RNA–Protein interactions for RNA: ENST00000467366.1

PTPRE-206, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-206ENST00000467366 KIAA1551Q9HCM1 1747 aa9.46□□□□□ -0.89
PTPRE-206ENST00000467366 FAM161AQ3B820 660 aa9.46□□□□□ -0.9
PTPRE-206ENST00000467366 C16orf71Q8IYS4 520 aaPredicted RBP9.46□□□□□ -0.9
PTPRE-206ENST00000467366 PKD1L3Q7Z443 1732 aa9.45□□□□□ -0.9
PTPRE-206ENST00000467366 PPARGC1BQ86YN6 1023 aaKnown RBP9.45□□□□□ -0.9
PTPRE-206ENST00000467366 MPHOSPH9Q99550 1183 aa9.45□□□□□ -0.9
PTPRE-206ENST00000467366 NSD2O96028 1365 aa9.45□□□□□ -0.9
PTPRE-206ENST00000467366 N4BP2Q86UW6 1770 aaPredicted RBP9.45□□□□□ -0.9
PTPRE-206ENST00000467366 SOX12O15370 315 aa9.44□□□□□ -0.9
PTPRE-206ENST00000467366 IL2RBP14784 551 aa9.44□□□□□ -0.9
PTPRE-206ENST00000467366 CCNL1Q9UK58 526 aaPredicted RBP9.44□□□□□ -0.9
PTPRE-206ENST00000467366 NFAT5O94916 1531 aa9.44□□□□□ -0.9
PTPRE-206ENST00000467366 KCPQ6ZWJ8 1503 aa9.44□□□□□ -0.9
PTPRE-206ENST00000467366 TAF1LQ8IZX4 1826 aa9.43□□□□□ -0.9
PTPRE-206ENST00000467366 TOGARAM1Q9Y4F4 1720 aa9.43□□□□□ -0.9
PTPRE-206ENST00000467366 TNRC6CQ9HCJ0 1690 aaKnown RBP9.43□□□□□ -0.9
PTPRE-206ENST00000467366 PRIM1P49642 420 aaKnown RBP9.43□□□□□ -0.9
PTPRE-206ENST00000467366 SYTL4Q96C24 671 aaPredicted RBP9.43□□□□□ -0.9
PTPRE-206ENST00000467366 KIAA1210Q9ULL0 1709 aa9.42□□□□□ -0.9
PTPRE-206ENST00000467366 ANKRD36BQ8N2N9 1353 aa9.42□□□□□ -0.9
PTPRE-206ENST00000467366 NLRP2Q9NX02 1062 aa9.42□□□□□ -0.9
PTPRE-206ENST00000467366 C10orf71Q711Q0 1435 aa9.41□□□□□ -0.9
PTPRE-206ENST00000467366 ERBB3P21860 1342 aa9.41□□□□□ -0.9
PTPRE-206ENST00000467366 KIF13BQ9NQT8 1826 aa9.41□□□□□ -0.9
PTPRE-206ENST00000467366 KCNH5Q8NCM2 988 aa9.41□□□□□ -0.9
PTPRE-206ENST00000467366 DDX54Q8TDD1 881 aaKnown RBP9.41□□□□□ -0.9
PTPRE-206ENST00000467366 RRAGCQ9HB90 399 aa9.41□□□□□ -0.9
PTPRE-206ENST00000467366 CABP2Q9NPB3 220 aa9.41□□□□□ -0.9
PTPRE-206ENST00000467366 KDM2AQ9Y2K7 1162 aa9.41□□□□□ -0.9
PTPRE-206ENST00000467366 PXDNLA1KZ92 1463 aa9.4□□□□□ -0.9
PTPRE-206ENST00000467366 LTN1O94822 1766 aa9.4□□□□□ -0.9
PTPRE-206ENST00000467366 SRPK2P78362 688 aaKnown RBP9.4□□□□□ -0.9
PTPRE-206ENST00000467366 ARHGAP27Q6ZUM4 889 aa9.4□□□□□ -0.9
PTPRE-206ENST00000467366 SMIM5Q71RC9 77 aa9.4□□□□□ -0.9
PTPRE-206ENST00000467366 AMIGO3Q86WK7 504 aa9.4□□□□□ -0.9
PTPRE-206ENST00000467366 BCS1LQ9Y276 419 aa9.4□□□□□ -0.9
PTPRE-206ENST00000467366 UBR3Q6ZT12 1888 aa9.4□□□□□ -0.91
PTPRE-206ENST00000467366 C4BP0C0L5 1744 aa9.39□□□□□ -0.91
PTPRE-206ENST00000467366 SMC1BQ8NDV3 1235 aa9.39□□□□□ -0.91
PTPRE-206ENST00000467366 CABP1Q9NZU7 370 aa9.39□□□□□ -0.91
PTPRE-206ENST00000467366 BRCA1P38398 1863 aaKnown RBP9.38□□□□□ -0.91
PTPRE-206ENST00000467366 PLEKHG2Q9H7P9 1386 aa9.38□□□□□ -0.91
PTPRE-206ENST00000467366 FOXN1O15353 648 aa9.38□□□□□ -0.91
PTPRE-206ENST00000467366 C9orf131Q5VYM1 1079 aa9.38□□□□□ -0.91
PTPRE-206ENST00000467366 FLAD1Q8NFF5 587 aa9.38□□□□□ -0.91
PTPRE-206ENST00000467366 DCAF11Q8TEB1 546 aa9.38□□□□□ -0.91
PTPRE-206ENST00000467366 USP47Q96K76 1375 aa9.37□□□□□ -0.91
PTPRE-206ENST00000467366 TTC21BQ7Z4L5 1316 aa9.37□□□□□ -0.91
PTPRE-206ENST00000467366 KDM2BQ8NHM5 1336 aa9.37□□□□□ -0.91
PTPRE-206ENST00000467366 ARFGEF1Q9Y6D6 1849 aa9.37□□□□□ -0.91
PTPRE-206ENST00000467366 A0A0G2JLW4 131 aa9.36□□□□□ -0.91
PTPRE-206ENST00000467366 MLLT1Q03111 559 aaPredicted RBP9.36□□□□□ -0.91
PTPRE-206ENST00000467366 AMER1Q5JTC6 1135 aaPredicted RBP9.36□□□□□ -0.91
PTPRE-206ENST00000467366 ANKRD24Q8TF21 1146 aa9.36□□□□□ -0.91
PTPRE-206ENST00000467366 ABHD8Q96I13 439 aa9.36□□□□□ -0.91
PTPRE-206ENST00000467366 PRDM10Q9NQV6 1147 aa9.36□□□□□ -0.91
PTPRE-206ENST00000467366 PHF14O94880 888 aa9.35□□□□□ -0.91
PTPRE-206ENST00000467366 SBF1O95248 1867 aa9.35□□□□□ -0.91
PTPRE-206ENST00000467366 FCHSD2O94868 740 aa9.34□□□□□ -0.91
PTPRE-206ENST00000467366 FAM208AQ9UK61 1670 aaKnown RBP9.34□□□□□ -0.91
PTPRE-206ENST00000467366 RGPD2P0DJD1 1756 aa9.33□□□□□ -0.92
PTPRE-206ENST00000467366 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.33□□□□□ -0.92
PTPRE-206ENST00000467366 RGS19P49795 217 aa9.33□□□□□ -0.92
PTPRE-206ENST00000467366 TGFB2P61812 414 aa9.33□□□□□ -0.92
PTPRE-206ENST00000467366 AK7Q96M32 723 aa9.33□□□□□ -0.92
PTPRE-206ENST00000467366 RNF181Q9P0P0 153 aa9.33□□□□□ -0.92
PTPRE-206ENST00000467366 MKRN1Q9UHC7 482 aaKnown RBP9.33□□□□□ -0.92
PTPRE-206ENST00000467366 TTC21AQ8NDW8 1320 aa9.32□□□□□ -0.92
PTPRE-206ENST00000467366 DPEP1P16444 411 aa9.32□□□□□ -0.92
PTPRE-206ENST00000467366 RTN4Q9NQC3 1192 aaKnown RBP9.32□□□□□ -0.92
PTPRE-206ENST00000467366 PALLDQ8WX93 1383 aa9.32□□□□□ -0.92
PTPRE-206ENST00000467366 TNRC18O15417 2968 aaPredicted RBP9.32□□□□□ -0.92
PTPRE-206ENST00000467366 MMP10P09238 476 aa9.31□□□□□ -0.92
PTPRE-206ENST00000467366 CTCFP49711 727 aaPredicted RBP9.31□□□□□ -0.92
PTPRE-206ENST00000467366 LBX1P52954 281 aa9.31□□□□□ -0.92
PTPRE-206ENST00000467366 VIRMAQ69YN4 1812 aaKnown RBP9.31□□□□□ -0.92
PTPRE-206ENST00000467366 MON2Q7Z3U7 1717 aa9.31□□□□□ -0.92
PTPRE-206ENST00000467366 MEGF6O75095 1541 aa9.31□□□□□ -0.92
PTPRE-206ENST00000467366 CENPJQ9HC77 1338 aaPredicted RBP9.31□□□□□ -0.92
PTPRE-206ENST00000467366 CENPBP07199 599 aaPredicted RBP9.3□□□□□ -0.92
PTPRE-206ENST00000467366 KCNA3P22001 575 aa9.3□□□□□ -0.92
PTPRE-206ENST00000467366 SSFA2P28290 1259 aa9.3□□□□□ -0.92
PTPRE-206ENST00000467366 ZCRB1Q8TBF4 217 aaKnown RBP9.3□□□□□ -0.92
PTPRE-206ENST00000467366 ZNF692Q9BU19 519 aaPredicted RBP9.3□□□□□ -0.92
PTPRE-206ENST00000467366 MAP2P11137 1827 aaKnown RBP9.3□□□□□ -0.92
PTPRE-206ENST00000467366 C4AP0C0L4 1744 aa9.3□□□□□ -0.92
PTPRE-206ENST00000467366 NSD3Q9BZ95 1437 aa9.3□□□□□ -0.92
PTPRE-206ENST00000467366 ITGB4P16144 1822 aa9.29□□□□□ -0.92
PTPRE-206ENST00000467366 TIAM2Q8IVF5 1701 aa9.29□□□□□ -0.92
PTPRE-206ENST00000467366 VEGFAP15692 232 aaPredicted RBP9.29□□□□□ -0.92
PTPRE-206ENST00000467366 NBPF1Q3BBV0 1214 aa9.29□□□□□ -0.92
PTPRE-206ENST00000467366 STAC3Q96MF2 364 aa9.29□□□□□ -0.92
PTPRE-206ENST00000467366 CREBZFQ9NS37 354 aa9.29□□□□□ -0.92
PTPRE-206ENST00000467366 USP31Q70CQ4 1352 aa9.28□□□□□ -0.92
PTPRE-206ENST00000467366 CCDC85CA6NKD9 419 aa9.28□□□□□ -0.92
PTPRE-206ENST00000467366 AIDAQ96BJ3 306 aa9.28□□□□□ -0.92
PTPRE-206ENST00000467366 LTV1Q96GA3 475 aaPredicted RBP9.28□□□□□ -0.92
PTPRE-206ENST00000467366 DCAF5Q96JK2 942 aa9.28□□□□□ -0.92
PTPRE-206ENST00000467366 CNTNAP1P78357 1384 aa9.27□□□□□ -0.93
PTPRE-206ENST00000467366 KTN1Q86UP2 1357 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms