RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 ERVH48-1M5A8F1 160 aa5.76□□□□□ -1.49
CCDC93-205ENST00000466171 RFC5P40937 340 aa5.76□□□□□ -1.49
CCDC93-205ENST00000466171 PTGIRP43119 386 aa5.76□□□□□ -1.49
CCDC93-205ENST00000466171 MARSP56192 900 aaKnown RBP5.76□□□□□ -1.49
CCDC93-205ENST00000466171 TMEM259Q4ZIN3 620 aa5.76□□□□□ -1.49
CCDC93-205ENST00000466171 CCDC125Q86Z20 511 aa5.76□□□□□ -1.49
CCDC93-205ENST00000466171 RNF217Q8TC41 542 aa5.76□□□□□ -1.49
CCDC93-205ENST00000466171 SCARF2Q96GP6 870 aaPredicted RBP5.76□□□□□ -1.49
CCDC93-205ENST00000466171 OCSTAMPQ9BR26 566 aa5.76□□□□□ -1.49
CCDC93-205ENST00000466171 FBXO31Q5XUX0 539 aaPredicted RBP5.75□□□□□ -1.49
CCDC93-205ENST00000466171 LYSMD3Q7Z3D4 306 aa5.75□□□□□ -1.49
CCDC93-205ENST00000466171 EPS8L1Q8TE68 723 aa5.75□□□□□ -1.49
CCDC93-205ENST00000466171 ZNF592Q92610 1267 aa5.75□□□□□ -1.49
CCDC93-205ENST00000466171 HMX1Q9NP08 348 aaPredicted RBP5.75□□□□□ -1.49
CCDC93-205ENST00000466171 ESPNB1AK53 854 aa5.74□□□□□ -1.49
CCDC93-205ENST00000466171 K7ELQ4 463 aaPredicted RBP5.74□□□□□ -1.49
CCDC93-205ENST00000466171 DCAF5Q96JK2 942 aa5.74□□□□□ -1.49
CCDC93-205ENST00000466171 KRTAP9-9Q9BYP9 154 aa5.74□□□□□ -1.49
CCDC93-205ENST00000466171 KRTAP9-4Q9BYQ2 154 aa5.74□□□□□ -1.49
CCDC93-205ENST00000466171 GOPCQ9HD26 462 aa5.74□□□□□ -1.49
CCDC93-205ENST00000466171 ZBBXA8MT70 800 aa5.73□□□□□ -1.49
CCDC93-205ENST00000466171 LILRA1O75019 489 aa5.73□□□□□ -1.49
CCDC93-205ENST00000466171 MAP3K10Q02779 954 aa5.73□□□□□ -1.49
CCDC93-205ENST00000466171 RNF20Q5VTR2 975 aa5.73□□□□□ -1.49
CCDC93-205ENST00000466171 CYLDQ9NQC7 956 aa5.73□□□□□ -1.49
CCDC93-205ENST00000466171 ZNF330Q9Y3S2 320 aaPredicted RBP5.73□□□□□ -1.49
CCDC93-205ENST00000466171 PCDHB9Q9Y5E1 797 aa5.73□□□□□ -1.49
CCDC93-205ENST00000466171 ATP5J2-PTCD1G3V325 749 aa5.72□□□□□ -1.49
CCDC93-205ENST00000466171 ADD1P35611 737 aaKnown RBP5.72□□□□□ -1.49
CCDC93-205ENST00000466171 MCCD1P59942 119 aaPredicted RBP5.72□□□□□ -1.49
CCDC93-205ENST00000466171 FOXD4L5Q5VV16 416 aaPredicted RBP5.72□□□□□ -1.49
CCDC93-205ENST00000466171 FOXR1Q6PIV2 292 aa5.72□□□□□ -1.49
CCDC93-205ENST00000466171 GMCL1Q96IK5 515 aa5.72□□□□□ -1.49
CCDC93-205ENST00000466171 ESF1Q9H501 851 aaKnown RBP5.72□□□□□ -1.49
CCDC93-205ENST00000466171 GPC1P35052 558 aa5.71□□□□□ -1.5
CCDC93-205ENST00000466171 RNF144AP50876 292 aaPredicted RBP5.71□□□□□ -1.5
CCDC93-205ENST00000466171 PRICKLE2Q7Z3G6 844 aa5.71□□□□□ -1.5
CCDC93-205ENST00000466171 GALNT6Q8NCL4 622 aa5.71□□□□□ -1.5
CCDC93-205ENST00000466171 ENAMQ9NRM1 1142 aa5.71□□□□□ -1.5
CCDC93-205ENST00000466171 SENP3-EIF4A1A0A087X0R7 540 aa5.7□□□□□ -1.5
CCDC93-205ENST00000466171 SRSF11Q05519 484 aaKnown RBP5.7□□□□□ -1.5
CCDC93-205ENST00000466171 NLRP3Q96P20 1036 aa5.7□□□□□ -1.5
CCDC93-205ENST00000466171 H7C1W4 665 aa5.69□□□□□ -1.5
CCDC93-205ENST00000466171 APBB1O00213 710 aa5.69□□□□□ -1.5
CCDC93-205ENST00000466171 MEN1O00255 615 aa5.69□□□□□ -1.5
CCDC93-205ENST00000466171 GIGYF1O75420 1035 aaPredicted RBP5.69□□□□□ -1.5
CCDC93-205ENST00000466171 ADAMTS2O95450 1211 aa5.69□□□□□ -1.5
CCDC93-205ENST00000466171 RHOQP17081 205 aa5.69□□□□□ -1.5
CCDC93-205ENST00000466171 SLC27A3Q5K4L6 730 aa5.69□□□□□ -1.5
CCDC93-205ENST00000466171 CC2D2BQ6DHV5 1058 aa5.69□□□□□ -1.5
CCDC93-205ENST00000466171 LYPD4Q6UWN0 246 aa5.69□□□□□ -1.5
CCDC93-205ENST00000466171 TRIM34Q9BYJ4 488 aa5.69□□□□□ -1.5
CCDC93-205ENST00000466171 KRTAP4-8A0A0G2JLE6 195 aa5.68□□□□□ -1.5
CCDC93-205ENST00000466171 FBXO45P0C2W1 286 aa5.68□□□□□ -1.5
CCDC93-205ENST00000466171 NEUROD2Q15784 382 aa5.68□□□□□ -1.5
CCDC93-205ENST00000466171 RIPOR1Q6ZS17 1223 aa5.68□□□□□ -1.5
CCDC93-205ENST00000466171 CYP2U1Q7Z449 544 aa5.68□□□□□ -1.5
CCDC93-205ENST00000466171 KDF1Q8NAX2 398 aaPredicted RBP5.68□□□□□ -1.5
CCDC93-205ENST00000466171 TRERF1Q96PN7 1200 aa5.68□□□□□ -1.5
CCDC93-205ENST00000466171 NR1H3Q13133 447 aa5.67□□□□□ -1.5
CCDC93-205ENST00000466171 TRIM22Q8IYM9 498 aa5.67□□□□□ -1.5
CCDC93-205ENST00000466171 MBIPQ9NS73 344 aa5.67□□□□□ -1.5
CCDC93-205ENST00000466171 A0A1W2PRU2 124 aa5.66□□□□□ -1.5
CCDC93-205ENST00000466171 ERVK-9P63128 1117 aa5.66□□□□□ -1.5
CCDC93-205ENST00000466171 IL27Q8NEV9 243 aa5.66□□□□□ -1.5
CCDC93-205ENST00000466171 ZNF837Q96EG3 531 aaPredicted RBP5.66□□□□□ -1.5
CCDC93-205ENST00000466171 NSFL1CQ9UNZ2 370 aaKnown RBP5.66□□□□□ -1.5
CCDC93-205ENST00000466171 DYRK1BQ9Y463 629 aa5.66□□□□□ -1.5
CCDC93-205ENST00000466171 CNTNAP5Q8WYK1 1306 aa5.66□□□□□ -1.5
CCDC93-205ENST00000466171 PHF20L1A8MW92 1017 aa5.65□□□□□ -1.5
CCDC93-205ENST00000466171 CELA2BP08218 269 aaPredicted RBP5.65□□□□□ -1.5
CCDC93-205ENST00000466171 BAG6P46379 1132 aa5.65□□□□□ -1.5
CCDC93-205ENST00000466171 BANK1Q8NDB2 785 aa5.65□□□□□ -1.5
CCDC93-205ENST00000466171 GJD4Q96KN9 370 aaPredicted RBP5.65□□□□□ -1.5
CCDC93-205ENST00000466171 GAS2L1Q99501 681 aaPredicted RBP5.65□□□□□ -1.5
CCDC93-205ENST00000466171 CUEDC1Q9NWM3 386 aaPredicted RBP5.65□□□□□ -1.5
CCDC93-205ENST00000466171 PCDHB11Q9Y5F2 797 aa5.65□□□□□ -1.5
CCDC93-205ENST00000466171 GTF2E1P29083 439 aaPredicted RBP5.64□□□□□ -1.51
CCDC93-205ENST00000466171 POU4F2Q12837 409 aa5.64□□□□□ -1.51
CCDC93-205ENST00000466171 CLN3Q13286 438 aa5.64□□□□□ -1.51
CCDC93-205ENST00000466171 WDR44Q5JSH3 913 aa5.64□□□□□ -1.51
CCDC93-205ENST00000466171 PODNQ7Z5L7 613 aa5.64□□□□□ -1.51
CCDC93-205ENST00000466171 NEDD1Q8NHV4 660 aa5.64□□□□□ -1.51
CCDC93-205ENST00000466171 NDUFB9Q9Y6M9 179 aa5.64□□□□□ -1.51
CCDC93-205ENST00000466171 SOCS7O14512 581 aa5.63□□□□□ -1.51
CCDC93-205ENST00000466171 MYCP01106 439 aaPredicted RBP5.63□□□□□ -1.51
CCDC93-205ENST00000466171 GAS6Q14393 721 aa5.63□□□□□ -1.51
CCDC93-205ENST00000466171 TAS1R3Q7RTX0 852 aa5.63□□□□□ -1.51
CCDC93-205ENST00000466171 GTPBP3Q969Y2 492 aaKnown RBP5.63□□□□□ -1.51
CCDC93-205ENST00000466171 GRIP2Q9C0E4 1043 aa5.63□□□□□ -1.51
CCDC93-205ENST00000466171 PRM3Q9NNZ6 103 aa5.63□□□□□ -1.51
CCDC93-205ENST00000466171 TIMMDC1Q9NPL8 285 aa5.63□□□□□ -1.51
CCDC93-205ENST00000466171 IGF1RP08069 1367 aa5.63□□□□□ -1.51
CCDC93-205ENST00000466171 BTBD11A6QL63 1104 aa5.62□□□□□ -1.51
CCDC93-205ENST00000466171 SPATA31C2B4DYI2 1134 aa5.62□□□□□ -1.51
CCDC93-205ENST00000466171 GPR25O00155 361 aa5.62□□□□□ -1.51
CCDC93-205ENST00000466171 FURINP09958 794 aa5.62□□□□□ -1.51
CCDC93-205ENST00000466171 DBN1Q16643 649 aa5.62□□□□□ -1.51
CCDC93-205ENST00000466171 NBPF10Q6P3W6 841 aaKnown RBP5.62□□□□□ -1.51
CCDC93-205ENST00000466171 NBPF15Q8N660 670 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms