RNA–Protein interactions for RNA: ENST00000465819.1

CSMD2-207, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 5

Gene CSMD2, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-207ENST00000465819 LTV1Q96GA3 475 aaPredicted RBP15.84■□□□□ 0.13
CSMD2-207ENST00000465819 NSD2O96028 1365 aa15.84■□□□□ 0.13
CSMD2-207ENST00000465819 IFFO2Q5TF58 517 aa15.83■□□□□ 0.12
CSMD2-207ENST00000465819 SLC12A5Q9H2X9 1139 aa15.83■□□□□ 0.12
CSMD2-207ENST00000465819 A0A1W2PP64 1363 aa15.83■□□□□ 0.12
CSMD2-207ENST00000465819 RGPD2P0DJD1 1756 aa15.82■□□□□ 0.12
CSMD2-207ENST00000465819 GRIN3BO60391 1043 aa15.82■□□□□ 0.12
CSMD2-207ENST00000465819 YBX3P16989 372 aaKnown RBP eCLIP15.82■□□□□ 0.12
CSMD2-207ENST00000465819 TERF2IPQ9NYB0 399 aa15.81■□□□□ 0.12
CSMD2-207ENST00000465819 CCNL1Q9UK58 526 aaPredicted RBP15.81■□□□□ 0.12
CSMD2-207ENST00000465819 MEGF6O75095 1541 aa15.79■□□□□ 0.12
CSMD2-207ENST00000465819 MSH5O43196 834 aa15.79■□□□□ 0.12
CSMD2-207ENST00000465819 COL23A1Q86Y22 540 aaPredicted RBP15.79■□□□□ 0.12
CSMD2-207ENST00000465819 ZCRB1Q8TBF4 217 aaKnown RBP15.79■□□□□ 0.12
CSMD2-207ENST00000465819 CARD11Q9BXL7 1154 aa15.79■□□□□ 0.12
CSMD2-207ENST00000465819 USP47Q96K76 1375 aa15.78■□□□□ 0.12
CSMD2-207ENST00000465819 C5P01031 1676 aa15.78■□□□□ 0.12
CSMD2-207ENST00000465819 GOLGB1Q14789 3259 aaKnown RBP15.78■□□□□ 0.12
CSMD2-207ENST00000465819 ATP10DQ9P241 1426 aa15.77■□□□□ 0.12
CSMD2-207ENST00000465819 MAP3K19Q56UN5 1328 aa15.77■□□□□ 0.12
CSMD2-207ENST00000465819 HOXC9P31274 260 aa15.77■□□□□ 0.12
CSMD2-207ENST00000465819 AMPHP49418 695 aa15.76■□□□□ 0.11
CSMD2-207ENST00000465819 MSL1Q68DK7 614 aa15.76■□□□□ 0.11
CSMD2-207ENST00000465819 COG3Q96JB2 828 aa15.76■□□□□ 0.11
CSMD2-207ENST00000465819 PUS7Q96PZ0 661 aaKnown RBP15.75■□□□□ 0.11
CSMD2-207ENST00000465819 TAF1LQ8IZX4 1826 aa15.75■□□□□ 0.11
CSMD2-207ENST00000465819 RTL1A6NKG5 1358 aa15.74■□□□□ 0.11
CSMD2-207ENST00000465819 FBLN1P23142 703 aa15.73■□□□□ 0.11
CSMD2-207ENST00000465819 CD2APQ9Y5K6 639 aa15.73■□□□□ 0.11
CSMD2-207ENST00000465819 CGNL1Q0VF96 1302 aa15.72■□□□□ 0.11
CSMD2-207ENST00000465819 GPBP1L1Q9HC44 474 aaPredicted RBP15.72■□□□□ 0.11
CSMD2-207ENST00000465819 ADCY9O60503 1353 aa15.72■□□□□ 0.11
CSMD2-207ENST00000465819 NBPF6Q5VWK0 638 aa15.71■□□□□ 0.11
CSMD2-207ENST00000465819 FLAD1Q8NFF5 587 aa15.71■□□□□ 0.11
CSMD2-207ENST00000465819 NBPF4Q96M43 638 aa15.71■□□□□ 0.11
CSMD2-207ENST00000465819 HMGB2P26583 209 aaKnown RBP15.7■□□□□ 0.1
CSMD2-207ENST00000465819 USHBP1Q8N6Y0 703 aa15.7■□□□□ 0.1
CSMD2-207ENST00000465819 RAPGEF4Q8WZA2 1011 aa15.7■□□□□ 0.1
CSMD2-207ENST00000465819 C4BP0C0L5 1744 aa15.7■□□□□ 0.1
CSMD2-207ENST00000465819 PALLDQ8WX93 1383 aa15.7■□□□□ 0.1
CSMD2-207ENST00000465819 SMG6Q86US8 1419 aaKnown RBP15.69■□□□□ 0.1
CSMD2-207ENST00000465819 RRS1Q15050 365 aaKnown RBP15.69■□□□□ 0.1
CSMD2-207ENST00000465819 PCDH11XQ9BZA7 1347 aa15.68■□□□□ 0.1
CSMD2-207ENST00000465819 PCDH11YQ9BZA8 1340 aa15.68■□□□□ 0.1
CSMD2-207ENST00000465819 TOGARAM1Q9Y4F4 1720 aa15.68■□□□□ 0.1
CSMD2-207ENST00000465819 ITGB4P16144 1822 aa15.68■□□□□ 0.1
CSMD2-207ENST00000465819 HSPA6P17066 643 aa15.68■□□□□ 0.1
CSMD2-207ENST00000465819 TATP17735 454 aaPredicted RBP15.68■□□□□ 0.1
CSMD2-207ENST00000465819 ZNF526Q8TF50 670 aaPredicted RBP15.68■□□□□ 0.1
CSMD2-207ENST00000465819 UBR3Q6ZT12 1888 aa15.67■□□□□ 0.1
CSMD2-207ENST00000465819 CEP350Q5VT06 3117 aa15.67■□□□□ 0.1
CSMD2-207ENST00000465819 MPRIPQ6WCQ1 1025 aa15.67■□□□□ 0.1
CSMD2-207ENST00000465819 AK7Q96M32 723 aa15.66■□□□□ 0.1
CSMD2-207ENST00000465819 TESK2Q96S53 571 aa15.66■□□□□ 0.1
CSMD2-207ENST00000465819 IGSF1Q8N6C5 1336 aa15.66■□□□□ 0.1
CSMD2-207ENST00000465819 TONSLQ96HA7 1378 aa15.64■□□□□ 0.09
CSMD2-207ENST00000465819 PKD1L3Q7Z443 1732 aa15.64■□□□□ 0.09
CSMD2-207ENST00000465819 AMIGO3Q86WK7 504 aa15.64■□□□□ 0.09
CSMD2-207ENST00000465819 SMARCC1Q92922 1105 aaPredicted RBP15.64■□□□□ 0.09
CSMD2-207ENST00000465819 NSD3Q9BZ95 1437 aa15.64■□□□□ 0.09
CSMD2-207ENST00000465819 KIF20BQ96Q89 1820 aa15.64■□□□□ 0.09
CSMD2-207ENST00000465819 INSRP06213 1382 aa15.63■□□□□ 0.09
CSMD2-207ENST00000465819 ST20-MTHFSA0A0A6YYL1 179 aa15.63■□□□□ 0.09
CSMD2-207ENST00000465819 FYB1O15117 783 aa15.63■□□□□ 0.09
CSMD2-207ENST00000465819 PHF14O94880 888 aa15.63■□□□□ 0.09
CSMD2-207ENST00000465819 GGNBP2Q9H3C7 697 aa15.63■□□□□ 0.09
CSMD2-207ENST00000465819 WWC3Q9ULE0 1092 aa15.63■□□□□ 0.09
CSMD2-207ENST00000465819 MAP2P11137 1827 aaKnown RBP15.62■□□□□ 0.09
CSMD2-207ENST00000465819 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.62■□□□□ 0.09
CSMD2-207ENST00000465819 CYP27B1O15528 508 aa15.62■□□□□ 0.09
CSMD2-207ENST00000465819 SLC24A1O60721 1099 aa15.62■□□□□ 0.09
CSMD2-207ENST00000465819 HSP90AB2PQ58FF8 381 aa15.62■□□□□ 0.09
CSMD2-207ENST00000465819 FLT4P35916 1363 aa15.62■□□□□ 0.09
CSMD2-207ENST00000465819 KIF24Q5T7B8 1368 aa15.62■□□□□ 0.09
CSMD2-207ENST00000465819 CICQ96RK0 1608 aaPredicted RBP15.61■□□□□ 0.09
CSMD2-207ENST00000465819 SSFA2P28290 1259 aa15.6■□□□□ 0.09
CSMD2-207ENST00000465819 SMIM5Q71RC9 77 aa15.6■□□□□ 0.09
CSMD2-207ENST00000465819 KIF3CO14782 793 aa15.59■□□□□ 0.09
CSMD2-207ENST00000465819 PIGBQ92521 554 aa15.59■□□□□ 0.09
CSMD2-207ENST00000465819 LOC102724428A0A0B4J2F2 783 aa15.58■□□□□ 0.08
CSMD2-207ENST00000465819 SIK1P57059 783 aa15.58■□□□□ 0.08
CSMD2-207ENST00000465819 LINC00116Q8NCU8 138 aa15.58■□□□□ 0.08
CSMD2-207ENST00000465819 KIF13BQ9NQT8 1826 aa15.57■□□□□ 0.08
CSMD2-207ENST00000465819 NCAPD2Q15021 1401 aa15.57■□□□□ 0.08
CSMD2-207ENST00000465819 KIAA1551Q9HCM1 1747 aa15.57■□□□□ 0.08
CSMD2-207ENST00000465819 GNPATO15228 680 aa15.56■□□□□ 0.08
CSMD2-207ENST00000465819 NKX1-1Q15270 411 aaPredicted RBP15.56■□□□□ 0.08
CSMD2-207ENST00000465819 N4BP2Q86UW6 1770 aaPredicted RBP15.55■□□□□ 0.08
CSMD2-207ENST00000465819 PXDNLA1KZ92 1463 aa15.55■□□□□ 0.08
CSMD2-207ENST00000465819 TMF1P82094 1093 aa15.55■□□□□ 0.08
CSMD2-207ENST00000465819 SPG7Q9UQ90 795 aa15.55■□□□□ 0.08
CSMD2-207ENST00000465819 ANKRD26Q9UPS8 1709 aa15.54■□□□□ 0.08
CSMD2-207ENST00000465819 APLP1P51693 650 aa15.54■□□□□ 0.08
CSMD2-207ENST00000465819 ITPK1Q13572 414 aa15.54■□□□□ 0.08
CSMD2-207ENST00000465819 TMOD3Q9NYL9 352 aa15.54■□□□□ 0.08
CSMD2-207ENST00000465819 EMILIN1Q9Y6C2 1016 aa15.54■□□□□ 0.08
CSMD2-207ENST00000465819 MMP10P09238 476 aa15.53■□□□□ 0.08
CSMD2-207ENST00000465819 ATP6V1AP38606 617 aa15.53■□□□□ 0.08
CSMD2-207ENST00000465819 TOMM70O94826 608 aa15.52■□□□□ 0.08
CSMD2-207ENST00000465819 PCGF6Q9BYE7 350 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms