RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 KDM2AQ9Y2K7 1162 aa8.17□□□□□ -1.1
CXXC4-202ENST00000466963 KTN1Q86UP2 1357 aaKnown RBP8.17□□□□□ -1.1
CXXC4-202ENST00000466963 RGPD5Q99666 1765 aa8.17□□□□□ -1.1
CXXC4-202ENST00000466963 PRELPP51888 382 aa8.16□□□□□ -1.1
CXXC4-202ENST00000466963 FAM182BQ5T319 152 aa8.16□□□□□ -1.1
CXXC4-202ENST00000466963 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.16□□□□□ -1.1
CXXC4-202ENST00000466963 TAF1LQ8IZX4 1826 aa8.16□□□□□ -1.1
CXXC4-202ENST00000466963 ARFGEF1Q9Y6D6 1849 aa8.16□□□□□ -1.1
CXXC4-202ENST00000466963 CD163L1Q9NR16 1453 aa8.16□□□□□ -1.1
CXXC4-202ENST00000466963 USP47Q96K76 1375 aa8.16□□□□□ -1.1
CXXC4-202ENST00000466963 SAFB2Q14151 953 aaKnown RBP eCLIP8.16□□□□□ -1.1
CXXC4-202ENST00000466963 DOT1LQ8TEK3 1739 aa8.16□□□□□ -1.1
CXXC4-202ENST00000466963 USP35Q9P2H5 1018 aa8.16□□□□□ -1.1
CXXC4-202ENST00000466963 PKD1L3Q7Z443 1732 aa8.15□□□□□ -1.1
CXXC4-202ENST00000466963 HIRIP3Q9BW71 556 aaPredicted RBP8.15□□□□□ -1.1
CXXC4-202ENST00000466963 NCAPD2Q15021 1401 aa8.15□□□□□ -1.1
CXXC4-202ENST00000466963 TFCP2L1Q9NZI6 479 aa8.15□□□□□ -1.11
CXXC4-202ENST00000466963 KDM2BQ8NHM5 1336 aa8.14□□□□□ -1.11
CXXC4-202ENST00000466963 PCDH11XQ9BZA7 1347 aa8.14□□□□□ -1.11
CXXC4-202ENST00000466963 PCDH11YQ9BZA8 1340 aa8.14□□□□□ -1.11
CXXC4-202ENST00000466963 C4BP0C0L5 1744 aa8.13□□□□□ -1.11
CXXC4-202ENST00000466963 CABP1Q9NZU7 370 aa8.13□□□□□ -1.11
CXXC4-202ENST00000466963 ZNF827Q17R98 1081 aa8.12□□□□□ -1.11
CXXC4-202ENST00000466963 RC3H1Q5TC82 1133 aaKnown RBP8.12□□□□□ -1.11
CXXC4-202ENST00000466963 ZCRB1Q8TBF4 217 aaKnown RBP8.12□□□□□ -1.11
CXXC4-202ENST00000466963 NKX1-1Q15270 411 aaPredicted RBP8.12□□□□□ -1.11
CXXC4-202ENST00000466963 ANKRD24Q8TF21 1146 aa8.12□□□□□ -1.11
CXXC4-202ENST00000466963 UBR3Q6ZT12 1888 aa8.12□□□□□ -1.11
CXXC4-202ENST00000466963 KLRG1Q96E93 195 aa8.12□□□□□ -1.11
CXXC4-202ENST00000466963 CCNL1Q9UK58 526 aaPredicted RBP8.12□□□□□ -1.11
CXXC4-202ENST00000466963 ANKRD26Q9UPS8 1709 aa8.11□□□□□ -1.11
CXXC4-202ENST00000466963 CDCA8Q53HL2 280 aa8.11□□□□□ -1.11
CXXC4-202ENST00000466963 C16orf71Q8IYS4 520 aaPredicted RBP8.11□□□□□ -1.11
CXXC4-202ENST00000466963 NLGN1Q8N2Q7 840 aa8.11□□□□□ -1.11
CXXC4-202ENST00000466963 NLRP2Q9NX02 1062 aa8.11□□□□□ -1.11
CXXC4-202ENST00000466963 KIF3CO14782 793 aa8.1□□□□□ -1.11
CXXC4-202ENST00000466963 HSP90AB1P08238 724 aaKnown RBP8.1□□□□□ -1.11
CXXC4-202ENST00000466963 SMC1BQ8NDV3 1235 aa8.1□□□□□ -1.11
CXXC4-202ENST00000466963 AXIN2Q9Y2T1 843 aa8.1□□□□□ -1.11
CXXC4-202ENST00000466963 CCDC87Q9NVE4 849 aa8.09□□□□□ -1.11
CXXC4-202ENST00000466963 KIAA1551Q9HCM1 1747 aa8.09□□□□□ -1.11
CXXC4-202ENST00000466963 INSRP06213 1382 aa8.09□□□□□ -1.11
CXXC4-202ENST00000466963 DNAJC5GQ8N7S2 189 aa8.09□□□□□ -1.11
CXXC4-202ENST00000466963 PRDM10Q9NQV6 1147 aa8.09□□□□□ -1.11
CXXC4-202ENST00000466963 TATP17735 454 aaPredicted RBP8.09□□□□□ -1.11
CXXC4-202ENST00000466963 LRRC4BQ9NT99 713 aa8.09□□□□□ -1.11
CXXC4-202ENST00000466963 TONSLQ96HA7 1378 aa8.08□□□□□ -1.12
CXXC4-202ENST00000466963 SLC34A2O95436 690 aa8.08□□□□□ -1.12
CXXC4-202ENST00000466963 C4AP0C0L4 1744 aa8.08□□□□□ -1.12
CXXC4-202ENST00000466963 BRCA1P38398 1863 aaKnown RBP8.08□□□□□ -1.12
CXXC4-202ENST00000466963 RGL2O15211 777 aa8.08□□□□□ -1.12
CXXC4-202ENST00000466963 YBX3P16989 372 aaKnown RBP eCLIP8.08□□□□□ -1.12
CXXC4-202ENST00000466963 NUTM2GQ5VZR2 741 aa8.08□□□□□ -1.12
CXXC4-202ENST00000466963 AK7Q96M32 723 aa8.08□□□□□ -1.12
CXXC4-202ENST00000466963 CABP2Q9NPB3 220 aa8.08□□□□□ -1.12
CXXC4-202ENST00000466963 WASHC2AQ641Q2 1341 aa8.08□□□□□ -1.12
CXXC4-202ENST00000466963 KDM6AO15550 1401 aaPredicted RBP8.07□□□□□ -1.12
CXXC4-202ENST00000466963 RAPGEF4Q8WZA2 1011 aa8.07□□□□□ -1.12
CXXC4-202ENST00000466963 MAP2P11137 1827 aaKnown RBP8.07□□□□□ -1.12
CXXC4-202ENST00000466963 IGSF1Q8N6C5 1336 aa8.07□□□□□ -1.12
CXXC4-202ENST00000466963 CNTNAP4Q9C0A0 1308 aa8.07□□□□□ -1.12
CXXC4-202ENST00000466963 COG3Q96JB2 828 aa8.07□□□□□ -1.12
CXXC4-202ENST00000466963 SPG7Q9UQ90 795 aa8.07□□□□□ -1.12
CXXC4-202ENST00000466963 ROCK2O75116 1388 aaKnown RBP8.07□□□□□ -1.12
CXXC4-202ENST00000466963 COL23A1Q86Y22 540 aaPredicted RBP8.07□□□□□ -1.12
CXXC4-202ENST00000466963 PALLDQ8WX93 1383 aa8.07□□□□□ -1.12
CXXC4-202ENST00000466963 FLT4P35916 1363 aa8.06□□□□□ -1.12
CXXC4-202ENST00000466963 TOGARAM1Q9Y4F4 1720 aa8.05□□□□□ -1.12
CXXC4-202ENST00000466963 KIF20BQ96Q89 1820 aa8.05□□□□□ -1.12
CXXC4-202ENST00000466963 DLEC1Q9Y238 1755 aa8.05□□□□□ -1.12
CXXC4-202ENST00000466963 ITGB4P16144 1822 aa8.05□□□□□ -1.12
CXXC4-202ENST00000466963 A0A1W2PP64 1363 aa8.05□□□□□ -1.12
CXXC4-202ENST00000466963 COL5A3P25940 1745 aaPredicted RBP8.04□□□□□ -1.12
CXXC4-202ENST00000466963 HOXC9P31274 260 aa8.04□□□□□ -1.12
CXXC4-202ENST00000466963 SOGA3Q5TF21 947 aa8.04□□□□□ -1.12
CXXC4-202ENST00000466963 ERVV-2B6SEH9 535 aa8.04□□□□□ -1.12
CXXC4-202ENST00000466963 PRIM1P49642 420 aaKnown RBP8.04□□□□□ -1.12
CXXC4-202ENST00000466963 TNS4Q8IZW8 715 aa8.04□□□□□ -1.12
CXXC4-202ENST00000466963 NLGN2Q8NFZ4 835 aa8.04□□□□□ -1.12
CXXC4-202ENST00000466963 DCAF5Q96JK2 942 aa8.03□□□□□ -1.12
CXXC4-202ENST00000466963 PDGFDQ9GZP0 370 aaPredicted RBP8.03□□□□□ -1.12
CXXC4-202ENST00000466963 LTBP3Q9NS15 1303 aa8.03□□□□□ -1.12
CXXC4-202ENST00000466963 PLEKHG5O94827 1062 aa8.03□□□□□ -1.12
CXXC4-202ENST00000466963 GRIPAP1Q4V328 841 aa8.03□□□□□ -1.12
CXXC4-202ENST00000466963 PELP1Q8IZL8 1130 aaKnown RBP8.03□□□□□ -1.12
CXXC4-202ENST00000466963 EP400Q96L91 3159 aa8.03□□□□□ -1.12
CXXC4-202ENST00000466963 NRXN2Q9P2S2 1712 aa8.02□□□□□ -1.13
CXXC4-202ENST00000466963 AMPHP49418 695 aa8.02□□□□□ -1.13
CXXC4-202ENST00000466963 ACSBG1Q96GR2 724 aa8.02□□□□□ -1.13
CXXC4-202ENST00000466963 KDRP35968 1356 aa8.02□□□□□ -1.13
CXXC4-202ENST00000466963 MEGF6O75095 1541 aa8.02□□□□□ -1.13
CXXC4-202ENST00000466963 PIM2Q9P1W9 311 aa8.01□□□□□ -1.13
CXXC4-202ENST00000466963 ZBTB7CA1YPR0 619 aa8.01□□□□□ -1.13
CXXC4-202ENST00000466963 PARP3Q9Y6F1 533 aa8.01□□□□□ -1.13
CXXC4-202ENST00000466963 TMF1P82094 1093 aa8□□□□□ -1.13
CXXC4-202ENST00000466963 PTF1AQ7RTS3 328 aa8□□□□□ -1.13
CXXC4-202ENST00000466963 POTEDQ86YR6 584 aa8□□□□□ -1.13
CXXC4-202ENST00000466963 ARFGEF2Q9Y6D5 1785 aa8□□□□□ -1.13
CXXC4-202ENST00000466963 RPS6KA4O75676 772 aa8□□□□□ -1.13
CXXC4-202ENST00000466963 RTCBQ9Y3I0 505 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms