q8IX03 1113 aa19.58■□□□□ 0.73
SLC13A3-209ENST00000468915 IFNL2Q8IZJ0 200 aa19.58■□□□□ 0.73
SLC13A3-209ENST00000468915 THUMPD2Q9BTF0 503 aaKnown RBP19.58■□□□□ 0.73
SLC13A3-209ENST00000468915 LGR6Q9HBX8 967 aa19.58■□□□□ 0.73
SLC13A3-209ENST00000468915 RGS12O14924 1447 aa19.58■□□□□ 0.72
SLC13A3-209ENST00000468915 CEMIPQ8WUJ3 1361 aa19.58■□□□□ 0.72
SLC13A3-209ENST00000468915 GNAT3A8MTJ3 354 aa19.57■□□□□ 0.72
SLC13A3-209ENST00000468915 DDX54Q8TDD1 881 aaKnown RBP19.57■□□□□ 0.72
SLC13A3-209ENST00000468915 YTHDC1Q96MU7 727 aaKnown RBP19.57■□□□□ 0.72
SLC13A3-209ENST00000468915 HTATSF1O43719 755 aaKnown RBP19.56■□□□□ 0.72
SLC13A3-209ENST00000468915 RXRBP28702 533 aa19.56■□□□□ 0.72
SLC13A3-209ENST00000468915 MPRIPQ6WCQ1 1025 aa19.56■□□□□ 0.72
SLC13A3-209ENST00000468915 MCM10Q7L590 875 aa19.56■□□□□ 0.72
SLC13A3-209ENST00000468915 NGEFQ8N5V2 710 aa19.56■□□□□ 0.72
SLC13A3-209ENST00000468915 ZBED9Q6R2W3 1325 aa19.55■□□□□ 0.72
SLC13A3-209ENST00000468915 MRC1P22897 1456 aa19.54■□□□□ 0.72
SLC13A3-209ENST00000468915 RNMTO43148 476 aaKnown RBP19.54■□□□□ 0.72
SLC13A3-209ENST00000468915 C1orf141Q5JVX7 400 aa19.54■□□□□ 0.72
SLC13A3-209ENST00000468915 DOT1LQ8TEK3 1739 aa19.54■□□□□ 0.72
SLC13A3-209ENST00000468915 SPINK5Q9NQ38 1064 aaPredicted RBP19.54■□□□□ 0.72
SLC13A3-209ENST00000468915 ITGB4P16144 1822 aa19.54■□□□□ 0.72
SLC13A3-209ENST00000468915 SBF2Q86WG5 1849 aa19.52■□□□□ 0.72
SLC13A3-209ENST00000468915 DCAF5Q96JK2 942 aa19.52■□□□□ 0.71
SLC13A3-209ENST00000468915 FAM182BQ5T319 152 aa19.51■□□□□ 0.71
SLC13A3-209ENST00000468915 BCL9O00512 1426 aa19.51■□□□□ 0.71
SLC13A3-209ENST00000468915 A0A0G2JS52 829 aa19.5■□□□□ 0.71
SLC13A3-209ENST00000468915 MYT1Q01538 1121 aa19.5■□□□□ 0.71
SLC13A3-209ENST00000468915 LMOD3Q0VAK6 560 aa19.5■□□□□ 0.71
SLC13A3-209ENST00000468915 CDCA7LQ96GN5 454 aa19.5■□□□□ 0.71
SLC13A3-209ENST00000468915 ZNF853P0CG23 659 aa19.49■□□□□ 0.71
SLC13A3-209ENST00000468915 WDR63Q8IWG1 891 aa19.49■□□□□ 0.71
SLC13A3-209ENST00000468915 EP400Q96L91 3159 aa19.49■□□□□ 0.71
SLC13A3-209ENST00000468915 HSP90AB1P08238 724 aaKnown RBP19.49■□□□□ 0.71
SLC13A3-209ENST00000468915 PDE3BQ13370 1112 aa19.49■□□□□ 0.71
SLC13A3-209ENST00000468915 RTF1Q92541 710 aaKnown RBP19.49■□□□□ 0.71
SLC13A3-209ENST00000468915 KDM3BQ7LBC6 1761 aa19.48■□□□□ 0.71
SLC13A3-209ENST00000468915 KRT27Q7Z3Y8 459 aa19.47■□□□□ 0.71
SLC13A3-209ENST00000468915 TRMT2AQ8IZ69 625 aaKnown RBP19.47■□□□□ 0.71
SLC13A3-209ENST00000468915 IL16Q14005 1332 aa19.47■□□□□ 0.71
SLC13A3-209ENST00000468915 PAPPAQ13219 1627 aa19.46■□□□□ 0.71
SLC13A3-209ENST00000468915 ERVV-2B6SEH9 535 aa19.46■□□□□ 0.71
SLC13A3-209ENST00000468915 SLC52A2Q9HAB3 445 aa19.46■□□□□ 0.71
SLC13A3-209ENST00000468915 NHSQ6T4R5 1651 aa19.46■□□□□ 0.71
SLC13A3-209ENST00000468915 KAT6BQ8WYB5 2073 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms