RNA–Protein interactions for RNA: ENST00000467215.1

FAM53A-204, Transcript of family with sequence similarity 53 member A, humanhuman

TSL 3

Gene FAM53A, Length 811 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-204ENST00000467215 SYTL4Q96C24 671 aaPredicted RBP27.22■■□□□ 1.95
FAM53A-204ENST00000467215 TAF1LQ8IZX4 1826 aa27.22■■□□□ 1.95
FAM53A-204ENST00000467215 HOXC9P31274 260 aa27.2■■□□□ 1.94
FAM53A-204ENST00000467215 TOGARAM1Q9Y4F4 1720 aa27.19■■□□□ 1.94
FAM53A-204ENST00000467215 FBLN1P23142 703 aa27.19■■□□□ 1.94
FAM53A-204ENST00000467215 RTL1A6NKG5 1358 aa27.19■■□□□ 1.94
FAM53A-204ENST00000467215 SLC16A10Q8TF71 515 aa27.18■■□□□ 1.94
FAM53A-204ENST00000467215 COG3Q96JB2 828 aa27.18■■□□□ 1.94
FAM53A-204ENST00000467215 PUS7Q96PZ0 661 aaKnown RBP27.18■■□□□ 1.94
FAM53A-204ENST00000467215 TESK2Q96S53 571 aa27.18■■□□□ 1.94
FAM53A-204ENST00000467215 PRIM1P49642 420 aaKnown RBP27.17■■□□□ 1.94
FAM53A-204ENST00000467215 POLD1P28340 1107 aa27.16■■□□□ 1.94
FAM53A-204ENST00000467215 GPR162Q16538 588 aa27.16■■□□□ 1.94
FAM53A-204ENST00000467215 TFCP2L1Q9NZI6 479 aa27.16■■□□□ 1.94
FAM53A-204ENST00000467215 GOLGB1Q14789 3259 aaKnown RBP27.15■■□□□ 1.94
FAM53A-204ENST00000467215 AMPHP49418 695 aa27.15■■□□□ 1.94
FAM53A-204ENST00000467215 ITGB4P16144 1822 aa27.15■■□□□ 1.94
FAM53A-204ENST00000467215 PELP1Q8IZL8 1130 aaKnown RBP27.14■■□□□ 1.94
FAM53A-204ENST00000467215 NLGN2Q8NFZ4 835 aa27.14■■□□□ 1.94
FAM53A-204ENST00000467215 SENP3-EIF4A1A0A087X0R7 540 aa27.13■■□□□ 1.93
FAM53A-204ENST00000467215 PKD1L3Q7Z443 1732 aa27.13■■□□□ 1.93
FAM53A-204ENST00000467215 ST20-MTHFSA0A0A6YYL1 179 aa27.12■■□□□ 1.93
FAM53A-204ENST00000467215 ZCRB1Q8TBF4 217 aaKnown RBP27.12■■□□□ 1.93
FAM53A-204ENST00000467215 USHBP1Q8N6Y0 703 aa27.11■■□□□ 1.93
FAM53A-204ENST00000467215 CCNL1Q9UK58 526 aaPredicted RBP27.11■■□□□ 1.93
FAM53A-204ENST00000467215 SMG6Q86US8 1419 aaKnown RBP27.1■■□□□ 1.93
FAM53A-204ENST00000467215 C1QTNF8P60827 252 aa27.1■■□□□ 1.93
FAM53A-204ENST00000467215 RRS1Q15050 365 aaKnown RBP27.1■■□□□ 1.93
FAM53A-204ENST00000467215 USP47Q96K76 1375 aa27.09■■□□□ 1.93
FAM53A-204ENST00000467215 C4BP0C0L5 1744 aa27.07■■□□□ 1.92
FAM53A-204ENST00000467215 ANKRD26Q9UPS8 1709 aa27.07■■□□□ 1.92
FAM53A-204ENST00000467215 UBR3Q6ZT12 1888 aa27.07■■□□□ 1.92
FAM53A-204ENST00000467215 NBPF6Q5VWK0 638 aa27.06■■□□□ 1.92
FAM53A-204ENST00000467215 NBPF4Q96M43 638 aa27.06■■□□□ 1.92
FAM53A-204ENST00000467215 GGNBP2Q9H3C7 697 aa27.05■■□□□ 1.92
FAM53A-204ENST00000467215 MSL1Q68DK7 614 aa27.04■■□□□ 1.92
FAM53A-204ENST00000467215 COL23A1Q86Y22 540 aaPredicted RBP27.04■■□□□ 1.92
FAM53A-204ENST00000467215 MSH5O43196 834 aa27.03■■□□□ 1.92
FAM53A-204ENST00000467215 YBX3P16989 372 aaKnown RBP eCLIP27.02■■□□□ 1.92
FAM53A-204ENST00000467215 PALLDQ8WX93 1383 aa27.01■■□□□ 1.91
FAM53A-204ENST00000467215 CGNL1Q0VF96 1302 aa27.01■■□□□ 1.91
FAM53A-204ENST00000467215 GIGYF1O75420 1035 aaPredicted RBP27.01■■□□□ 1.91
FAM53A-204ENST00000467215 RAPGEF4Q8WZA2 1011 aa27.01■■□□□ 1.91
FAM53A-204ENST00000467215 FLT4P35916 1363 aa27■■□□□ 1.91
FAM53A-204ENST00000467215 MAP2P11137 1827 aaKnown RBP27■■□□□ 1.91
FAM53A-204ENST00000467215 PCDH11XQ9BZA7 1347 aa27■■□□□ 1.91
FAM53A-204ENST00000467215 PCDH11YQ9BZA8 1340 aa27■■□□□ 1.91
FAM53A-204ENST00000467215 FYB1O15117 783 aa27■■□□□ 1.91
FAM53A-204ENST00000467215 INSRP06213 1382 aa26.99■■□□□ 1.91
FAM53A-204ENST00000467215 TATP17735 454 aaPredicted RBP26.98■■□□□ 1.91
FAM53A-204ENST00000467215 HSP90AB2PQ58FF8 381 aa26.96■■□□□ 1.91
FAM53A-204ENST00000467215 NCAPD2Q15021 1401 aa26.94■■□□□ 1.9
FAM53A-204ENST00000467215 KIF24Q5T7B8 1368 aa26.94■■□□□ 1.9
FAM53A-204ENST00000467215 ATP10DQ9P241 1426 aa26.93■■□□□ 1.9
FAM53A-204ENST00000467215 TMF1P82094 1093 aa26.93■■□□□ 1.9
FAM53A-204ENST00000467215 CYP27B1O15528 508 aa26.92■■□□□ 1.9
FAM53A-204ENST00000467215 SLC24A1O60721 1099 aa26.92■■□□□ 1.9
FAM53A-204ENST00000467215 MPRIPQ6WCQ1 1025 aa26.91■■□□□ 1.9
FAM53A-204ENST00000467215 NSD3Q9BZ95 1437 aa26.9■■□□□ 1.9
FAM53A-204ENST00000467215 GRIN3BO60391 1043 aa26.9■■□□□ 1.9
FAM53A-204ENST00000467215 AMIGO3Q86WK7 504 aa26.9■■□□□ 1.9
FAM53A-204ENST00000467215 EMILIN1Q9Y6C2 1016 aa26.89■■□□□ 1.9
FAM53A-204ENST00000467215 ADCY9O60503 1353 aa26.86■■□□□ 1.89
FAM53A-204ENST00000467215 KIAA1551Q9HCM1 1747 aa26.85■■□□□ 1.89
FAM53A-204ENST00000467215 SMIM5Q71RC9 77 aa26.85■■□□□ 1.89
FAM53A-204ENST00000467215 FLAD1Q8NFF5 587 aa26.85■■□□□ 1.89
FAM53A-204ENST00000467215 AK7Q96M32 723 aa26.85■■□□□ 1.89
FAM53A-204ENST00000467215 CD2APQ9Y5K6 639 aa26.85■■□□□ 1.89
FAM53A-204ENST00000467215 PHF14O94880 888 aa26.84■■□□□ 1.89
FAM53A-204ENST00000467215 KIF13BQ9NQT8 1826 aa26.83■■□□□ 1.89
FAM53A-204ENST00000467215 SMARCC1Q92922 1105 aaPredicted RBP26.82■■□□□ 1.88
FAM53A-204ENST00000467215 CICQ96RK0 1608 aaPredicted RBP26.82■■□□□ 1.88
FAM53A-204ENST00000467215 PIGBQ92521 554 aa26.81■■□□□ 1.88
FAM53A-204ENST00000467215 CARD14Q9BXL6 1004 aa26.81■■□□□ 1.88
FAM53A-204ENST00000467215 WWC3Q9ULE0 1092 aa26.81■■□□□ 1.88
FAM53A-204ENST00000467215 COL5A3P25940 1745 aaPredicted RBP26.81■■□□□ 1.88
FAM53A-204ENST00000467215 N4BP2Q86UW6 1770 aaPredicted RBP26.8■■□□□ 1.88
FAM53A-204ENST00000467215 CEP350Q5VT06 3117 aa26.8■■□□□ 1.88
FAM53A-204ENST00000467215 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.79■■□□□ 1.88
FAM53A-204ENST00000467215 IGSF1Q8N6C5 1336 aa26.79■■□□□ 1.88
FAM53A-204ENST00000467215 LINC00116Q8NCU8 138 aa26.78■■□□□ 1.88
FAM53A-204ENST00000467215 C4AP0C0L4 1744 aa26.77■■□□□ 1.88
FAM53A-204ENST00000467215 PPM1GO15355 546 aaPredicted RBP26.77■■□□□ 1.88
FAM53A-204ENST00000467215 CDCA8Q53HL2 280 aa26.77■■□□□ 1.88
FAM53A-204ENST00000467215 ZNF831Q5JPB2 1677 aa26.76■■□□□ 1.87
FAM53A-204ENST00000467215 NKX1-1Q15270 411 aaPredicted RBP26.76■■□□□ 1.87
FAM53A-204ENST00000467215 LOC102724428A0A0B4J2F2 783 aa26.75■■□□□ 1.87
FAM53A-204ENST00000467215 HMGB2P26583 209 aaKnown RBP26.75■■□□□ 1.87
FAM53A-204ENST00000467215 SSFA2P28290 1259 aa26.75■■□□□ 1.87
FAM53A-204ENST00000467215 SIK1P57059 783 aa26.75■■□□□ 1.87
FAM53A-204ENST00000467215 ZNF526Q8TF50 670 aaPredicted RBP26.75■■□□□ 1.87
FAM53A-204ENST00000467215 GPBP1L1Q9HC44 474 aaPredicted RBP26.75■■□□□ 1.87
FAM53A-204ENST00000467215 SPG7Q9UQ90 795 aa26.74■■□□□ 1.87
FAM53A-204ENST00000467215 BRCA1P38398 1863 aaKnown RBP26.74■■□□□ 1.87
FAM53A-204ENST00000467215 KDRP35968 1356 aa26.72■■□□□ 1.87
FAM53A-204ENST00000467215 WASHC2AQ641Q2 1341 aa26.72■■□□□ 1.87
FAM53A-204ENST00000467215 ITPK1Q13572 414 aa26.72■■□□□ 1.87
FAM53A-204ENST00000467215 EYA1Q99502 592 aa26.72■■□□□ 1.87
FAM53A-204ENST00000467215 TMOD3Q9NYL9 352 aa26.72■■□□□ 1.87
FAM53A-204ENST00000467215 PXDNLA1KZ92 1463 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms