RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 ZCRB1Q8TBF4 217 aaKnown RBP16.4■□□□□ 0.22
CTNS-205ENST00000467663 PANK3Q9H999 370 aa16.4■□□□□ 0.22
CTNS-205ENST00000467663 ANP32CO43423 234 aa16.39■□□□□ 0.21
CTNS-205ENST00000467663 USHBP1Q8N6Y0 703 aa16.39■□□□□ 0.21
CTNS-205ENST00000467663 RGPD2P0DJD1 1756 aa16.38■□□□□ 0.21
CTNS-205ENST00000467663 ANO8Q9HCE9 1232 aaPredicted RBP16.38■□□□□ 0.21
CTNS-205ENST00000467663 POLKQ9UBT6 870 aa16.38■□□□□ 0.21
CTNS-205ENST00000467663 RAPGEF4Q8WZA2 1011 aa16.37■□□□□ 0.21
CTNS-205ENST00000467663 PPM1GO15355 546 aaPredicted RBP16.36■□□□□ 0.21
CTNS-205ENST00000467663 TATP17735 454 aaPredicted RBP16.36■□□□□ 0.21
CTNS-205ENST00000467663 ANKRD26Q9UPS8 1709 aa16.36■□□□□ 0.21
CTNS-205ENST00000467663 NSD2O96028 1365 aa16.35■□□□□ 0.21
CTNS-205ENST00000467663 NCAPD2Q15021 1401 aa16.35■□□□□ 0.21
CTNS-205ENST00000467663 PRIM1P49642 420 aaKnown RBP16.34■□□□□ 0.21
CTNS-205ENST00000467663 SHANK3Q9BYB0 1731 aa16.33■□□□□ 0.21
CTNS-205ENST00000467663 SLC15A2Q16348 729 aa16.33■□□□□ 0.2
CTNS-205ENST00000467663 STK32BQ9NY57 414 aa16.33■□□□□ 0.2
CTNS-205ENST00000467663 BTAF1O14981 1849 aa16.33■□□□□ 0.2
CTNS-205ENST00000467663 TNNT2P45379 298 aaPredicted RBP16.32■□□□□ 0.2
CTNS-205ENST00000467663 EYA1Q99502 592 aa16.32■□□□□ 0.2
CTNS-205ENST00000467663 SPON1Q9HCB6 807 aa16.32■□□□□ 0.2
CTNS-205ENST00000467663 MAP2P11137 1827 aaKnown RBP16.31■□□□□ 0.2
CTNS-205ENST00000467663 NPC1L1Q9UHC9 1359 aa16.31■□□□□ 0.2
CTNS-205ENST00000467663 PCDH11XQ9BZA7 1347 aa16.31■□□□□ 0.2
CTNS-205ENST00000467663 PCDH11YQ9BZA8 1340 aa16.31■□□□□ 0.2
CTNS-205ENST00000467663 LRRC4BQ9NT99 713 aa16.31■□□□□ 0.2
CTNS-205ENST00000467663 CCER2I3L3R5 266 aa16.3■□□□□ 0.2
CTNS-205ENST00000467663 SLC27A3Q5K4L6 730 aa16.3■□□□□ 0.2
CTNS-205ENST00000467663 MIER1Q8N108 512 aa16.3■□□□□ 0.2
CTNS-205ENST00000467663 SYTL4Q96C24 671 aaPredicted RBP16.3■□□□□ 0.2
CTNS-205ENST00000467663 KNSTRNQ9Y448 316 aa16.3■□□□□ 0.2
CTNS-205ENST00000467663 CYP27B1O15528 508 aa16.29■□□□□ 0.2
CTNS-205ENST00000467663 PER1O15534 1290 aaPredicted RBP16.29■□□□□ 0.2
CTNS-205ENST00000467663 EIF4A2Q14240 407 aaKnown RBP16.29■□□□□ 0.2
CTNS-205ENST00000467663 MORC1Q86VD1 984 aa16.29■□□□□ 0.2
CTNS-205ENST00000467663 PDGFDQ9GZP0 370 aaPredicted RBP16.29■□□□□ 0.2
CTNS-205ENST00000467663 PAPPAQ13219 1627 aa16.29■□□□□ 0.2
CTNS-205ENST00000467663 CASZ1Q86V15 1759 aa16.28■□□□□ 0.2
CTNS-205ENST00000467663 DOT1LQ8TEK3 1739 aa16.28■□□□□ 0.2
CTNS-205ENST00000467663 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.28■□□□□ 0.2
CTNS-205ENST00000467663 RALBP1Q15311 655 aa16.27■□□□□ 0.2
CTNS-205ENST00000467663 AMER1Q5JTC6 1135 aaPredicted RBP16.27■□□□□ 0.2
CTNS-205ENST00000467663 SPG7Q9UQ90 795 aa16.27■□□□□ 0.2
CTNS-205ENST00000467663 KAT6BQ8WYB5 2073 aa16.26■□□□□ 0.19
CTNS-205ENST00000467663 PLEKHG2Q9H7P9 1386 aa16.26■□□□□ 0.19
CTNS-205ENST00000467663 NKX1-1Q15270 411 aaPredicted RBP16.26■□□□□ 0.19
CTNS-205ENST00000467663 ZNF827Q17R98 1081 aa16.26■□□□□ 0.19
CTNS-205ENST00000467663 AKT1S1Q96B36 256 aa16.26■□□□□ 0.19
CTNS-205ENST00000467663 PRKRIP1Q9H875 184 aaPredicted RBP16.26■□□□□ 0.19
CTNS-205ENST00000467663 PKD1L3Q7Z443 1732 aa16.25■□□□□ 0.19
CTNS-205ENST00000467663 IGSF1Q8N6C5 1336 aa16.25■□□□□ 0.19
CTNS-205ENST00000467663 ZBTB7AO95365 584 aa16.24■□□□□ 0.19
CTNS-205ENST00000467663 PTGER2P43116 358 aa16.23■□□□□ 0.19
CTNS-205ENST00000467663 MTFR1LQ9H019 292 aa16.23■□□□□ 0.19
CTNS-205ENST00000467663 PPP1R1BQ9UD71 204 aaPredicted RBP16.23■□□□□ 0.19
CTNS-205ENST00000467663 LY75O60449 1722 aa16.22■□□□□ 0.19
CTNS-205ENST00000467663 KCNQ4P56696 695 aa16.22■□□□□ 0.19
CTNS-205ENST00000467663 MPRIPQ6WCQ1 1025 aa16.22■□□□□ 0.19
CTNS-205ENST00000467663 CCNL1Q9UK58 526 aaPredicted RBP16.22■□□□□ 0.19
CTNS-205ENST00000467663 PHKG2P15735 406 aa16.21■□□□□ 0.19
CTNS-205ENST00000467663 IFNL2Q8IZJ0 200 aa16.21■□□□□ 0.19
CTNS-205ENST00000467663 ATF5Q9Y2D1 282 aaPredicted RBP16.21■□□□□ 0.19
CTNS-205ENST00000467663 SGIP1Q9BQI5 828 aa16.2■□□□□ 0.18
CTNS-205ENST00000467663 PALLDQ8WX93 1383 aa16.19■□□□□ 0.18
CTNS-205ENST00000467663 SLC16A10Q8TF71 515 aa16.19■□□□□ 0.18
CTNS-205ENST00000467663 PIGBQ92521 554 aa16.19■□□□□ 0.18
CTNS-205ENST00000467663 SMARCC1Q92922 1105 aaPredicted RBP16.19■□□□□ 0.18
CTNS-205ENST00000467663 TOGARAM1Q9Y4F4 1720 aa16.19■□□□□ 0.18
CTNS-205ENST00000467663 PNPLA7Q6ZV29 1317 aa16.19■□□□□ 0.18
CTNS-205ENST00000467663 HMGB2P26583 209 aaKnown RBP16.18■□□□□ 0.18
CTNS-205ENST00000467663 IL13P35225 146 aa16.18■□□□□ 0.18
CTNS-205ENST00000467663 TFCP2L1Q9NZI6 479 aa16.18■□□□□ 0.18
CTNS-205ENST00000467663 MYBBP1AQ9BQG0 1328 aaKnown RBP16.18■□□□□ 0.18
CTNS-205ENST00000467663 AMOTQ4VCS5 1084 aa16.17■□□□□ 0.18
CTNS-205ENST00000467663 PLEKHO1Q53GL0 409 aaPredicted RBP16.17■□□□□ 0.18
CTNS-205ENST00000467663 QSER1Q2KHR3 1735 aa16.16■□□□□ 0.18
CTNS-205ENST00000467663 MTHFSP49914 203 aa16.16■□□□□ 0.18
CTNS-205ENST00000467663 AEBP1Q8IUX7 1158 aa16.16■□□□□ 0.18
CTNS-205ENST00000467663 KDRP35968 1356 aa16.15■□□□□ 0.18
CTNS-205ENST00000467663 ITGB4P16144 1822 aa16.15■□□□□ 0.18
CTNS-205ENST00000467663 CC2D1BQ5T0F9 858 aaKnown RBP16.15■□□□□ 0.18
CTNS-205ENST00000467663 SULT6B1Q6IMI4 303 aa16.15■□□□□ 0.18
CTNS-205ENST00000467663 TMOD3Q9NYL9 352 aa16.15■□□□□ 0.18
CTNS-205ENST00000467663 ERVV-2B6SEH9 535 aa16.14■□□□□ 0.17
CTNS-205ENST00000467663 HSP90AB1P08238 724 aaKnown RBP16.14■□□□□ 0.17
CTNS-205ENST00000467663 DCAF5Q96JK2 942 aa16.14■□□□□ 0.17
CTNS-205ENST00000467663 ARXQ96QS3 562 aa16.13■□□□□ 0.17
CTNS-205ENST00000467663 ZNF530Q6P9A1 599 aaPredicted RBP16.12■□□□□ 0.17
CTNS-205ENST00000467663 COL23A1Q86Y22 540 aaPredicted RBP16.12■□□□□ 0.17
CTNS-205ENST00000467663 SYT17Q9BSW7 474 aa16.12■□□□□ 0.17
CTNS-205ENST00000467663 FHDC1Q9C0D6 1143 aaPredicted RBP16.12■□□□□ 0.17
CTNS-205ENST00000467663 ASAP1Q9ULH1 1129 aa16.12■□□□□ 0.17
CTNS-205ENST00000467663 TUBGCP6Q96RT7 1819 aa16.11■□□□□ 0.17
CTNS-205ENST00000467663 LOC102724428A0A0B4J2F2 783 aa16.11■□□□□ 0.17
CTNS-205ENST00000467663 SIK1P57059 783 aa16.11■□□□□ 0.17
CTNS-205ENST00000467663 ATG3Q9NT62 314 aa16.11■□□□□ 0.17
CTNS-205ENST00000467663 C5P01031 1676 aa16.11■□□□□ 0.17
CTNS-205ENST00000467663 KDM6AO15550 1401 aaPredicted RBP16.11■□□□□ 0.17
CTNS-205ENST00000467663 FLAD1Q8NFF5 587 aa16.1■□□□□ 0.17
CTNS-205ENST00000467663 COL24A1Q17RW2 1714 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms