RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 ZNF526Q8TF50 670 aaPredicted RBP15.25■□□□□ 0.03
PRPF3-203ENST00000467514 ATP10DQ9P241 1426 aa15.25■□□□□ 0.03
PRPF3-203ENST00000467514 ANKRD24Q8TF21 1146 aa15.24■□□□□ 0.03
PRPF3-203ENST00000467514 AKT1S1Q96B36 256 aa15.24■□□□□ 0.03
PRPF3-203ENST00000467514 KCNQ4P56696 695 aa15.23■□□□□ 0.03
PRPF3-203ENST00000467514 MON2Q7Z3U7 1717 aa15.23■□□□□ 0.03
PRPF3-203ENST00000467514 DOT1LQ8TEK3 1739 aa15.23■□□□□ 0.03
PRPF3-203ENST00000467514 ST20-MTHFSA0A0A6YYL1 179 aa15.22■□□□□ 0.03
PRPF3-203ENST00000467514 YBX3P16989 372 aaKnown RBP eCLIP15.22■□□□□ 0.03
PRPF3-203ENST00000467514 COL24A1Q17RW2 1714 aa15.21■□□□□ 0.03
PRPF3-203ENST00000467514 MSL1Q68DK7 614 aa15.21■□□□□ 0.03
PRPF3-203ENST00000467514 LTV1Q96GA3 475 aaPredicted RBP15.21■□□□□ 0.03
PRPF3-203ENST00000467514 TESK2Q96S53 571 aa15.21■□□□□ 0.03
PRPF3-203ENST00000467514 KIF7Q2M1P5 1343 aa15.2■□□□□ 0.02
PRPF3-203ENST00000467514 HSPA6P17066 643 aa15.2■□□□□ 0.02
PRPF3-203ENST00000467514 CCNL1Q9UK58 526 aaPredicted RBP15.2■□□□□ 0.02
PRPF3-203ENST00000467514 FAM208AQ9UK61 1670 aaKnown RBP15.19■□□□□ 0.02
PRPF3-203ENST00000467514 DDX10Q13206 875 aaKnown RBP15.19■□□□□ 0.02
PRPF3-203ENST00000467514 TMC1Q8TDI8 760 aa15.19■□□□□ 0.02
PRPF3-203ENST00000467514 LY75O60449 1722 aa15.18■□□□□ 0.02
PRPF3-203ENST00000467514 PRIM1P49642 420 aaKnown RBP15.18■□□□□ 0.02
PRPF3-203ENST00000467514 HDGFL2Q7Z4V5 671 aaPredicted RBP15.18■□□□□ 0.02
PRPF3-203ENST00000467514 NME9Q86XW9 330 aa15.18■□□□□ 0.02
PRPF3-203ENST00000467514 ANKRD36BQ8N2N9 1353 aa15.16■□□□□ 0.02
PRPF3-203ENST00000467514 USP54Q70EL1 1684 aa15.16■□□□□ 0.02
PRPF3-203ENST00000467514 USP31Q70CQ4 1352 aa15.15■□□□□ 0.02
PRPF3-203ENST00000467514 WWC3Q9ULE0 1092 aa15.15■□□□□ 0.02
PRPF3-203ENST00000467514 COL23A1Q86Y22 540 aaPredicted RBP15.14■□□□□ 0.01
PRPF3-203ENST00000467514 MIER1Q8N108 512 aa15.14■□□□□ 0.01
PRPF3-203ENST00000467514 CD2APQ9Y5K6 639 aa15.13■□□□□ 0.01
PRPF3-203ENST00000467514 C5P01031 1676 aa15.12■□□□□ 0.01
PRPF3-203ENST00000467514 SBNO2Q9Y2G9 1366 aa15.12■□□□□ 0.01
PRPF3-203ENST00000467514 ZCRB1Q8TBF4 217 aaKnown RBP15.12■□□□□ 0.01
PRPF3-203ENST00000467514 HMGB2P26583 209 aaKnown RBP15.11■□□□□ 0.01
PRPF3-203ENST00000467514 AMPHP49418 695 aa15.11■□□□□ 0.01
PRPF3-203ENST00000467514 FLAD1Q8NFF5 587 aa15.11■□□□□ 0.01
PRPF3-203ENST00000467514 EDC4Q6P2E9 1401 aaKnown RBP15.1■□□□□ 0.01
PRPF3-203ENST00000467514 IP6K1Q92551 441 aa15.1■□□□□ 0.01
PRPF3-203ENST00000467514 TERF2IPQ9NYB0 399 aa15.1■□□□□ 0.01
PRPF3-203ENST00000467514 RGPD2P0DJD1 1756 aa15.09■□□□□ 0.01
PRPF3-203ENST00000467514 AK7Q96M32 723 aa15.09■□□□□ 0.01
PRPF3-203ENST00000467514 IGSF1Q8N6C5 1336 aa15.09■□□□□ 0.01
PRPF3-203ENST00000467514 ADCY9O60503 1353 aa15.09■□□□□ 0.01
PRPF3-203ENST00000467514 NSD2O96028 1365 aa15.09■□□□□ 0.01
PRPF3-203ENST00000467514 PHF14O94880 888 aa15.08■□□□□ 0
PRPF3-203ENST00000467514 APLP1P51693 650 aa15.07■□□□□ 0
PRPF3-203ENST00000467514 TMF1P82094 1093 aa15.07■□□□□ 0
PRPF3-203ENST00000467514 RAPGEF4Q8WZA2 1011 aa15.07■□□□□ 0
PRPF3-203ENST00000467514 COG3Q96JB2 828 aa15.07■□□□□ 0
PRPF3-203ENST00000467514 TAF1LQ8IZX4 1826 aa15.06■□□□□ 0
PRPF3-203ENST00000467514 SLC24A1O60721 1099 aa15.06■□□□□ 0
PRPF3-203ENST00000467514 SMG6Q86US8 1419 aaKnown RBP15.06■□□□□ 0
PRPF3-203ENST00000467514 MEGF6O75095 1541 aa15.06■□□□□ 0
PRPF3-203ENST00000467514 HOXC9P31274 260 aa15.05■□□□□ -0
PRPF3-203ENST00000467514 SLC12A5Q9H2X9 1139 aa15.05■□□□□ -0
PRPF3-203ENST00000467514 A0A1W2PP64 1363 aa15.05■□□□□ -0
PRPF3-203ENST00000467514 PALLDQ8WX93 1383 aa15.05■□□□□ -0
PRPF3-203ENST00000467514 CD163L1Q9NR16 1453 aa15.05■□□□□ -0
PRPF3-203ENST00000467514 C4BP0C0L5 1744 aa15.04■□□□□ -0
PRPF3-203ENST00000467514 NSD3Q9BZ95 1437 aa15.04■□□□□ -0
PRPF3-203ENST00000467514 MPRIPQ6WCQ1 1025 aa15.04■□□□□ -0
PRPF3-203ENST00000467514 MAP3K19Q56UN5 1328 aa15.03■□□□□ -0
PRPF3-203ENST00000467514 CAPN15O75808 1086 aa15.03■□□□□ -0
PRPF3-203ENST00000467514 TATP17735 454 aaPredicted RBP15.03■□□□□ -0
PRPF3-203ENST00000467514 USHBP1Q8N6Y0 703 aa15.03■□□□□ -0
PRPF3-203ENST00000467514 PCDH11XQ9BZA7 1347 aa15.02■□□□□ -0
PRPF3-203ENST00000467514 PCDH11YQ9BZA8 1340 aa15.02■□□□□ -0
PRPF3-203ENST00000467514 KIF3CO14782 793 aa15.02■□□□□ -0
PRPF3-203ENST00000467514 C16orf71Q8IYS4 520 aaPredicted RBP15.02■□□□□ -0
PRPF3-203ENST00000467514 CGNL1Q0VF96 1302 aa15.01□□□□□ -0.01
PRPF3-203ENST00000467514 CDCA8Q53HL2 280 aa15.01□□□□□ -0.01
PRPF3-203ENST00000467514 SMARCC1Q92922 1105 aaPredicted RBP15.01□□□□□ -0.01
PRPF3-203ENST00000467514 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15□□□□□ -0.01
PRPF3-203ENST00000467514 PUS7Q96PZ0 661 aaKnown RBP15□□□□□ -0.01
PRPF3-203ENST00000467514 RTL1A6NKG5 1358 aa14.99□□□□□ -0.01
PRPF3-203ENST00000467514 UBR3Q6ZT12 1888 aa14.99□□□□□ -0.01
PRPF3-203ENST00000467514 TOMM70O94826 608 aa14.99□□□□□ -0.01
PRPF3-203ENST00000467514 WDR90Q96KV7 1748 aa14.98□□□□□ -0.01
PRPF3-203ENST00000467514 ANP32CO43423 234 aa14.98□□□□□ -0.01
PRPF3-203ENST00000467514 FBLN1P23142 703 aa14.98□□□□□ -0.01
PRPF3-203ENST00000467514 NBPF6Q5VWK0 638 aa14.98□□□□□ -0.01
PRPF3-203ENST00000467514 NBPF4Q96M43 638 aa14.98□□□□□ -0.01
PRPF3-203ENST00000467514 BCS1LQ9Y276 419 aa14.98□□□□□ -0.01
PRPF3-203ENST00000467514 ITGB4P16144 1822 aa14.98□□□□□ -0.01
PRPF3-203ENST00000467514 PER1O15534 1290 aaPredicted RBP14.97□□□□□ -0.01
PRPF3-203ENST00000467514 RRS1Q15050 365 aaKnown RBP14.97□□□□□ -0.01
PRPF3-203ENST00000467514 SMIM5Q71RC9 77 aa14.97□□□□□ -0.01
PRPF3-203ENST00000467514 POLR3GLQ9BT43 218 aa14.97□□□□□ -0.01
PRPF3-203ENST00000467514 TOGARAM1Q9Y4F4 1720 aa14.97□□□□□ -0.01
PRPF3-203ENST00000467514 CCER2I3L3R5 266 aa14.96□□□□□ -0.01
PRPF3-203ENST00000467514 GNPATO15228 680 aa14.96□□□□□ -0.01
PRPF3-203ENST00000467514 SSFA2P28290 1259 aa14.96□□□□□ -0.01
PRPF3-203ENST00000467514 ARHGAP27Q6ZUM4 889 aa14.96□□□□□ -0.01
PRPF3-203ENST00000467514 N4BP2Q86UW6 1770 aaPredicted RBP14.96□□□□□ -0.02
PRPF3-203ENST00000467514 PRKRIP1Q9H875 184 aaPredicted RBP14.95□□□□□ -0.02
PRPF3-203ENST00000467514 CICQ96RK0 1608 aaPredicted RBP14.95□□□□□ -0.02
PRPF3-203ENST00000467514 MMP10P09238 476 aa14.94□□□□□ -0.02
PRPF3-203ENST00000467514 NMRK2Q9NPI5 230 aa14.94□□□□□ -0.02
PRPF3-203ENST00000467514 AMIGO3Q86WK7 504 aa14.93□□□□□ -0.02
PRPF3-203ENST00000467514 TNS4Q8IZW8 715 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms