RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 COL22A1Q8NFW1 1626 aaPredicted RBP15.89■□□□□ 0.13
HDLBP-231ENST00000467435 ERBB3P21860 1342 aa15.89■□□□□ 0.13
HDLBP-231ENST00000467435 KIAA0232Q92628 1395 aa15.88■□□□□ 0.13
HDLBP-231ENST00000467435 MCM10Q7L590 875 aa15.88■□□□□ 0.13
HDLBP-231ENST00000467435 MBIPQ9NS73 344 aa15.88■□□□□ 0.13
HDLBP-231ENST00000467435 AXIN2Q9Y2T1 843 aa15.88■□□□□ 0.13
HDLBP-231ENST00000467435 PHLPP1O60346 1717 aa15.88■□□□□ 0.13
HDLBP-231ENST00000467435 RTF1Q92541 710 aaKnown RBP15.87■□□□□ 0.13
HDLBP-231ENST00000467435 BCL2L13Q9BXK5 485 aa15.87■□□□□ 0.13
HDLBP-231ENST00000467435 PARP4Q9UKK3 1724 aaKnown RBP15.87■□□□□ 0.13
HDLBP-231ENST00000467435 PKD1L3Q7Z443 1732 aa15.86■□□□□ 0.13
HDLBP-231ENST00000467435 AEBP2Q6ZN18 517 aaPredicted RBP15.86■□□□□ 0.13
HDLBP-231ENST00000467435 CCDC136Q96JN2 1154 aa15.86■□□□□ 0.13
HDLBP-231ENST00000467435 KDM3BQ7LBC6 1761 aa15.85■□□□□ 0.13
HDLBP-231ENST00000467435 GNAT3A8MTJ3 354 aa15.85■□□□□ 0.13
HDLBP-231ENST00000467435 HTATSF1O43719 755 aaKnown RBP15.85■□□□□ 0.13
HDLBP-231ENST00000467435 SMC4Q9NTJ3 1288 aa15.85■□□□□ 0.13
HDLBP-231ENST00000467435 ADAMTS7Q9UKP4 1686 aa15.84■□□□□ 0.13
HDLBP-231ENST00000467435 CHRNA2Q15822 529 aa15.84■□□□□ 0.13
HDLBP-231ENST00000467435 FRAT1Q92837 279 aaPredicted RBP15.84■□□□□ 0.13
HDLBP-231ENST00000467435 COL16A1Q07092 1604 aaPredicted RBP15.83■□□□□ 0.13
HDLBP-231ENST00000467435 SIPA1L3O60292 1781 aaPredicted RBP15.83■□□□□ 0.12
HDLBP-231ENST00000467435 HAP1P54257 671 aaPredicted RBP15.83■□□□□ 0.12
HDLBP-231ENST00000467435 PDE3AQ14432 1141 aa15.83■□□□□ 0.12
HDLBP-231ENST00000467435 ZNF428Q96B54 188 aa15.83■□□□□ 0.12
HDLBP-231ENST00000467435 ALDH1L2Q3SY69 923 aa15.82■□□□□ 0.12
HDLBP-231ENST00000467435 SSH1Q8WYL5 1049 aa15.82■□□□□ 0.12
HDLBP-231ENST00000467435 PRDM11Q9NQV5 511 aa15.82■□□□□ 0.12
HDLBP-231ENST00000467435 COL5A2P05997 1499 aaPredicted RBP15.82■□□□□ 0.12
HDLBP-231ENST00000467435 COL14A1Q05707 1796 aaKnown RBP15.82■□□□□ 0.12
HDLBP-231ENST00000467435 SCN11AQ9UI33 1791 aa15.82■□□□□ 0.12
HDLBP-231ENST00000467435 CHL1O00533 1208 aa15.81■□□□□ 0.12
HDLBP-231ENST00000467435 MEGF6O75095 1541 aa15.81■□□□□ 0.12
HDLBP-231ENST00000467435 CSB-PGBD3P0DP91 1061 aa15.81■□□□□ 0.12
HDLBP-231ENST00000467435 TWISTNBQ3B726 338 aaPredicted RBP15.81■□□□□ 0.12
HDLBP-231ENST00000467435 PLEKHO1Q53GL0 409 aaPredicted RBP15.81■□□□□ 0.12
HDLBP-231ENST00000467435 KIF16BQ96L93 1317 aa15.81■□□□□ 0.12
HDLBP-231ENST00000467435 OVOS2A0A0G2JMS6 1433 aa15.8■□□□□ 0.12
HDLBP-231ENST00000467435 VAMP4O75379 141 aa15.8■□□□□ 0.12
HDLBP-231ENST00000467435 AMOTQ4VCS5 1084 aa15.8■□□□□ 0.12
HDLBP-231ENST00000467435 ZKSCAN2Q63HK3 967 aa15.8■□□□□ 0.12
HDLBP-231ENST00000467435 ZNF530Q6P9A1 599 aaPredicted RBP15.8■□□□□ 0.12
HDLBP-231ENST00000467435 TSPYL6Q8N831 410 aa15.8■□□□□ 0.12
HDLBP-231ENST00000467435 NLRP2Q9NX02 1062 aa15.8■□□□□ 0.12
HDLBP-231ENST00000467435 CEMIPQ8WUJ3 1361 aa15.79■□□□□ 0.12
HDLBP-231ENST00000467435 PLEKHG2Q9H7P9 1386 aa15.79■□□□□ 0.12
HDLBP-231ENST00000467435 C8orf58Q8NAV2 365 aa15.79■□□□□ 0.12
HDLBP-231ENST00000467435 PANK1Q8TE04 598 aa15.79■□□□□ 0.12
HDLBP-231ENST00000467435 TSPYL4Q9UJ04 414 aa15.79■□□□□ 0.12
HDLBP-231ENST00000467435 AKAP4Q5JQC9 854 aa15.78■□□□□ 0.12
HDLBP-231ENST00000467435 TNNQ9UQP3 1299 aa15.78■□□□□ 0.12
HDLBP-231ENST00000467435 PLCH1Q4KWH8 1693 aa15.78■□□□□ 0.12
HDLBP-231ENST00000467435 ELL2O00472 640 aaPredicted RBP15.77■□□□□ 0.12
HDLBP-231ENST00000467435 MS4A1P11836 297 aa15.77■□□□□ 0.12
HDLBP-231ENST00000467435 C1orf141Q5JVX7 400 aa15.77■□□□□ 0.12
HDLBP-231ENST00000467435 IL17REQ8NFR9 667 aa15.77■□□□□ 0.12
HDLBP-231ENST00000467435 RAPGEF4Q8WZA2 1011 aa15.77■□□□□ 0.12
HDLBP-231ENST00000467435 WNK3Q9BYP7 1800 aa15.77■□□□□ 0.11
HDLBP-231ENST00000467435 SHANK3Q9BYB0 1731 aa15.77■□□□□ 0.11
HDLBP-231ENST00000467435 WDR17Q8IZU2 1322 aa15.76■□□□□ 0.11
HDLBP-231ENST00000467435 RLBP1P12271 317 aa15.76■□□□□ 0.11
HDLBP-231ENST00000467435 TATP17735 454 aaPredicted RBP15.76■□□□□ 0.11
HDLBP-231ENST00000467435 FTSJ3Q8IY81 847 aaKnown RBP15.76■□□□□ 0.11
HDLBP-231ENST00000467435 COG6Q9Y2V7 657 aa15.76■□□□□ 0.11
HDLBP-231ENST00000467435 BRPF1P55201 1214 aaPredicted RBP15.75■□□□□ 0.11
HDLBP-231ENST00000467435 KRT24Q2M2I5 525 aa15.75■□□□□ 0.11
HDLBP-231ENST00000467435 ATF7IPQ6VMQ6 1270 aa15.75■□□□□ 0.11
HDLBP-231ENST00000467435 DZIP1LQ8IYY4 767 aaKnown RBP15.75■□□□□ 0.11
HDLBP-231ENST00000467435 MRPL50Q8N5N7 158 aaKnown RBP15.75■□□□□ 0.11
HDLBP-231ENST00000467435 BABAM1Q9NWV8 329 aa15.75■□□□□ 0.11
HDLBP-231ENST00000467435 MIS18AQ9NYP9 233 aa15.75■□□□□ 0.11
HDLBP-231ENST00000467435 NOB1Q9ULX3 412 aaKnown RBP15.75■□□□□ 0.11
HDLBP-231ENST00000467435 IPO8O15397 1037 aaKnown RBP15.74■□□□□ 0.11
HDLBP-231ENST00000467435 TRIM27P14373 513 aa15.74■□□□□ 0.11
HDLBP-231ENST00000467435 CLUAP1Q96AJ1 413 aa15.74■□□□□ 0.11
HDLBP-231ENST00000467435 CACNA1FO60840 1977 aa15.74■□□□□ 0.11
HDLBP-231ENST00000467435 NRAPQ86VF7 1730 aa15.74■□□□□ 0.11
HDLBP-231ENST00000467435 TAF7Q15545 349 aaPredicted RBP15.73■□□□□ 0.11
HDLBP-231ENST00000467435 TOM1O60784 492 aa15.72■□□□□ 0.11
HDLBP-231ENST00000467435 MVPQ14764 893 aaKnown RBP15.72■□□□□ 0.11
HDLBP-231ENST00000467435 TOM1L2Q6ZVM7 507 aa15.72■□□□□ 0.11
HDLBP-231ENST00000467435 LGR6Q9HBX8 967 aa15.72■□□□□ 0.11
HDLBP-231ENST00000467435 SPG7Q9UQ90 795 aa15.72■□□□□ 0.11
HDLBP-231ENST00000467435 N4BP2Q86UW6 1770 aaPredicted RBP15.72■□□□□ 0.11
HDLBP-231ENST00000467435 MRC1P22897 1456 aa15.71■□□□□ 0.11
HDLBP-231ENST00000467435 KDM6AO15550 1401 aaPredicted RBP15.71■□□□□ 0.11
HDLBP-231ENST00000467435 TCERG1O14776 1098 aaKnown RBP15.71■□□□□ 0.11
HDLBP-231ENST00000467435 RNMTO43148 476 aaKnown RBP15.71■□□□□ 0.11
HDLBP-231ENST00000467435 MPRIPQ6WCQ1 1025 aa15.71■□□□□ 0.11
HDLBP-231ENST00000467435 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.71■□□□□ 0.111e-25■■□□□ 12.8
HDLBP-231ENST00000467435 TEFQ10587 303 aa15.7■□□□□ 0.1
HDLBP-231ENST00000467435 AAMPQ13685 434 aa15.7■□□□□ 0.1
HDLBP-231ENST00000467435 ARHGAP45Q92619 1136 aa15.7■□□□□ 0.1
HDLBP-231ENST00000467435 SOS1Q07889 1333 aaPredicted RBP15.69■□□□□ 0.1
HDLBP-231ENST00000467435 ITPRIPQ8IWB1 547 aa15.69■□□□□ 0.1
HDLBP-231ENST00000467435 STRN4Q9NRL3 753 aa15.69■□□□□ 0.1
HDLBP-231ENST00000467435 KDM2BQ8NHM5 1336 aa15.68■□□□□ 0.1
HDLBP-231ENST00000467435 NWD2Q9ULI1 1742 aa15.68■□□□□ 0.1
HDLBP-231ENST00000467435 C5P01031 1676 aa15.68■□□□□ 0.1
HDLBP-231ENST00000467435 PHKG2P15735 406 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms