RNA–Protein interactions for RNA: ENST00000468164.1

C9orf3-212, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-212ENST00000468164 STK32BQ9NY57 414 aa18.6■□□□□ 0.57
C9orf3-212ENST00000468164 HSPA5P11021 654 aaKnown RBP18.59■□□□□ 0.57
C9orf3-212ENST00000468164 EIF4G2P78344 907 aaKnown RBP eCLIP18.59■□□□□ 0.57
C9orf3-212ENST00000468164 SPON1Q9HCB6 807 aa18.59■□□□□ 0.57
C9orf3-212ENST00000468164 FLT4P35916 1363 aa18.58■□□□□ 0.57
C9orf3-212ENST00000468164 PDGFDQ9GZP0 370 aaPredicted RBP18.58■□□□□ 0.56
C9orf3-212ENST00000468164 ZCRB1Q8TBF4 217 aaKnown RBP18.57■□□□□ 0.56
C9orf3-212ENST00000468164 RAPGEF4Q8WZA2 1011 aa18.57■□□□□ 0.56
C9orf3-212ENST00000468164 EMILIN1Q9Y6C2 1016 aa18.57■□□□□ 0.56
C9orf3-212ENST00000468164 ITGB4P16144 1822 aa18.56■□□□□ 0.56
C9orf3-212ENST00000468164 INSRP06213 1382 aa18.55■□□□□ 0.56
C9orf3-212ENST00000468164 CGNL1Q0VF96 1302 aa18.55■□□□□ 0.56
C9orf3-212ENST00000468164 LY75O60449 1722 aa18.55■□□□□ 0.56
C9orf3-212ENST00000468164 ZBTB7AO95365 584 aa18.55■□□□□ 0.56
C9orf3-212ENST00000468164 TNNT2P45379 298 aaPredicted RBP18.55■□□□□ 0.56
C9orf3-212ENST00000468164 SLC15A2Q16348 729 aa18.55■□□□□ 0.56
C9orf3-212ENST00000468164 TUBGCP6Q96RT7 1819 aa18.55■□□□□ 0.56
C9orf3-212ENST00000468164 PAPPAQ13219 1627 aa18.54■□□□□ 0.56
C9orf3-212ENST00000468164 TATP17735 454 aaPredicted RBP18.54■□□□□ 0.56
C9orf3-212ENST00000468164 PRIM1P49642 420 aaKnown RBP18.53■□□□□ 0.56
C9orf3-212ENST00000468164 ATF5Q9Y2D1 282 aaPredicted RBP18.53■□□□□ 0.56
C9orf3-212ENST00000468164 KIF24Q5T7B8 1368 aa18.52■□□□□ 0.55
C9orf3-212ENST00000468164 PKD1L3Q7Z443 1732 aa18.52■□□□□ 0.55
C9orf3-212ENST00000468164 QSER1Q2KHR3 1735 aa18.5■□□□□ 0.55
C9orf3-212ENST00000468164 KCNQ4P56696 695 aa18.5■□□□□ 0.55
C9orf3-212ENST00000468164 PANK3Q9H999 370 aa18.5■□□□□ 0.55
C9orf3-212ENST00000468164 TOGARAM1Q9Y4F4 1720 aa18.49■□□□□ 0.55
C9orf3-212ENST00000468164 LRRC4BQ9NT99 713 aa18.49■□□□□ 0.55
C9orf3-212ENST00000468164 ZNF827Q17R98 1081 aa18.48■□□□□ 0.55
C9orf3-212ENST00000468164 PCDH11XQ9BZA7 1347 aa18.48■□□□□ 0.55
C9orf3-212ENST00000468164 PCDH11YQ9BZA8 1340 aa18.48■□□□□ 0.55
C9orf3-212ENST00000468164 TAF1LQ8IZX4 1826 aa18.47■□□□□ 0.55
C9orf3-212ENST00000468164 C5P01031 1676 aa18.47■□□□□ 0.55
C9orf3-212ENST00000468164 NSD2O96028 1365 aa18.46■□□□□ 0.55
C9orf3-212ENST00000468164 WASHC2AQ641Q2 1341 aa18.46■□□□□ 0.55
C9orf3-212ENST00000468164 POLKQ9UBT6 870 aa18.45■□□□□ 0.54
C9orf3-212ENST00000468164 SLC27A3Q5K4L6 730 aa18.44■□□□□ 0.54
C9orf3-212ENST00000468164 MTFR1LQ9H019 292 aa18.44■□□□□ 0.54
C9orf3-212ENST00000468164 CCNL1Q9UK58 526 aaPredicted RBP18.44■□□□□ 0.54
C9orf3-212ENST00000468164 DCAF8L1A6NGE4 600 aa18.43■□□□□ 0.54
C9orf3-212ENST00000468164 PTGER2P43116 358 aa18.43■□□□□ 0.54
C9orf3-212ENST00000468164 MPRIPQ6WCQ1 1025 aa18.43■□□□□ 0.54
C9orf3-212ENST00000468164 EYA1Q99502 592 aa18.43■□□□□ 0.54
C9orf3-212ENST00000468164 CYP27B1O15528 508 aa18.42■□□□□ 0.54
C9orf3-212ENST00000468164 TFCP2L1Q9NZI6 479 aa18.42■□□□□ 0.54
C9orf3-212ENST00000468164 MORC1Q86VD1 984 aa18.41■□□□□ 0.54
C9orf3-212ENST00000468164 AKT1S1Q96B36 256 aa18.41■□□□□ 0.54
C9orf3-212ENST00000468164 SPG7Q9UQ90 795 aa18.41■□□□□ 0.54
C9orf3-212ENST00000468164 MSH5O43196 834 aa18.4■□□□□ 0.54
C9orf3-212ENST00000468164 EIF4A2Q14240 407 aaKnown RBP18.4■□□□□ 0.54
C9orf3-212ENST00000468164 KLHL34Q8N239 644 aa18.39■□□□□ 0.53
C9orf3-212ENST00000468164 KNSTRNQ9Y448 316 aa18.39■□□□□ 0.53
C9orf3-212ENST00000468164 NCAPD2Q15021 1401 aa18.39■□□□□ 0.53
C9orf3-212ENST00000468164 FHDC1Q9C0D6 1143 aaPredicted RBP18.38■□□□□ 0.53
C9orf3-212ENST00000468164 PNPLA7Q6ZV29 1317 aa18.38■□□□□ 0.53
C9orf3-212ENST00000468164 VIRMAQ69YN4 1812 aaKnown RBP18.37■□□□□ 0.53
C9orf3-212ENST00000468164 ARXQ96QS3 562 aa18.37■□□□□ 0.53
C9orf3-212ENST00000468164 KIF7Q2M1P5 1343 aa18.37■□□□□ 0.53
C9orf3-212ENST00000468164 PALLDQ8WX93 1383 aa18.37■□□□□ 0.53
C9orf3-212ENST00000468164 COL24A1Q17RW2 1714 aa18.36■□□□□ 0.53
C9orf3-212ENST00000468164 CHD4Q14839 1912 aa18.35■□□□□ 0.53
C9orf3-212ENST00000468164 C4BP0C0L5 1744 aa18.35■□□□□ 0.53
C9orf3-212ENST00000468164 CNGB1Q14028 1251 aaPredicted RBP18.34■□□□□ 0.53
C9orf3-212ENST00000468164 IFNL2Q8IZJ0 200 aa18.34■□□□□ 0.53
C9orf3-212ENST00000468164 SGIP1Q9BQI5 828 aa18.34■□□□□ 0.53
C9orf3-212ENST00000468164 SYT17Q9BSW7 474 aa18.34■□□□□ 0.53
C9orf3-212ENST00000468164 UBR3Q6ZT12 1888 aa18.34■□□□□ 0.53
C9orf3-212ENST00000468164 POLD1P28340 1107 aa18.33■□□□□ 0.52
C9orf3-212ENST00000468164 PIGBQ92521 554 aa18.33■□□□□ 0.52
C9orf3-212ENST00000468164 TMOD3Q9NYL9 352 aa18.33■□□□□ 0.52
C9orf3-212ENST00000468164 IGSF1Q8N6C5 1336 aa18.32■□□□□ 0.52
C9orf3-212ENST00000468164 PHKG2P15735 406 aa18.32■□□□□ 0.52
C9orf3-212ENST00000468164 YY1P25490 414 aa18.32■□□□□ 0.52
C9orf3-212ENST00000468164 SLC16A10Q8TF71 515 aa18.32■□□□□ 0.52
C9orf3-212ENST00000468164 SMARCC1Q92922 1105 aaPredicted RBP18.32■□□□□ 0.52
C9orf3-212ENST00000468164 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.32■□□□□ 0.52
C9orf3-212ENST00000468164 NKX1-1Q15270 411 aaPredicted RBP18.31■□□□□ 0.52
C9orf3-212ENST00000468164 COL23A1Q86Y22 540 aaPredicted RBP18.3■□□□□ 0.52
C9orf3-212ENST00000468164 CC2D1BQ5T0F9 858 aaKnown RBP18.29■□□□□ 0.52
C9orf3-212ENST00000468164 MSL1Q68DK7 614 aa18.29■□□□□ 0.52
C9orf3-212ENST00000468164 AEBP1Q8IUX7 1158 aa18.29■□□□□ 0.52
C9orf3-212ENST00000468164 AK7Q96M32 723 aa18.29■□□□□ 0.52
C9orf3-212ENST00000468164 UTRNP46939 3433 aa18.29■□□□□ 0.52
C9orf3-212ENST00000468164 SCN11AQ9UI33 1791 aa18.28■□□□□ 0.52
C9orf3-212ENST00000468164 PLEKHO1Q53GL0 409 aaPredicted RBP18.28■□□□□ 0.52
C9orf3-212ENST00000468164 AMER1Q5JTC6 1135 aaPredicted RBP18.28■□□□□ 0.52
C9orf3-212ENST00000468164 ZNF530Q6P9A1 599 aaPredicted RBP18.28■□□□□ 0.52
C9orf3-212ENST00000468164 ASAP1Q9ULH1 1129 aa18.28■□□□□ 0.52
C9orf3-212ENST00000468164 PHF14O94880 888 aa18.27■□□□□ 0.52
C9orf3-212ENST00000468164 SULT6B1Q6IMI4 303 aa18.27■□□□□ 0.52
C9orf3-212ENST00000468164 SMIM5Q71RC9 77 aa18.26■□□□□ 0.51
C9orf3-212ENST00000468164 PELP1Q8IZL8 1130 aaKnown RBP18.26■□□□□ 0.51
C9orf3-212ENST00000468164 GOLGB1Q14789 3259 aaKnown RBP18.25■□□□□ 0.51
C9orf3-212ENST00000468164 LOC102724428A0A0B4J2F2 783 aa18.25■□□□□ 0.51
C9orf3-212ENST00000468164 HMGB2P26583 209 aaKnown RBP18.25■□□□□ 0.51
C9orf3-212ENST00000468164 SIK1P57059 783 aa18.25■□□□□ 0.51
C9orf3-212ENST00000468164 COL5A3P25940 1745 aaPredicted RBP18.24■□□□□ 0.51
C9orf3-212ENST00000468164 ATP6V1AP38606 617 aa18.24■□□□□ 0.51
C9orf3-212ENST00000468164 MTHFSP49914 203 aa18.24■□□□□ 0.51
C9orf3-212ENST00000468164 C1orf141Q5JVX7 400 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms