RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 IL13P35225 146 aa18.67■□□□□ 0.58
UBA3-209ENST00000466763 DDX54Q8TDD1 881 aaKnown RBP18.67■□□□□ 0.58
UBA3-209ENST00000466763 LRRC37A3O60309 1634 aa18.66■□□□□ 0.58
UBA3-209ENST00000466763 SULT6B1Q6IMI4 303 aa18.65■□□□□ 0.58
UBA3-209ENST00000466763 ZCRB1Q8TBF4 217 aaKnown RBP18.65■□□□□ 0.58
UBA3-209ENST00000466763 KAT6BQ8WYB5 2073 aa18.65■□□□□ 0.58
UBA3-209ENST00000466763 MEGF6O75095 1541 aa18.64■□□□□ 0.58
UBA3-209ENST00000466763 FAM196AQ6ZSG2 479 aa18.64■□□□□ 0.57
UBA3-209ENST00000466763 MARCH10Q8NA82 808 aaPredicted RBP18.64■□□□□ 0.57
UBA3-209ENST00000466763 IGSF1Q8N6C5 1336 aa18.64■□□□□ 0.57
UBA3-209ENST00000466763 HMOX1P09601 288 aa18.63■□□□□ 0.57
UBA3-209ENST00000466763 AEBP1Q8IUX7 1158 aa18.63■□□□□ 0.57
UBA3-209ENST00000466763 UPF1Q92900 1129 aaKnown RBP eCLIP18.63■□□□□ 0.57
UBA3-209ENST00000466763 PRKRIP1Q9H875 184 aaPredicted RBP18.63■□□□□ 0.57
UBA3-209ENST00000466763 NUDCQ9Y266 331 aa18.63■□□□□ 0.57
UBA3-209ENST00000466763 MYBBP1AQ9BQG0 1328 aaKnown RBP18.63■□□□□ 0.57
UBA3-209ENST00000466763 TNS2Q63HR2 1409 aa18.63■□□□□ 0.57
UBA3-209ENST00000466763 OVOS2A0A0G2JMS6 1433 aa18.61■□□□□ 0.57
UBA3-209ENST00000466763 ANP32CO43423 234 aa18.61■□□□□ 0.57
UBA3-209ENST00000466763 SF3B2Q13435 895 aaKnown RBP18.61■□□□□ 0.57
UBA3-209ENST00000466763 SPG7Q9UQ90 795 aa18.6■□□□□ 0.57
UBA3-209ENST00000466763 COL3A1P02461 1466 aaPredicted RBP18.59■□□□□ 0.57
UBA3-209ENST00000466763 NCAPD2Q15021 1401 aa18.59■□□□□ 0.57
UBA3-209ENST00000466763 TRIM37O94972 964 aa18.59■□□□□ 0.57
UBA3-209ENST00000466763 U2AF1L5P0DN76 240 aaPredicted RBP18.59■□□□□ 0.57
UBA3-209ENST00000466763 U2AF1Q01081 240 aaKnown RBP eCLIP18.59■□□□□ 0.57
UBA3-209ENST00000466763 NPM3O75607 178 aaKnown RBP18.58■□□□□ 0.56
UBA3-209ENST00000466763 PLEKHO1Q53GL0 409 aaPredicted RBP18.58■□□□□ 0.56
UBA3-209ENST00000466763 ACSBG1Q96GR2 724 aa18.58■□□□□ 0.56
UBA3-209ENST00000466763 PCDH11XQ9BZA7 1347 aa18.56■□□□□ 0.56
UBA3-209ENST00000466763 PCDH11YQ9BZA8 1340 aa18.56■□□□□ 0.56
UBA3-209ENST00000466763 RGPD1P0DJD0 1748 aa18.56■□□□□ 0.56
UBA3-209ENST00000466763 CCDC125Q86Z20 511 aa18.55■□□□□ 0.56
UBA3-209ENST00000466763 CYP27B1O15528 508 aa18.54■□□□□ 0.56
UBA3-209ENST00000466763 AMOTQ4VCS5 1084 aa18.54■□□□□ 0.56
UBA3-209ENST00000466763 ZNF530Q6P9A1 599 aaPredicted RBP18.54■□□□□ 0.56
UBA3-209ENST00000466763 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.54■□□□□ 0.561e-8■■■□□ 18.2
UBA3-209ENST00000466763 KDRP35968 1356 aa18.54■□□□□ 0.56
UBA3-209ENST00000466763 APBA3O96018 575 aa18.53■□□□□ 0.56
UBA3-209ENST00000466763 SYTL4Q96C24 671 aaPredicted RBP18.53■□□□□ 0.56
UBA3-209ENST00000466763 SHANK3Q9BYB0 1731 aa18.52■□□□□ 0.56
UBA3-209ENST00000466763 IFNL2Q8IZJ0 200 aa18.52■□□□□ 0.56
UBA3-209ENST00000466763 PKD1L3Q7Z443 1732 aa18.52■□□□□ 0.55
UBA3-209ENST00000466763 KCNQ2O43526 872 aa18.51■□□□□ 0.55
UBA3-209ENST00000466763 PRKAR2BP31323 418 aa18.51■□□□□ 0.55
UBA3-209ENST00000466763 BAG6P46379 1132 aa18.51■□□□□ 0.55
UBA3-209ENST00000466763 C1orf141Q5JVX7 400 aa18.51■□□□□ 0.55
UBA3-209ENST00000466763 DEFB132Q7Z7B7 95 aa18.51■□□□□ 0.55
UBA3-209ENST00000466763 SBF2Q86WG5 1849 aa18.51■□□□□ 0.55
UBA3-209ENST00000466763 PHKG2P15735 406 aa18.5■□□□□ 0.55
UBA3-209ENST00000466763 PRIM1P49642 420 aaKnown RBP18.5■□□□□ 0.55
UBA3-209ENST00000466763 WDR43Q15061 677 aaKnown RBP eCLIP18.5■□□□□ 0.55
UBA3-209ENST00000466763 PTF1AQ7RTS3 328 aa18.5■□□□□ 0.55
UBA3-209ENST00000466763 BCL11BQ9C0K0 894 aaPredicted RBP18.5■□□□□ 0.55
UBA3-209ENST00000466763 NEFMP07197 916 aa18.49■□□□□ 0.55
UBA3-209ENST00000466763 RSPH6AQ9H0K4 717 aa18.49■□□□□ 0.55
UBA3-209ENST00000466763 FCHSD2O94868 740 aa18.48■□□□□ 0.55
UBA3-209ENST00000466763 EN1Q05925 392 aaPredicted RBP18.48■□□□□ 0.55
UBA3-209ENST00000466763 BCL9O00512 1426 aa18.48■□□□□ 0.55
UBA3-209ENST00000466763 MTHFSDQ2M296 383 aaKnown RBP18.47■□□□□ 0.55
UBA3-209ENST00000466763 PLEKHG2Q9H7P9 1386 aa18.46■□□□□ 0.55
UBA3-209ENST00000466763 HSP90AB1P08238 724 aaKnown RBP18.46■□□□□ 0.55
UBA3-209ENST00000466763 PHACTR3Q96KR7 559 aa18.46■□□□□ 0.55
UBA3-209ENST00000466763 DOT1LQ8TEK3 1739 aa18.46■□□□□ 0.55
UBA3-209ENST00000466763 NKX1-1Q15270 411 aaPredicted RBP18.45■□□□□ 0.54
UBA3-209ENST00000466763 CCDC184Q52MB2 194 aa18.45■□□□□ 0.54
UBA3-209ENST00000466763 AKAP4Q5JQC9 854 aa18.45■□□□□ 0.54
UBA3-209ENST00000466763 MPRIPQ6WCQ1 1025 aa18.45■□□□□ 0.54
UBA3-209ENST00000466763 GAS2L2Q8NHY3 880 aa18.45■□□□□ 0.54
UBA3-209ENST00000466763 PNNQ9H307 717 aaKnown RBP18.45■□□□□ 0.54
UBA3-209ENST00000466763 TNS1Q9HBL0 1735 aaKnown RBP18.45■□□□□ 0.54
UBA3-209ENST00000466763 MRS2Q9HD23 443 aa18.44■□□□□ 0.54
UBA3-209ENST00000466763 EP400Q96L91 3159 aa18.43■□□□□ 0.54
UBA3-209ENST00000466763 EZH2Q15910 746 aaKnown RBP18.43■□□□□ 0.54
UBA3-209ENST00000466763 DIEXFQ68CQ4 756 aaKnown RBP18.43■□□□□ 0.54
UBA3-209ENST00000466763 DCAF5Q96JK2 942 aa18.43■□□□□ 0.54
UBA3-209ENST00000466763 NHSQ6T4R5 1651 aa18.43■□□□□ 0.54
UBA3-209ENST00000466763 MAPK8IP3Q9UPT6 1336 aa18.43■□□□□ 0.54
UBA3-209ENST00000466763 CABP4P57796 275 aa18.41■□□□□ 0.54
UBA3-209ENST00000466763 CCDC146Q8IYE0 955 aa18.41■□□□□ 0.54
UBA3-209ENST00000466763 TMOD3Q9NYL9 352 aa18.41■□□□□ 0.54
UBA3-209ENST00000466763 ADAMTS8Q9UP79 889 aa18.41■□□□□ 0.54
UBA3-209ENST00000466763 BTAF1O14981 1849 aa18.41■□□□□ 0.54
UBA3-209ENST00000466763 GNAT3A8MTJ3 354 aa18.4■□□□□ 0.54
UBA3-209ENST00000466763 CAMKK2Q96RR4 588 aa18.4■□□□□ 0.54
UBA3-209ENST00000466763 ITGB4P16144 1822 aa18.39■□□□□ 0.54
UBA3-209ENST00000466763 PIGBQ92521 554 aa18.39■□□□□ 0.53
UBA3-209ENST00000466763 LGR6Q9HBX8 967 aa18.39■□□□□ 0.53
UBA3-209ENST00000466763 TOGARAM1Q9Y4F4 1720 aa18.39■□□□□ 0.53
UBA3-209ENST00000466763 ERVV-2B6SEH9 535 aa18.38■□□□□ 0.53
UBA3-209ENST00000466763 PLSCR1O15162 318 aa18.38■□□□□ 0.53
UBA3-209ENST00000466763 RNMTO43148 476 aaKnown RBP18.38■□□□□ 0.53
UBA3-209ENST00000466763 RTF1Q92541 710 aaKnown RBP18.38■□□□□ 0.53
UBA3-209ENST00000466763 PLEKHF1Q96S99 279 aa18.38■□□□□ 0.53
UBA3-209ENST00000466763 MAP3K5Q99683 1374 aa18.38■□□□□ 0.53
UBA3-209ENST00000466763 KDM6AO15550 1401 aaPredicted RBP18.38■□□□□ 0.53
UBA3-209ENST00000466763 NFATC2IPQ8NCF5 419 aa18.36■□□□□ 0.53
UBA3-209ENST00000466763 NFE2L2Q16236 605 aa18.35■□□□□ 0.53
UBA3-209ENST00000466763 TXNRD1Q16881 649 aa18.35■□□□□ 0.53
UBA3-209ENST00000466763 RUNDC1Q96C34 613 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms