RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 LRRC37A3O60309 1634 aa6.36□□□□□ -1.39
CPS1-205ENST00000467353 PAPPAQ13219 1627 aa6.36□□□□□ -1.39
CPS1-205ENST00000467353 SBF2Q86WG5 1849 aa6.35□□□□□ -1.39
CPS1-205ENST00000467353 NLRP6P59044 892 aa6.35□□□□□ -1.39
CPS1-205ENST00000467353 BRD4O60885 1362 aaPredicted RBP6.34□□□□□ -1.39
CPS1-205ENST00000467353 PCNTO95613 3336 aa6.34□□□□□ -1.39
CPS1-205ENST00000467353 IGSF1Q8N6C5 1336 aa6.34□□□□□ -1.39
CPS1-205ENST00000467353 RGL2O15211 777 aa6.34□□□□□ -1.39
CPS1-205ENST00000467353 CSB-PGBD3P0DP91 1061 aa6.34□□□□□ -1.39
CPS1-205ENST00000467353 FSTL1Q12841 308 aa6.34□□□□□ -1.39
CPS1-205ENST00000467353 ARHGEF25Q86VW2 580 aa6.34□□□□□ -1.39
CPS1-205ENST00000467353 MIER1Q8N108 512 aa6.34□□□□□ -1.39
CPS1-205ENST00000467353 TSHZ2Q9NRE2 1034 aa6.34□□□□□ -1.39
CPS1-205ENST00000467353 CIZ1Q9ULV3 898 aaPredicted RBP6.34□□□□□ -1.39
CPS1-205ENST00000467353 PPARGC1BQ86YN6 1023 aaKnown RBP6.33□□□□□ -1.4
CPS1-205ENST00000467353 FAM161AQ3B820 660 aa6.32□□□□□ -1.4
CPS1-205ENST00000467353 C16orf71Q8IYS4 520 aaPredicted RBP6.32□□□□□ -1.4
CPS1-205ENST00000467353 MPHOSPH9Q99550 1183 aa6.32□□□□□ -1.4
CPS1-205ENST00000467353 COL24A1Q17RW2 1714 aa6.31□□□□□ -1.4
CPS1-205ENST00000467353 SOX12O15370 315 aa6.31□□□□□ -1.4
CPS1-205ENST00000467353 PRIM1P49642 420 aaKnown RBP6.31□□□□□ -1.4
CPS1-205ENST00000467353 SMIM5Q71RC9 77 aa6.31□□□□□ -1.4
CPS1-205ENST00000467353 ZNF692Q9BU19 519 aaPredicted RBP6.31□□□□□ -1.4
CPS1-205ENST00000467353 CCNL1Q9UK58 526 aaPredicted RBP6.31□□□□□ -1.4
CPS1-205ENST00000467353 TNS2Q63HR2 1409 aa6.31□□□□□ -1.4
CPS1-205ENST00000467353 ADGRB1O14514 1584 aa6.31□□□□□ -1.4
CPS1-205ENST00000467353 IL2RBP14784 551 aa6.3□□□□□ -1.4
CPS1-205ENST00000467353 ARHGAP27Q6ZUM4 889 aa6.3□□□□□ -1.4
CPS1-205ENST00000467353 DDX54Q8TDD1 881 aaKnown RBP6.3□□□□□ -1.4
CPS1-205ENST00000467353 SYTL4Q96C24 671 aaPredicted RBP6.3□□□□□ -1.4
CPS1-205ENST00000467353 RRAGCQ9HB90 399 aa6.3□□□□□ -1.4
CPS1-205ENST00000467353 NLRP2Q9NX02 1062 aa6.3□□□□□ -1.4
CPS1-205ENST00000467353 PPIP5K1Q6PFW1 1433 aa6.3□□□□□ -1.4
CPS1-205ENST00000467353 CCDC7Q96M83 1385 aa6.3□□□□□ -1.4
CPS1-205ENST00000467353 TOPAZ1Q8N9V7 1692 aa6.3□□□□□ -1.4
CPS1-205ENST00000467353 CPSF1Q10570 1443 aaKnown RBP6.29□□□□□ -1.4
CPS1-205ENST00000467353 C9orf131Q5VYM1 1079 aa6.29□□□□□ -1.4
CPS1-205ENST00000467353 AMIGO3Q86WK7 504 aa6.29□□□□□ -1.4
CPS1-205ENST00000467353 CABP1Q9NZU7 370 aa6.29□□□□□ -1.4
CPS1-205ENST00000467353 ERBB3P21860 1342 aa6.28□□□□□ -1.4
CPS1-205ENST00000467353 WDR90Q96KV7 1748 aa6.28□□□□□ -1.4
CPS1-205ENST00000467353 A0A0G2JLW4 131 aa6.28□□□□□ -1.4
CPS1-205ENST00000467353 TULP1O00294 542 aaPredicted RBP6.28□□□□□ -1.4
CPS1-205ENST00000467353 FOXN1O15353 648 aa6.28□□□□□ -1.4
CPS1-205ENST00000467353 KCNH5Q8NCM2 988 aa6.28□□□□□ -1.4
CPS1-205ENST00000467353 SMC1BQ8NDV3 1235 aa6.28□□□□□ -1.4
CPS1-205ENST00000467353 CABP2Q9NPB3 220 aa6.28□□□□□ -1.4
CPS1-205ENST00000467353 SPINK5Q9NQ38 1064 aaPredicted RBP6.28□□□□□ -1.4
CPS1-205ENST00000467353 BCS1LQ9Y276 419 aa6.28□□□□□ -1.4
CPS1-205ENST00000467353 NHSQ6T4R5 1651 aa6.28□□□□□ -1.4
CPS1-205ENST00000467353 COL18A1P39060 1754 aa6.27□□□□□ -1.41
CPS1-205ENST00000467353 SLIT3O75094 1523 aa6.27□□□□□ -1.41
CPS1-205ENST00000467353 SPDYE2BA6NHP3 402 aa6.27□□□□□ -1.41
CPS1-205ENST00000467353 SPDYE6P0CI01 402 aa6.27□□□□□ -1.41
CPS1-205ENST00000467353 SRPK2P78362 688 aaKnown RBP6.27□□□□□ -1.41
CPS1-205ENST00000467353 SPDYE2Q495Y8 402 aa6.27□□□□□ -1.41
CPS1-205ENST00000467353 HS6ST3Q8IZP7 471 aa6.27□□□□□ -1.41
CPS1-205ENST00000467353 FLAD1Q8NFF5 587 aa6.27□□□□□ -1.41
CPS1-205ENST00000467353 PRDM10Q9NQV6 1147 aa6.27□□□□□ -1.41
CPS1-205ENST00000467353 GTF3C3Q9Y5Q9 886 aa6.27□□□□□ -1.41
CPS1-205ENST00000467353 NSD2O96028 1365 aa6.27□□□□□ -1.41
CPS1-205ENST00000467353 ABCC6O95255 1503 aa6.26□□□□□ -1.41
CPS1-205ENST00000467353 ARHGEF28Q8N1W1 1705 aaKnown RBP6.26□□□□□ -1.41
CPS1-205ENST00000467353 MLLT1Q03111 559 aaPredicted RBP6.26□□□□□ -1.41
CPS1-205ENST00000467353 DCAF11Q8TEB1 546 aa6.26□□□□□ -1.41
CPS1-205ENST00000467353 ABHD8Q96I13 439 aa6.26□□□□□ -1.41
CPS1-205ENST00000467353 ANKRD36BQ8N2N9 1353 aa6.26□□□□□ -1.41
CPS1-205ENST00000467353 KDM2BQ8NHM5 1336 aa6.25□□□□□ -1.41
CPS1-205ENST00000467353 RGS19P49795 217 aa6.25□□□□□ -1.41
CPS1-205ENST00000467353 ANKRD24Q8TF21 1146 aa6.25□□□□□ -1.41
CPS1-205ENST00000467353 TIMELESSQ9UNS1 1208 aa6.25□□□□□ -1.41
CPS1-205ENST00000467353 BTAF1O14981 1849 aa6.25□□□□□ -1.41
CPS1-205ENST00000467353 KCPQ6ZWJ8 1503 aa6.25□□□□□ -1.41
CPS1-205ENST00000467353 TTC21BQ7Z4L5 1316 aa6.25□□□□□ -1.41
CPS1-205ENST00000467353 AKAP12Q02952 1782 aa6.24□□□□□ -1.41
CPS1-205ENST00000467353 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.24□□□□□ -1.41
CPS1-205ENST00000467353 FCHSD2O94868 740 aa6.24□□□□□ -1.41
CPS1-205ENST00000467353 PHF14O94880 888 aa6.24□□□□□ -1.41
CPS1-205ENST00000467353 DPEP1P16444 411 aa6.24□□□□□ -1.41
CPS1-205ENST00000467353 TGFB2P61812 414 aa6.24□□□□□ -1.41
CPS1-205ENST00000467353 GSE1Q14687 1217 aa6.24□□□□□ -1.41
CPS1-205ENST00000467353 RYDENQ9NUL5 291 aaKnown RBP6.24□□□□□ -1.41
CPS1-205ENST00000467353 MKRN1Q9UHC7 482 aaKnown RBP6.24□□□□□ -1.41
CPS1-205ENST00000467353 QSER1Q2KHR3 1735 aa6.24□□□□□ -1.41
CPS1-205ENST00000467353 TRPM1Q7Z4N2 1603 aa6.24□□□□□ -1.41
CPS1-205ENST00000467353 PXDNLA1KZ92 1463 aa6.23□□□□□ -1.41
CPS1-205ENST00000467353 USP47Q96K76 1375 aa6.23□□□□□ -1.41
CPS1-205ENST00000467353 MMP10P09238 476 aa6.23□□□□□ -1.41
CPS1-205ENST00000467353 KCNA3P22001 575 aa6.23□□□□□ -1.41
CPS1-205ENST00000467353 CTCFP49711 727 aaPredicted RBP6.23□□□□□ -1.41
CPS1-205ENST00000467353 LBX1P52954 281 aa6.23□□□□□ -1.41
CPS1-205ENST00000467353 RNF181Q9P0P0 153 aa6.23□□□□□ -1.41
CPS1-205ENST00000467353 CICQ96RK0 1608 aaPredicted RBP6.23□□□□□ -1.41
CPS1-205ENST00000467353 C10orf71Q711Q0 1435 aa6.23□□□□□ -1.41
CPS1-205ENST00000467353 CCDC85CA6NKD9 419 aa6.22□□□□□ -1.41
CPS1-205ENST00000467353 VEGFAP15692 232 aaPredicted RBP6.22□□□□□ -1.41
CPS1-205ENST00000467353 AK7Q96M32 723 aa6.22□□□□□ -1.41
CPS1-205ENST00000467353 TUBGCP6Q96RT7 1819 aa6.22□□□□□ -1.41
CPS1-205ENST00000467353 WNK3Q9BYP7 1800 aa6.22□□□□□ -1.41
CPS1-205ENST00000467353 PLEKHG2Q9H7P9 1386 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms