RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 ATP5J2-PTCD1G3V325 749 aa7.31□□□□□ -1.24
GTF3C3-209ENST00000466862 PRKCSHP14314 528 aaPredicted RBP7.31□□□□□ -1.24
GTF3C3-209ENST00000466862 RNF144AP50876 292 aaPredicted RBP7.31□□□□□ -1.24
GTF3C3-209ENST00000466862 OSBPL3Q9H4L5 887 aa7.31□□□□□ -1.24
GTF3C3-209ENST00000466862 RNF20Q5VTR2 975 aa7.3□□□□□ -1.24
GTF3C3-209ENST00000466862 ZNF592Q92610 1267 aa7.3□□□□□ -1.24
GTF3C3-209ENST00000466862 CCDC85AQ96PX6 553 aaPredicted RBP7.3□□□□□ -1.24
GTF3C3-209ENST00000466862 GPC1P35052 558 aa7.29□□□□□ -1.24
GTF3C3-209ENST00000466862 MCM6Q14566 821 aa7.29□□□□□ -1.24
GTF3C3-209ENST00000466862 RNFT1Q5M7Z0 435 aa7.29□□□□□ -1.24
GTF3C3-209ENST00000466862 CUEDC1Q9NWM3 386 aaPredicted RBP7.29□□□□□ -1.24
GTF3C3-209ENST00000466862 ZNF330Q9Y3S2 320 aaPredicted RBP7.29□□□□□ -1.24
GTF3C3-209ENST00000466862 PCDHB11Q9Y5F2 797 aa7.29□□□□□ -1.24
GTF3C3-209ENST00000466862 GSK3AP49840 483 aa7.28□□□□□ -1.24
GTF3C3-209ENST00000466862 LYSMD3Q7Z3D4 306 aa7.28□□□□□ -1.24
GTF3C3-209ENST00000466862 CYP2U1Q7Z449 544 aa7.28□□□□□ -1.24
GTF3C3-209ENST00000466862 A0A1W2PRU2 124 aa7.27□□□□□ -1.25
GTF3C3-209ENST00000466862 CLN3Q13286 438 aa7.27□□□□□ -1.25
GTF3C3-209ENST00000466862 PHTF2Q8N3S3 785 aa7.27□□□□□ -1.25
GTF3C3-209ENST00000466862 COL25A1Q9BXS0 654 aaPredicted RBP7.27□□□□□ -1.25
GTF3C3-209ENST00000466862 CEP126Q9P2H0 1117 aa7.27□□□□□ -1.25
GTF3C3-209ENST00000466862 CHIC2Q9UKJ5 165 aa7.27□□□□□ -1.25
GTF3C3-209ENST00000466862 SUZ12Q15022 739 aaKnown RBP7.26□□□□□ -1.25
GTF3C3-209ENST00000466862 KCTD17Q8N5Z5 321 aa7.26□□□□□ -1.25
GTF3C3-209ENST00000466862 TRIM52Q96A61 297 aa7.26□□□□□ -1.25
GTF3C3-209ENST00000466862 CDCA7Q9BWT1 371 aaPredicted RBP7.26□□□□□ -1.25
GTF3C3-209ENST00000466862 HRH3Q9Y5N1 445 aa7.26□□□□□ -1.25
GTF3C3-209ENST00000466862 GAS6Q14393 721 aa7.25□□□□□ -1.25
GTF3C3-209ENST00000466862 CNTNAP3BQ96NU0 1288 aa7.25□□□□□ -1.25
GTF3C3-209ENST00000466862 CNTNAP3Q9BZ76 1288 aa7.25□□□□□ -1.25
GTF3C3-209ENST00000466862 GRIP2Q9C0E4 1043 aa7.25□□□□□ -1.25
GTF3C3-209ENST00000466862 ARHGEF10LQ9HCE6 1279 aa7.25□□□□□ -1.25
GTF3C3-209ENST00000466862 SPATA31C2B4DYI2 1134 aa7.24□□□□□ -1.25
GTF3C3-209ENST00000466862 MEN1O00255 615 aa7.24□□□□□ -1.25
GTF3C3-209ENST00000466862 IL2RAP01589 272 aa7.24□□□□□ -1.25
GTF3C3-209ENST00000466862 RHOQP17081 205 aa7.24□□□□□ -1.25
GTF3C3-209ENST00000466862 PRICKLE2Q7Z3G6 844 aa7.24□□□□□ -1.25
GTF3C3-209ENST00000466862 VWA5B2Q8N398 1253 aa7.24□□□□□ -1.25
GTF3C3-209ENST00000466862 ZNF837Q96EG3 531 aaPredicted RBP7.24□□□□□ -1.25
GTF3C3-209ENST00000466862 SLURP2P0DP57 97 aa7.23□□□□□ -1.25
GTF3C3-209ENST00000466862 GDPD2Q9HCC8 539 aa7.23□□□□□ -1.25
GTF3C3-209ENST00000466862 RAB6BQ9NRW1 208 aa7.23□□□□□ -1.25
GTF3C3-209ENST00000466862 CDC14CA4D256 554 aa7.22□□□□□ -1.25
GTF3C3-209ENST00000466862 VAC14Q08AM6 782 aa7.22□□□□□ -1.25
GTF3C3-209ENST00000466862 TSGA10IPQ3SY00 556 aa7.22□□□□□ -1.25
GTF3C3-209ENST00000466862 SV2AQ7L0J3 742 aa7.22□□□□□ -1.25
GTF3C3-209ENST00000466862 FHDC1Q9C0D6 1143 aaPredicted RBP7.22□□□□□ -1.25
GTF3C3-209ENST00000466862 GNRH1P01148 92 aa7.21□□□□□ -1.26
GTF3C3-209ENST00000466862 EIF4G2P78344 907 aaKnown RBP eCLIP7.21□□□□□ -1.26
GTF3C3-209ENST00000466862 ZNF385CQ66K41 422 aaPredicted RBP7.21□□□□□ -1.26
GTF3C3-209ENST00000466862 NBPF10Q6P3W6 841 aaKnown RBP7.21□□□□□ -1.26
GTF3C3-209ENST00000466862 NBPF15Q8N660 670 aa7.21□□□□□ -1.26
GTF3C3-209ENST00000466862 DYRK1BQ9Y463 629 aa7.21□□□□□ -1.26
GTF3C3-209ENST00000466862 THBS1P07996 1170 aa7.2□□□□□ -1.26
GTF3C3-209ENST00000466862 KCNMA1Q12791 1236 aa7.2□□□□□ -1.26
GTF3C3-209ENST00000466862 TRIM22Q8IYM9 498 aa7.2□□□□□ -1.26
GTF3C3-209ENST00000466862 WHAMMQ8TF30 809 aa7.2□□□□□ -1.26
GTF3C3-209ENST00000466862 ESYT1Q9BSJ8 1104 aa7.2□□□□□ -1.26
GTF3C3-209ENST00000466862 DOLKQ9UPQ8 538 aa7.2□□□□□ -1.26
GTF3C3-209ENST00000466862 COG6Q9Y2V7 657 aa7.2□□□□□ -1.26
GTF3C3-209ENST00000466862 STAU1O95793 577 aaKnown RBP7.19□□□□□ -1.26
GTF3C3-209ENST00000466862 ABL2P42684 1182 aa7.19□□□□□ -1.26
GTF3C3-209ENST00000466862 POU4F2Q12837 409 aa7.19□□□□□ -1.26
GTF3C3-209ENST00000466862 WDR44Q5JSH3 913 aa7.19□□□□□ -1.26
GTF3C3-209ENST00000466862 CNKSR1Q969H4 720 aa7.19□□□□□ -1.26
GTF3C3-209ENST00000466862 ETNK1Q9HBU6 452 aa7.19□□□□□ -1.26
GTF3C3-209ENST00000466862 PRM3Q9NNZ6 103 aa7.19□□□□□ -1.26
GTF3C3-209ENST00000466862 WASLO00401 505 aaPredicted RBP7.18□□□□□ -1.26
GTF3C3-209ENST00000466862 DBN1Q16643 649 aa7.18□□□□□ -1.26
GTF3C3-209ENST00000466862 SLC27A3Q5K4L6 730 aa7.18□□□□□ -1.26
GTF3C3-209ENST00000466862 RNF135Q8IUD6 432 aa7.18□□□□□ -1.26
GTF3C3-209ENST00000466862 XAGE2Q96GT9 111 aa7.18□□□□□ -1.26
GTF3C3-209ENST00000466862 GMCL1Q96IK5 515 aa7.18□□□□□ -1.26
GTF3C3-209ENST00000466862 NLRP3Q96P20 1036 aa7.18□□□□□ -1.26
GTF3C3-209ENST00000466862 ARHGEF15O94989 841 aa7.17□□□□□ -1.26
GTF3C3-209ENST00000466862 MYCP01106 439 aaPredicted RBP7.17□□□□□ -1.26
GTF3C3-209ENST00000466862 SCNN1DP51172 638 aa7.17□□□□□ -1.26
GTF3C3-209ENST00000466862 WASHC4Q2M389 1173 aa7.17□□□□□ -1.26
GTF3C3-209ENST00000466862 ADAMTS2O95450 1211 aa7.16□□□□□ -1.26
GTF3C3-209ENST00000466862 CENPCQ03188 943 aa7.16□□□□□ -1.26
GTF3C3-209ENST00000466862 SRSF11Q05519 484 aaKnown RBP7.16□□□□□ -1.26
GTF3C3-209ENST00000466862 SLFNL1Q499Z3 407 aa7.16□□□□□ -1.26
GTF3C3-209ENST00000466862 TAS1R3Q7RTX0 852 aa7.16□□□□□ -1.26
GTF3C3-209ENST00000466862 POM121Q96HA1 1249 aa7.16□□□□□ -1.26
GTF3C3-209ENST00000466862 ADAMTS8Q9UP79 889 aa7.16□□□□□ -1.26
GTF3C3-209ENST00000466862 GPR25O00155 361 aa7.15□□□□□ -1.26
GTF3C3-209ENST00000466862 SOX11P35716 441 aa7.15□□□□□ -1.26
GTF3C3-209ENST00000466862 RASSF7Q02833 373 aa7.15□□□□□ -1.26
GTF3C3-209ENST00000466862 UBAP2LQ14157 1087 aaKnown RBP7.15□□□□□ -1.26
GTF3C3-209ENST00000466862 OXLD1Q5BKU9 147 aa7.15□□□□□ -1.26
GTF3C3-209ENST00000466862 PLPP7Q8NBV4 271 aa7.15□□□□□ -1.26
GTF3C3-209ENST00000466862 PIK3CDO00329 1044 aa7.14□□□□□ -1.27
GTF3C3-209ENST00000466862 GDF11O95390 407 aa7.14□□□□□ -1.27
GTF3C3-209ENST00000466862 ZNF295-AS1Q8N0V1 137 aa7.14□□□□□ -1.27
GTF3C3-209ENST00000466862 MBIPQ9NS73 344 aa7.14□□□□□ -1.27
GTF3C3-209ENST00000466862 USP4Q13107 963 aa7.13□□□□□ -1.27
GTF3C3-209ENST00000466862 C4orf17Q53FE4 359 aa7.13□□□□□ -1.27
GTF3C3-209ENST00000466862 LYPD4Q6UWN0 246 aa7.13□□□□□ -1.27
GTF3C3-209ENST00000466862 TMEM151AQ8N4L1 468 aa7.13□□□□□ -1.27
GTF3C3-209ENST00000466862 SVOPQ8N4V2 548 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms