RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 ERVK-9P63128 1117 aa8.1□□□□□ -1.11
CCDC58-203ENST00000466854 RNFT1Q5M7Z0 435 aa8.1□□□□□ -1.11
CCDC58-203ENST00000466854 CNTNAP3BQ96NU0 1288 aa8.1□□□□□ -1.11
CCDC58-203ENST00000466854 CNTNAP3Q9BZ76 1288 aa8.1□□□□□ -1.11
CCDC58-203ENST00000466854 ATP5J2-PTCD1G3V325 749 aa8.09□□□□□ -1.11
CCDC58-203ENST00000466854 SCTRP47872 440 aa8.09□□□□□ -1.11
CCDC58-203ENST00000466854 COL25A1Q9BXS0 654 aaPredicted RBP8.09□□□□□ -1.11
CCDC58-203ENST00000466854 RNF144AP50876 292 aaPredicted RBP8.08□□□□□ -1.12
CCDC58-203ENST00000466854 CC2D2BQ6DHV5 1058 aa8.08□□□□□ -1.12
CCDC58-203ENST00000466854 LYSMD3Q7Z3D4 306 aa8.08□□□□□ -1.12
CCDC58-203ENST00000466854 VWA5B2Q8N398 1253 aa8.08□□□□□ -1.12
CCDC58-203ENST00000466854 RNF20Q5VTR2 975 aa8.07□□□□□ -1.12
CCDC58-203ENST00000466854 CCDC125Q86Z20 511 aa8.07□□□□□ -1.12
CCDC58-203ENST00000466854 CUEDC1Q9NWM3 386 aaPredicted RBP8.07□□□□□ -1.12
CCDC58-203ENST00000466854 A0A1W2PRU2 124 aa8.06□□□□□ -1.12
CCDC58-203ENST00000466854 CDC14CA4D256 554 aa8.06□□□□□ -1.12
CCDC58-203ENST00000466854 BTBD11A6QL63 1104 aa8.06□□□□□ -1.12
CCDC58-203ENST00000466854 MCCD1P59942 119 aaPredicted RBP8.06□□□□□ -1.12
CCDC58-203ENST00000466854 PRICKLE2Q7Z3G6 844 aa8.06□□□□□ -1.12
CCDC58-203ENST00000466854 TRAK2O60296 914 aa8.05□□□□□ -1.12
CCDC58-203ENST00000466854 RHOQP17081 205 aa8.05□□□□□ -1.12
CCDC58-203ENST00000466854 SV2AQ7L0J3 742 aa8.05□□□□□ -1.12
CCDC58-203ENST00000466854 OSBPL3Q9H4L5 887 aa8.05□□□□□ -1.12
CCDC58-203ENST00000466854 TBC1D2BQ9UPU7 963 aa8.05□□□□□ -1.12
CCDC58-203ENST00000466854 PCDHB11Q9Y5F2 797 aa8.05□□□□□ -1.12
CCDC58-203ENST00000466854 APBB1O00213 710 aa8.04□□□□□ -1.12
CCDC58-203ENST00000466854 MEN1O00255 615 aa8.04□□□□□ -1.12
CCDC58-203ENST00000466854 GPC1P35052 558 aa8.04□□□□□ -1.12
CCDC58-203ENST00000466854 TRIM52Q96A61 297 aa8.04□□□□□ -1.12
CCDC58-203ENST00000466854 ZNF330Q9Y3S2 320 aaPredicted RBP8.04□□□□□ -1.12
CCDC58-203ENST00000466854 CYP2U1Q7Z449 544 aa8.03□□□□□ -1.12
CCDC58-203ENST00000466854 ZNF592Q92610 1267 aa8.03□□□□□ -1.12
CCDC58-203ENST00000466854 CCDC85AQ96PX6 553 aaPredicted RBP8.03□□□□□ -1.12
CCDC58-203ENST00000466854 SLURP2P0DP57 97 aa8.02□□□□□ -1.13
CCDC58-203ENST00000466854 CLN3Q13286 438 aa8.02□□□□□ -1.13
CCDC58-203ENST00000466854 IRF5Q13568 498 aa8.02□□□□□ -1.13
CCDC58-203ENST00000466854 ZNF385CQ66K41 422 aaPredicted RBP8.02□□□□□ -1.13
CCDC58-203ENST00000466854 WHAMMQ8TF30 809 aa8.02□□□□□ -1.13
CCDC58-203ENST00000466854 ARHGEF10LQ9HCE6 1279 aa8.02□□□□□ -1.13
CCDC58-203ENST00000466854 CEP126Q9P2H0 1117 aa8.02□□□□□ -1.13
CCDC58-203ENST00000466854 GSK3AP49840 483 aa8.01□□□□□ -1.13
CCDC58-203ENST00000466854 GAS6Q14393 721 aa8.01□□□□□ -1.13
CCDC58-203ENST00000466854 LCE3BQ5TA77 95 aa8.01□□□□□ -1.13
CCDC58-203ENST00000466854 CDCA7Q9BWT1 371 aaPredicted RBP8.01□□□□□ -1.13
CCDC58-203ENST00000466854 GRIP2Q9C0E4 1043 aa8.01□□□□□ -1.13
CCDC58-203ENST00000466854 ZNF837Q96EG3 531 aaPredicted RBP8□□□□□ -1.13
CCDC58-203ENST00000466854 RAB6BQ9NRW1 208 aa8□□□□□ -1.13
CCDC58-203ENST00000466854 POU4F2Q12837 409 aa7.99□□□□□ -1.13
CCDC58-203ENST00000466854 NLRP3Q96P20 1036 aa7.99□□□□□ -1.13
CCDC58-203ENST00000466854 SPATA31C2B4DYI2 1134 aa7.98□□□□□ -1.13
CCDC58-203ENST00000466854 IL2RAP01589 272 aa7.98□□□□□ -1.13
CCDC58-203ENST00000466854 TSGA10IPQ3SY00 556 aa7.98□□□□□ -1.13
CCDC58-203ENST00000466854 SLC27A3Q5K4L6 730 aa7.98□□□□□ -1.13
CCDC58-203ENST00000466854 NBPF10Q6P3W6 841 aaKnown RBP7.98□□□□□ -1.13
CCDC58-203ENST00000466854 TRIM22Q8IYM9 498 aa7.98□□□□□ -1.13
CCDC58-203ENST00000466854 NBPF15Q8N660 670 aa7.98□□□□□ -1.13
CCDC58-203ENST00000466854 ADAMTS8Q9UP79 889 aa7.98□□□□□ -1.13
CCDC58-203ENST00000466854 DYRK1BQ9Y463 629 aa7.98□□□□□ -1.13
CCDC58-203ENST00000466854 ADAMTS2O95450 1211 aa7.97□□□□□ -1.13
CCDC58-203ENST00000466854 KCNMA1Q12791 1236 aa7.97□□□□□ -1.13
CCDC58-203ENST00000466854 DBN1Q16643 649 aa7.97□□□□□ -1.13
CCDC58-203ENST00000466854 PHTF2Q8N3S3 785 aa7.97□□□□□ -1.13
CCDC58-203ENST00000466854 SVOPQ8N4V2 548 aa7.97□□□□□ -1.13
CCDC58-203ENST00000466854 HRH3Q9Y5N1 445 aa7.97□□□□□ -1.13
CCDC58-203ENST00000466854 GPR25O00155 361 aa7.96□□□□□ -1.14
CCDC58-203ENST00000466854 ARHGEF15O94989 841 aa7.96□□□□□ -1.14
CCDC58-203ENST00000466854 GNRH1P01148 92 aa7.96□□□□□ -1.14
CCDC58-203ENST00000466854 KCTD17Q8N5Z5 321 aa7.96□□□□□ -1.14
CCDC58-203ENST00000466854 ESYT1Q9BSJ8 1104 aa7.96□□□□□ -1.14
CCDC58-203ENST00000466854 SRSF11Q05519 484 aaKnown RBP7.95□□□□□ -1.14
CCDC58-203ENST00000466854 VAC14Q08AM6 782 aa7.95□□□□□ -1.14
CCDC58-203ENST00000466854 RIPOR1Q6ZS17 1223 aa7.95□□□□□ -1.14
CCDC58-203ENST00000466854 CNKSR1Q969H4 720 aa7.95□□□□□ -1.14
CCDC58-203ENST00000466854 GMCL1Q96IK5 515 aa7.95□□□□□ -1.14
CCDC58-203ENST00000466854 GDPD2Q9HCC8 539 aa7.95□□□□□ -1.14
CCDC58-203ENST00000466854 WASLO00401 505 aaPredicted RBP7.94□□□□□ -1.14
CCDC58-203ENST00000466854 MYCP01106 439 aaPredicted RBP7.94□□□□□ -1.14
CCDC58-203ENST00000466854 EIF4G2P78344 907 aaKnown RBP eCLIP7.94□□□□□ -1.14
CCDC58-203ENST00000466854 CENPCQ03188 943 aa7.94□□□□□ -1.14
CCDC58-203ENST00000466854 WDR44Q5JSH3 913 aa7.94□□□□□ -1.14
CCDC58-203ENST00000466854 LYPD4Q6UWN0 246 aa7.94□□□□□ -1.14
CCDC58-203ENST00000466854 TAS1R3Q7RTX0 852 aa7.94□□□□□ -1.14
CCDC58-203ENST00000466854 GAS2L1Q99501 681 aaPredicted RBP7.94□□□□□ -1.14
CCDC58-203ENST00000466854 ESF1Q9H501 851 aaKnown RBP7.94□□□□□ -1.14
CCDC58-203ENST00000466854 CHIC2Q9UKJ5 165 aa7.94□□□□□ -1.14
CCDC58-203ENST00000466854 STAU1O95793 577 aaKnown RBP7.93□□□□□ -1.14
CCDC58-203ENST00000466854 MCM6Q14566 821 aa7.93□□□□□ -1.14
CCDC58-203ENST00000466854 GTPBP3Q969Y2 492 aaKnown RBP7.93□□□□□ -1.14
CCDC58-203ENST00000466854 XAGE2Q96GT9 111 aa7.93□□□□□ -1.14
CCDC58-203ENST00000466854 FHDC1Q9C0D6 1143 aaPredicted RBP7.93□□□□□ -1.14
CCDC58-203ENST00000466854 PRM3Q9NNZ6 103 aa7.93□□□□□ -1.14
CCDC58-203ENST00000466854 DOLKQ9UPQ8 538 aa7.93□□□□□ -1.14
CCDC58-203ENST00000466854 THBS1P07996 1170 aa7.92□□□□□ -1.14
CCDC58-203ENST00000466854 ABL2P42684 1182 aa7.92□□□□□ -1.14
CCDC58-203ENST00000466854 TIMMDC1Q9NPL8 285 aa7.92□□□□□ -1.14
CCDC58-203ENST00000466854 MBIPQ9NS73 344 aa7.92□□□□□ -1.14
CCDC58-203ENST00000466854 SLFNL1Q499Z3 407 aa7.91□□□□□ -1.14
CCDC58-203ENST00000466854 RNF135Q8IUD6 432 aa7.91□□□□□ -1.14
CCDC58-203ENST00000466854 ETNK1Q9HBU6 452 aa7.91□□□□□ -1.14
CCDC58-203ENST00000466854 H7C1W4 665 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms