RNA–Protein interactions for RNA: ENST00000467931.1

COL1A2-204, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 713 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-204ENST00000467931 TRIM26Q12899 539 aaPredicted RBP26.49■■□□□ 1.83
COL1A2-204ENST00000467931 ZCRB1Q8TBF4 217 aaKnown RBP26.48■■□□□ 1.83
COL1A2-204ENST00000467931 CHD4Q14839 1912 aa26.46■■□□□ 1.83
COL1A2-204ENST00000467931 FYB1O15117 783 aa26.46■■□□□ 1.83
COL1A2-204ENST00000467931 PRIM1P49642 420 aaKnown RBP26.46■■□□□ 1.83
COL1A2-204ENST00000467931 SLC27A3Q5K4L6 730 aa26.46■■□□□ 1.83
COL1A2-204ENST00000467931 USHBP1Q8N6Y0 703 aa26.46■■□□□ 1.83
COL1A2-204ENST00000467931 SYT17Q9BSW7 474 aa26.46■■□□□ 1.83
COL1A2-204ENST00000467931 ARXQ96QS3 562 aa26.45■■□□□ 1.82
COL1A2-204ENST00000467931 CDCA8Q53HL2 280 aa26.44■■□□□ 1.82
COL1A2-204ENST00000467931 SGIP1Q9BQI5 828 aa26.44■■□□□ 1.82
COL1A2-204ENST00000467931 KCNQ4P56696 695 aa26.43■■□□□ 1.82
COL1A2-204ENST00000467931 NBPF6Q5VWK0 638 aa26.42■■□□□ 1.82
COL1A2-204ENST00000467931 RAPGEF4Q8WZA2 1011 aa26.42■■□□□ 1.82
COL1A2-204ENST00000467931 AKT1S1Q96B36 256 aa26.42■■□□□ 1.82
COL1A2-204ENST00000467931 NBPF4Q96M43 638 aa26.42■■□□□ 1.82
COL1A2-204ENST00000467931 TFCP2L1Q9NZI6 479 aa26.41■■□□□ 1.82
COL1A2-204ENST00000467931 KLHL34Q8N239 644 aa26.4■■□□□ 1.82
COL1A2-204ENST00000467931 NSD2O96028 1365 aa26.4■■□□□ 1.82
COL1A2-204ENST00000467931 FLT4P35916 1363 aa26.38■■□□□ 1.81
COL1A2-204ENST00000467931 TATP17735 454 aaPredicted RBP26.38■■□□□ 1.81
COL1A2-204ENST00000467931 CGNL1Q0VF96 1302 aa26.38■■□□□ 1.81
COL1A2-204ENST00000467931 COL24A1Q17RW2 1714 aa26.37■■□□□ 1.81
COL1A2-204ENST00000467931 POLD1P28340 1107 aa26.37■■□□□ 1.81
COL1A2-204ENST00000467931 CCNL1Q9UK58 526 aaPredicted RBP26.37■■□□□ 1.81
COL1A2-204ENST00000467931 PNPLA7Q6ZV29 1317 aa26.37■■□□□ 1.81
COL1A2-204ENST00000467931 INSRP06213 1382 aa26.36■■□□□ 1.81
COL1A2-204ENST00000467931 C5P01031 1676 aa26.36■■□□□ 1.81
COL1A2-204ENST00000467931 HSP90AB2PQ58FF8 381 aa26.36■■□□□ 1.81
COL1A2-204ENST00000467931 SLC16A10Q8TF71 515 aa26.36■■□□□ 1.81
COL1A2-204ENST00000467931 NSD3Q9BZ95 1437 aa26.36■■□□□ 1.81
COL1A2-204ENST00000467931 UTRNP46939 3433 aa26.36■■□□□ 1.81
COL1A2-204ENST00000467931 MAP2P11137 1827 aaKnown RBP26.35■■□□□ 1.81
COL1A2-204ENST00000467931 MAP3K5Q99683 1374 aa26.34■■□□□ 1.81
COL1A2-204ENST00000467931 ITGB4P16144 1822 aa26.34■■□□□ 1.81
COL1A2-204ENST00000467931 MSH5O43196 834 aa26.33■■□□□ 1.81
COL1A2-204ENST00000467931 PCDH11XQ9BZA7 1347 aa26.33■■□□□ 1.81
COL1A2-204ENST00000467931 PCDH11YQ9BZA8 1340 aa26.33■■□□□ 1.81
COL1A2-204ENST00000467931 TAF1LQ8IZX4 1826 aa26.32■■□□□ 1.8
COL1A2-204ENST00000467931 KIF24Q5T7B8 1368 aa26.32■■□□□ 1.8
COL1A2-204ENST00000467931 PKD1L3Q7Z443 1732 aa26.31■■□□□ 1.8
COL1A2-204ENST00000467931 ANKRD26Q9UPS8 1709 aa26.31■■□□□ 1.8
COL1A2-204ENST00000467931 TOGARAM1Q9Y4F4 1720 aa26.31■■□□□ 1.8
COL1A2-204ENST00000467931 PPM1GO15355 546 aaPredicted RBP26.3■■□□□ 1.8
COL1A2-204ENST00000467931 GPR162Q16538 588 aa26.3■■□□□ 1.8
COL1A2-204ENST00000467931 EMILIN1Q9Y6C2 1016 aa26.3■■□□□ 1.8
COL1A2-204ENST00000467931 CARD14Q9BXL6 1004 aa26.29■■□□□ 1.8
COL1A2-204ENST00000467931 PELP1Q8IZL8 1130 aaKnown RBP26.28■■□□□ 1.8
COL1A2-204ENST00000467931 POLR3GLQ9BT43 218 aa26.28■■□□□ 1.8
COL1A2-204ENST00000467931 ZNF784Q8NCA9 323 aaPredicted RBP26.27■■□□□ 1.8
COL1A2-204ENST00000467931 MPRIPQ6WCQ1 1025 aa26.26■■□□□ 1.79
COL1A2-204ENST00000467931 PALLDQ8WX93 1383 aa26.24■■□□□ 1.79
COL1A2-204ENST00000467931 CYP27B1O15528 508 aa26.23■■□□□ 1.79
COL1A2-204ENST00000467931 PCGF6Q9BYE7 350 aa26.23■■□□□ 1.79
COL1A2-204ENST00000467931 COL23A1Q86Y22 540 aaPredicted RBP26.22■■□□□ 1.79
COL1A2-204ENST00000467931 TIMELESSQ9UNS1 1208 aa26.22■■□□□ 1.79
COL1A2-204ENST00000467931 MSL1Q68DK7 614 aa26.21■■□□□ 1.79
COL1A2-204ENST00000467931 C4BP0C0L5 1744 aa26.21■■□□□ 1.79
COL1A2-204ENST00000467931 NLGN2Q8NFZ4 835 aa26.2■■□□□ 1.78
COL1A2-204ENST00000467931 GOLGB1Q14789 3259 aaKnown RBP26.19■■□□□ 1.78
COL1A2-204ENST00000467931 HMGB2P26583 209 aaKnown RBP26.18■■□□□ 1.78
COL1A2-204ENST00000467931 SPG7Q9UQ90 795 aa26.18■■□□□ 1.78
COL1A2-204ENST00000467931 UBR3Q6ZT12 1888 aa26.17■■□□□ 1.78
COL1A2-204ENST00000467931 NCAPD2Q15021 1401 aa26.17■■□□□ 1.78
COL1A2-204ENST00000467931 SMARCC1Q92922 1105 aaPredicted RBP26.17■■□□□ 1.78
COL1A2-204ENST00000467931 WASHC2AQ641Q2 1341 aa26.16■■□□□ 1.78
COL1A2-204ENST00000467931 TNNT2P45379 298 aaPredicted RBP26.16■■□□□ 1.78
COL1A2-204ENST00000467931 AK7Q96M32 723 aa26.15■■□□□ 1.78
COL1A2-204ENST00000467931 CLSPNQ9HAW4 1339 aa26.14■■□□□ 1.78
COL1A2-204ENST00000467931 FLAD1Q8NFF5 587 aa26.14■■□□□ 1.78
COL1A2-204ENST00000467931 EYA1Q99502 592 aa26.14■■□□□ 1.78
COL1A2-204ENST00000467931 PIGBQ92521 554 aa26.13■■□□□ 1.77
COL1A2-204ENST00000467931 POLKQ9UBT6 870 aa26.12■■□□□ 1.77
COL1A2-204ENST00000467931 PHF14O94880 888 aa26.11■■□□□ 1.77
COL1A2-204ENST00000467931 TMOD3Q9NYL9 352 aa26.11■■□□□ 1.77
COL1A2-204ENST00000467931 NKX1-1Q15270 411 aaPredicted RBP26.1■■□□□ 1.77
COL1A2-204ENST00000467931 EIF4G2P78344 907 aaKnown RBP eCLIP26.07■■□□□ 1.76
COL1A2-204ENST00000467931 EIF4A2Q14240 407 aaKnown RBP26.07■■□□□ 1.76
COL1A2-204ENST00000467931 IFNL2Q8IZJ0 200 aa26.07■■□□□ 1.76
COL1A2-204ENST00000467931 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.07■■□□□ 1.76
COL1A2-204ENST00000467931 LOC102724428A0A0B4J2F2 783 aa26.06■■□□□ 1.76
COL1A2-204ENST00000467931 PHKG2P15735 406 aa26.06■■□□□ 1.76
COL1A2-204ENST00000467931 YBX3P16989 372 aaKnown RBP eCLIP26.06■■□□□ 1.76
COL1A2-204ENST00000467931 SIK1P57059 783 aa26.06■■□□□ 1.76
COL1A2-204ENST00000467931 GRIN3BO60391 1043 aa26.05■■□□□ 1.76
COL1A2-204ENST00000467931 SMIM5Q71RC9 77 aa26.05■■□□□ 1.76
COL1A2-204ENST00000467931 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.04■■□□□ 1.76
COL1A2-204ENST00000467931 HSPA5P11021 654 aaKnown RBP26.04■■□□□ 1.76
COL1A2-204ENST00000467931 AMIGO3Q86WK7 504 aa26.03■■□□□ 1.76
COL1A2-204ENST00000467931 LINC00116Q8NCU8 138 aa26.03■■□□□ 1.76
COL1A2-204ENST00000467931 ASAP1Q9ULH1 1129 aa26.03■■□□□ 1.76
COL1A2-204ENST00000467931 CD2APQ9Y5K6 639 aa26.03■■□□□ 1.76
COL1A2-204ENST00000467931 PANK3Q9H999 370 aa26.02■■□□□ 1.76
COL1A2-204ENST00000467931 SENP3-EIF4A1A0A087X0R7 540 aa26.01■■□□□ 1.75
COL1A2-204ENST00000467931 ATP6V1AP38606 617 aa26.01■■□□□ 1.75
COL1A2-204ENST00000467931 C1QTNF8P60827 252 aa26.01■■□□□ 1.75
COL1A2-204ENST00000467931 GNPATO15228 680 aa26■■□□□ 1.75
COL1A2-204ENST00000467931 GIGYF1O75420 1035 aaPredicted RBP26■■□□□ 1.75
COL1A2-204ENST00000467931 SSFA2P28290 1259 aa26■■□□□ 1.75
COL1A2-204ENST00000467931 IGSF1Q8N6C5 1336 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms