RNA–Protein interactions for RNA: ENST00000467642.5

ZC3HC1-204, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 2

Gene ZC3HC1, Length 1,934 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-204ENST00000467642 TATP17735 454 aaPredicted RBP13.4□□□□□ -0.26
ZC3HC1-204ENST00000467642 EIF4A2Q14240 407 aaKnown RBP13.4□□□□□ -0.26
ZC3HC1-204ENST00000467642 ZCRB1Q8TBF4 217 aaKnown RBP13.4□□□□□ -0.26
ZC3HC1-204ENST00000467642 EYA1Q99502 592 aa13.4□□□□□ -0.26
ZC3HC1-204ENST00000467642 MTHFSP49914 203 aa13.39□□□□□ -0.27
ZC3HC1-204ENST00000467642 NPC1L1Q9UHC9 1359 aa13.38□□□□□ -0.27
ZC3HC1-204ENST00000467642 BCL11BQ9C0K0 894 aaPredicted RBP13.38□□□□□ -0.27
ZC3HC1-204ENST00000467642 MEGF6O75095 1541 aa13.38□□□□□ -0.27
ZC3HC1-204ENST00000467642 EZH2Q15910 746 aaKnown RBP13.37□□□□□ -0.27
ZC3HC1-204ENST00000467642 ACSBG1Q96GR2 724 aa13.37□□□□□ -0.27
ZC3HC1-204ENST00000467642 TNS1Q9HBL0 1735 aaKnown RBP13.37□□□□□ -0.27
ZC3HC1-204ENST00000467642 BCL9O00512 1426 aa13.37□□□□□ -0.27
ZC3HC1-204ENST00000467642 RBM19Q9Y4C8 960 aaKnown RBP13.37□□□□□ -0.27
ZC3HC1-204ENST00000467642 KCNQ2O43526 872 aa13.36□□□□□ -0.27
ZC3HC1-204ENST00000467642 PTF1AQ7RTS3 328 aa13.36□□□□□ -0.27
ZC3HC1-204ENST00000467642 SBF2Q86WG5 1849 aa13.36□□□□□ -0.27
ZC3HC1-204ENST00000467642 KAT6BQ8WYB5 2073 aa13.36□□□□□ -0.27
ZC3HC1-204ENST00000467642 CAMKK2Q96RR4 588 aa13.35□□□□□ -0.27
ZC3HC1-204ENST00000467642 CCER2I3L3R5 266 aa13.34□□□□□ -0.27
ZC3HC1-204ENST00000467642 FKBP8Q14318 412 aa13.34□□□□□ -0.27
ZC3HC1-204ENST00000467642 SYTL4Q96C24 671 aaPredicted RBP13.34□□□□□ -0.27
ZC3HC1-204ENST00000467642 IGSF1Q8N6C5 1336 aa13.33□□□□□ -0.28
ZC3HC1-204ENST00000467642 PCDH11XQ9BZA7 1347 aa13.33□□□□□ -0.28
ZC3HC1-204ENST00000467642 PCDH11YQ9BZA8 1340 aa13.33□□□□□ -0.28
ZC3HC1-204ENST00000467642 NEFLP07196 543 aa13.33□□□□□ -0.28
ZC3HC1-204ENST00000467642 DDX10Q13206 875 aaKnown RBP13.33□□□□□ -0.28
ZC3HC1-204ENST00000467642 SPG7Q9UQ90 795 aa13.33□□□□□ -0.28
ZC3HC1-204ENST00000467642 NCAPD2Q15021 1401 aa13.33□□□□□ -0.28
ZC3HC1-204ENST00000467642 PARD3Q8TEW0 1356 aa13.33□□□□□ -0.28
ZC3HC1-204ENST00000467642 PLSCR1O15162 318 aa13.33□□□□□ -0.28
ZC3HC1-204ENST00000467642 IL13P35225 146 aa13.33□□□□□ -0.28
ZC3HC1-204ENST00000467642 DIAPH1O60610 1272 aaKnown RBP13.31□□□□□ -0.28
ZC3HC1-204ENST00000467642 PRIM1P49642 420 aaKnown RBP13.31□□□□□ -0.28
ZC3HC1-204ENST00000467642 SULT6B1Q6IMI4 303 aa13.31□□□□□ -0.28
ZC3HC1-204ENST00000467642 SRCAPQ6ZRS2 3230 aa13.31□□□□□ -0.28
ZC3HC1-204ENST00000467642 CYP27B1O15528 508 aa13.31□□□□□ -0.28
ZC3HC1-204ENST00000467642 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.31□□□□□ -0.28
ZC3HC1-204ENST00000467642 SHANK3Q9BYB0 1731 aa13.31□□□□□ -0.28
ZC3HC1-204ENST00000467642 AEBP1Q8IUX7 1158 aa13.3□□□□□ -0.28
ZC3HC1-204ENST00000467642 FANCIQ9NVI1 1328 aa13.3□□□□□ -0.28
ZC3HC1-204ENST00000467642 NHSQ6T4R5 1651 aa13.29□□□□□ -0.28
ZC3HC1-204ENST00000467642 PPP2R1AP30153 589 aa13.29□□□□□ -0.28
ZC3HC1-204ENST00000467642 PLEKHO1Q53GL0 409 aaPredicted RBP13.29□□□□□ -0.28
ZC3HC1-204ENST00000467642 NBPF14Q5TI25 921 aa13.29□□□□□ -0.28
ZC3HC1-204ENST00000467642 CFAP53Q96M91 514 aa13.29□□□□□ -0.28
ZC3HC1-204ENST00000467642 PSDA5PKW4 1024 aaPredicted RBP13.28□□□□□ -0.28
ZC3HC1-204ENST00000467642 U2SURPO15042 1029 aaKnown RBP13.28□□□□□ -0.28
ZC3HC1-204ENST00000467642 HMOX1P09601 288 aa13.28□□□□□ -0.28
ZC3HC1-204ENST00000467642 IFNL2Q8IZJ0 200 aa13.28□□□□□ -0.28
ZC3HC1-204ENST00000467642 TXNRD1Q16881 649 aa13.27□□□□□ -0.28
ZC3HC1-204ENST00000467642 AMOTQ4VCS5 1084 aa13.27□□□□□ -0.28
ZC3HC1-204ENST00000467642 PROM2Q8N271 834 aa13.27□□□□□ -0.28
ZC3HC1-204ENST00000467642 PKD1L3Q7Z443 1732 aa13.27□□□□□ -0.28
ZC3HC1-204ENST00000467642 PHKG2P15735 406 aa13.27□□□□□ -0.29
ZC3HC1-204ENST00000467642 R3HDM1Q15032 1099 aaKnown RBP13.27□□□□□ -0.29
ZC3HC1-204ENST00000467642 MPRIPQ6WCQ1 1025 aa13.27□□□□□ -0.29
ZC3HC1-204ENST00000467642 DOT1LQ8TEK3 1739 aa13.26□□□□□ -0.29
ZC3HC1-204ENST00000467642 BTAF1O14981 1849 aa13.26□□□□□ -0.29
ZC3HC1-204ENST00000467642 NKX1-1Q15270 411 aaPredicted RBP13.26□□□□□ -0.29
ZC3HC1-204ENST00000467642 KDRP35968 1356 aa13.26□□□□□ -0.29
ZC3HC1-204ENST00000467642 PLEKHG2Q9H7P9 1386 aa13.25□□□□□ -0.29
ZC3HC1-204ENST00000467642 ZNF530Q6P9A1 599 aaPredicted RBP13.25□□□□□ -0.29
ZC3HC1-204ENST00000467642 RGPD3A6NKT7 1758 aaPredicted RBP13.25□□□□□ -0.29
ZC3HC1-204ENST00000467642 RGPD4Q7Z3J3 1758 aa13.25□□□□□ -0.29
ZC3HC1-204ENST00000467642 RREB1Q92766 1687 aa13.25□□□□□ -0.29
ZC3HC1-204ENST00000467642 NUDCQ9Y266 331 aa13.25□□□□□ -0.29
ZC3HC1-204ENST00000467642 C1orf141Q5JVX7 400 aa13.24□□□□□ -0.29
ZC3HC1-204ENST00000467642 HSP90AB1P08238 724 aaKnown RBP13.23□□□□□ -0.29
ZC3HC1-204ENST00000467642 NUP188Q5SRE5 1749 aa13.23□□□□□ -0.29
ZC3HC1-204ENST00000467642 COL3A1P02461 1466 aaPredicted RBP13.23□□□□□ -0.29
ZC3HC1-204ENST00000467642 RALBP1Q15311 655 aa13.23□□□□□ -0.29
ZC3HC1-204ENST00000467642 DCAF5Q96JK2 942 aa13.22□□□□□ -0.29
ZC3HC1-204ENST00000467642 TMOD3Q9NYL9 352 aa13.22□□□□□ -0.29
ZC3HC1-204ENST00000467642 U2AF1L5P0DN76 240 aaPredicted RBP13.21□□□□□ -0.29
ZC3HC1-204ENST00000467642 U2AF1Q01081 240 aaKnown RBP eCLIP13.21□□□□□ -0.29
ZC3HC1-204ENST00000467642 SLC27A3Q5K4L6 730 aa13.21□□□□□ -0.29
ZC3HC1-204ENST00000467642 PIGBQ92521 554 aa13.21□□□□□ -0.29
ZC3HC1-204ENST00000467642 ANO8Q9HCE9 1232 aaPredicted RBP13.21□□□□□ -0.3
ZC3HC1-204ENST00000467642 LRRC4BQ9NT99 713 aa13.21□□□□□ -0.3
ZC3HC1-204ENST00000467642 STK32BQ9NY57 414 aa13.21□□□□□ -0.3
ZC3HC1-204ENST00000467642 KCNQ4P56696 695 aa13.2□□□□□ -0.3
ZC3HC1-204ENST00000467642 ERICH6BQ5W0A0 696 aa13.2□□□□□ -0.3
ZC3HC1-204ENST00000467642 TOGARAM1Q9Y4F4 1720 aa13.2□□□□□ -0.3
ZC3HC1-204ENST00000467642 ITGB4P16144 1822 aa13.2□□□□□ -0.3
ZC3HC1-204ENST00000467642 ERVV-2B6SEH9 535 aa13.19□□□□□ -0.3
ZC3HC1-204ENST00000467642 MSH5O43196 834 aa13.19□□□□□ -0.3
ZC3HC1-204ENST00000467642 CABP4P57796 275 aa13.19□□□□□ -0.3
ZC3HC1-204ENST00000467642 MTHFSDQ2M296 383 aaKnown RBP13.19□□□□□ -0.3
ZC3HC1-204ENST00000467642 AKAP4Q5JQC9 854 aa13.19□□□□□ -0.3
ZC3HC1-204ENST00000467642 SMARCC1Q92922 1105 aaPredicted RBP13.19□□□□□ -0.3
ZC3HC1-204ENST00000467642 CCNL1Q9UK58 526 aaPredicted RBP13.19□□□□□ -0.3
ZC3HC1-204ENST00000467642 SLC15A2Q16348 729 aa13.19□□□□□ -0.3
ZC3HC1-204ENST00000467642 PALLDQ8WX93 1383 aa13.18□□□□□ -0.3
ZC3HC1-204ENST00000467642 ANP32CO43423 234 aa13.17□□□□□ -0.3
ZC3HC1-204ENST00000467642 PRKAR2BP31323 418 aa13.17□□□□□ -0.3
ZC3HC1-204ENST00000467642 ASAP1Q9ULH1 1129 aa13.17□□□□□ -0.3
ZC3HC1-204ENST00000467642 FCHSD2O94868 740 aa13.17□□□□□ -0.3
ZC3HC1-204ENST00000467642 NFATC2IPQ8NCF5 419 aa13.17□□□□□ -0.3
ZC3HC1-204ENST00000467642 RSPH6AQ9H0K4 717 aa13.17□□□□□ -0.3
ZC3HC1-204ENST00000467642 LY75O60449 1722 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms