RNA–Protein interactions for RNA: ENST00000466322.5

RAPGEF3-206, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-206ENST00000466322 BCL9O00512 1426 aa22.65■■□□□ 1.22
RAPGEF3-206ENST00000466322 NHSQ6T4R5 1651 aa22.64■■□□□ 1.21
RAPGEF3-206ENST00000466322 RREB1Q92766 1687 aa22.64■■□□□ 1.21
RAPGEF3-206ENST00000466322 TATP17735 454 aaPredicted RBP22.63■■□□□ 1.21
RAPGEF3-206ENST00000466322 EIF4A2Q14240 407 aaKnown RBP22.63■■□□□ 1.21
RAPGEF3-206ENST00000466322 EYA1Q99502 592 aa22.63■■□□□ 1.21
RAPGEF3-206ENST00000466322 NUP188Q5SRE5 1749 aa22.62■■□□□ 1.21
RAPGEF3-206ENST00000466322 PSDA5PKW4 1024 aaPredicted RBP22.61■■□□□ 1.21
RAPGEF3-206ENST00000466322 BTAF1O14981 1849 aa22.61■■□□□ 1.21
RAPGEF3-206ENST00000466322 DOT1LQ8TEK3 1739 aa22.6■■□□□ 1.21
RAPGEF3-206ENST00000466322 RGPD3A6NKT7 1758 aaPredicted RBP22.58■■□□□ 1.21
RAPGEF3-206ENST00000466322 RGPD4Q7Z3J3 1758 aa22.58■■□□□ 1.21
RAPGEF3-206ENST00000466322 PARD3Q8TEW0 1356 aa22.58■■□□□ 1.21
RAPGEF3-206ENST00000466322 PLSCR1O15162 318 aa22.57■■□□□ 1.2
RAPGEF3-206ENST00000466322 PKD1L3Q7Z443 1732 aa22.56■■□□□ 1.2
RAPGEF3-206ENST00000466322 NCAPD2Q15021 1401 aa22.56■■□□□ 1.2
RAPGEF3-206ENST00000466322 MTHFSP49914 203 aa22.55■■□□□ 1.2
RAPGEF3-206ENST00000466322 R3HDM1Q15032 1099 aaKnown RBP22.55■■□□□ 1.2
RAPGEF3-206ENST00000466322 SYTL4Q96C24 671 aaPredicted RBP22.55■■□□□ 1.2
RAPGEF3-206ENST00000466322 PROM2Q8N271 834 aa22.54■■□□□ 1.2
RAPGEF3-206ENST00000466322 PRIM1P49642 420 aaKnown RBP22.53■■□□□ 1.2
RAPGEF3-206ENST00000466322 CYP27B1O15528 508 aa22.52■■□□□ 1.2
RAPGEF3-206ENST00000466322 IGSF1Q8N6C5 1336 aa22.52■■□□□ 1.2
RAPGEF3-206ENST00000466322 PCDH11XQ9BZA7 1347 aa22.52■■□□□ 1.2
RAPGEF3-206ENST00000466322 PCDH11YQ9BZA8 1340 aa22.52■■□□□ 1.2
RAPGEF3-206ENST00000466322 NPC1L1Q9UHC9 1359 aa22.51■■□□□ 1.19
RAPGEF3-206ENST00000466322 ITGB4P16144 1822 aa22.5■■□□□ 1.19
RAPGEF3-206ENST00000466322 TXNRD1Q16881 649 aa22.5■■□□□ 1.19
RAPGEF3-206ENST00000466322 NBPF14Q5TI25 921 aa22.5■■□□□ 1.19
RAPGEF3-206ENST00000466322 SPG7Q9UQ90 795 aa22.5■■□□□ 1.19
RAPGEF3-206ENST00000466322 IL13P35225 146 aa22.49■■□□□ 1.19
RAPGEF3-206ENST00000466322 AEBP1Q8IUX7 1158 aa22.49■■□□□ 1.19
RAPGEF3-206ENST00000466322 TOGARAM1Q9Y4F4 1720 aa22.48■■□□□ 1.19
RAPGEF3-206ENST00000466322 SULT6B1Q6IMI4 303 aa22.46■■□□□ 1.19
RAPGEF3-206ENST00000466322 ANO8Q9HCE9 1232 aaPredicted RBP22.45■■□□□ 1.18
RAPGEF3-206ENST00000466322 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.44■■□□□ 1.18
RAPGEF3-206ENST00000466322 LY75O60449 1722 aa22.43■■□□□ 1.18
RAPGEF3-206ENST00000466322 DIAPH1O60610 1272 aaKnown RBP22.43■■□□□ 1.18
RAPGEF3-206ENST00000466322 MPRIPQ6WCQ1 1025 aa22.43■■□□□ 1.18
RAPGEF3-206ENST00000466322 HMOX1P09601 288 aa22.42■■□□□ 1.18
RAPGEF3-206ENST00000466322 PHKG2P15735 406 aa22.42■■□□□ 1.18
RAPGEF3-206ENST00000466322 KCNQ4P56696 695 aa22.42■■□□□ 1.18
RAPGEF3-206ENST00000466322 IFNL2Q8IZJ0 200 aa22.42■■□□□ 1.18
RAPGEF3-206ENST00000466322 NKX1-1Q15270 411 aaPredicted RBP22.41■■□□□ 1.18
RAPGEF3-206ENST00000466322 PLEKHO1Q53GL0 409 aaPredicted RBP22.41■■□□□ 1.18
RAPGEF3-206ENST00000466322 LRRC4BQ9NT99 713 aa22.41■■□□□ 1.18
RAPGEF3-206ENST00000466322 DDX10Q13206 875 aaKnown RBP22.39■■□□□ 1.17
RAPGEF3-206ENST00000466322 COL3A1P02461 1466 aaPredicted RBP22.39■■□□□ 1.17
RAPGEF3-206ENST00000466322 PPP2R1AP30153 589 aa22.38■■□□□ 1.17
RAPGEF3-206ENST00000466322 ZNF530Q6P9A1 599 aaPredicted RBP22.38■■□□□ 1.17
RAPGEF3-206ENST00000466322 STK32BQ9NY57 414 aa22.38■■□□□ 1.17
RAPGEF3-206ENST00000466322 KDRP35968 1356 aa22.38■■□□□ 1.17
RAPGEF3-206ENST00000466322 U2SURPO15042 1029 aaKnown RBP22.37■■□□□ 1.17
RAPGEF3-206ENST00000466322 ZEB1P37275 1124 aaPredicted RBP22.37■■□□□ 1.17
RAPGEF3-206ENST00000466322 AMOTQ4VCS5 1084 aa22.37■■□□□ 1.17
RAPGEF3-206ENST00000466322 VIRMAQ69YN4 1812 aaKnown RBP22.36■■□□□ 1.17
RAPGEF3-206ENST00000466322 PAPPAQ13219 1627 aa22.36■■□□□ 1.17
RAPGEF3-206ENST00000466322 SLC15A2Q16348 729 aa22.36■■□□□ 1.17
RAPGEF3-206ENST00000466322 PIGBQ92521 554 aa22.36■■□□□ 1.17
RAPGEF3-206ENST00000466322 PDGFDQ9GZP0 370 aaPredicted RBP22.36■■□□□ 1.17
RAPGEF3-206ENST00000466322 LRP5O75197 1615 aa22.35■■□□□ 1.17
RAPGEF3-206ENST00000466322 SLC27A3Q5K4L6 730 aa22.34■■□□□ 1.17
RAPGEF3-206ENST00000466322 CASZ1Q86V15 1759 aa22.34■■□□□ 1.17
RAPGEF3-206ENST00000466322 PLEKHG2Q9H7P9 1386 aa22.34■■□□□ 1.17
RAPGEF3-206ENST00000466322 ZNF827Q17R98 1081 aa22.33■■□□□ 1.17
RAPGEF3-206ENST00000466322 CFAP53Q96M91 514 aa22.33■■□□□ 1.17
RAPGEF3-206ENST00000466322 TMOD3Q9NYL9 352 aa22.33■■□□□ 1.17
RAPGEF3-206ENST00000466322 CCNL1Q9UK58 526 aaPredicted RBP22.33■■□□□ 1.17
RAPGEF3-206ENST00000466322 TAF1LQ8IZX4 1826 aa22.32■■□□□ 1.16
RAPGEF3-206ENST00000466322 C1orf141Q5JVX7 400 aa22.32■■□□□ 1.16
RAPGEF3-206ENST00000466322 TUBGCP6Q96RT7 1819 aa22.31■■□□□ 1.16
RAPGEF3-206ENST00000466322 SCN11AQ9UI33 1791 aa22.31■■□□□ 1.16
RAPGEF3-206ENST00000466322 PALLDQ8WX93 1383 aa22.31■■□□□ 1.16
RAPGEF3-206ENST00000466322 DCAF5Q96JK2 942 aa22.31■■□□□ 1.16
RAPGEF3-206ENST00000466322 SRCAPQ6ZRS2 3230 aa22.31■■□□□ 1.16
RAPGEF3-206ENST00000466322 C5P01031 1676 aa22.3■■□□□ 1.16
RAPGEF3-206ENST00000466322 HSP90AB1P08238 724 aaKnown RBP22.3■■□□□ 1.16
RAPGEF3-206ENST00000466322 KDM6AO15550 1401 aaPredicted RBP22.3■■□□□ 1.16
RAPGEF3-206ENST00000466322 ASAP1Q9ULH1 1129 aa22.29■■□□□ 1.16
RAPGEF3-206ENST00000466322 MTHFSDQ2M296 383 aaKnown RBP22.28■■□□□ 1.16
RAPGEF3-206ENST00000466322 SMARCC1Q92922 1105 aaPredicted RBP22.28■■□□□ 1.16
RAPGEF3-206ENST00000466322 AKT1S1Q96B36 256 aa22.28■■□□□ 1.16
RAPGEF3-206ENST00000466322 ERVV-2B6SEH9 535 aa22.27■■□□□ 1.16
RAPGEF3-206ENST00000466322 ZBTB7AO95365 584 aa22.27■■□□□ 1.16
RAPGEF3-206ENST00000466322 CABP4P57796 275 aa22.26■■□□□ 1.15
RAPGEF3-206ENST00000466322 ATG3Q9NT62 314 aa22.26■■□□□ 1.15
RAPGEF3-206ENST00000466322 QSER1Q2KHR3 1735 aa22.26■■□□□ 1.15
RAPGEF3-206ENST00000466322 AKAP4Q5JQC9 854 aa22.25■■□□□ 1.15
RAPGEF3-206ENST00000466322 LGR6Q9HBX8 967 aa22.25■■□□□ 1.15
RAPGEF3-206ENST00000466322 SPON1Q9HCB6 807 aa22.25■■□□□ 1.15
RAPGEF3-206ENST00000466322 NUDCQ9Y266 331 aa22.25■■□□□ 1.15
RAPGEF3-206ENST00000466322 ATF5Q9Y2D1 282 aaPredicted RBP22.25■■□□□ 1.15
RAPGEF3-206ENST00000466322 U2AF1L5P0DN76 240 aaPredicted RBP22.24■■□□□ 1.15
RAPGEF3-206ENST00000466322 U2AF1Q01081 240 aaKnown RBP eCLIP22.24■■□□□ 1.15
RAPGEF3-206ENST00000466322 NFATC2IPQ8NCF5 419 aa22.24■■□□□ 1.15
RAPGEF3-206ENST00000466322 TFCP2L1Q9NZI6 479 aa22.24■■□□□ 1.15
RAPGEF3-206ENST00000466322 LOC102724428A0A0B4J2F2 783 aa22.22■■□□□ 1.15
RAPGEF3-206ENST00000466322 PRKAR2BP31323 418 aa22.22■■□□□ 1.15
RAPGEF3-206ENST00000466322 SIK1P57059 783 aa22.22■■□□□ 1.15
RAPGEF3-206ENST00000466322 C4BP0C0L5 1744 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms