RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 FHDC1Q9C0D6 1143 aaPredicted RBP11.87□□□□□ -0.51
UBA3-208ENST00000465627 PDGFDQ9GZP0 370 aaPredicted RBP11.87□□□□□ -0.51
UBA3-208ENST00000465627 CCDC9Q9Y3X0 531 aaKnown RBP11.87□□□□□ -0.51
UBA3-208ENST00000465627 VPS72Q15906 364 aa11.86□□□□□ -0.51
UBA3-208ENST00000465627 DNAJC5GQ8N7S2 189 aa11.86□□□□□ -0.51
UBA3-208ENST00000465627 NGDNQ8NEJ9 315 aaKnown RBP11.86□□□□□ -0.51
UBA3-208ENST00000465627 OTUD5Q96G74 571 aa11.86□□□□□ -0.51
UBA3-208ENST00000465627 PCNTO95613 3336 aa11.86□□□□□ -0.51
UBA3-208ENST00000465627 PLCH1Q4KWH8 1693 aa11.86□□□□□ -0.51
UBA3-208ENST00000465627 PXDNQ92626 1479 aa11.85□□□□□ -0.51
UBA3-208ENST00000465627 FAM83GA6ND36 823 aa11.85□□□□□ -0.51
UBA3-208ENST00000465627 POTEB2H3BUK9 544 aa11.85□□□□□ -0.51
UBA3-208ENST00000465627 ATMINO43313 823 aaPredicted RBP11.85□□□□□ -0.51
UBA3-208ENST00000465627 TRIM37O94972 964 aa11.85□□□□□ -0.51
UBA3-208ENST00000465627 MTHFSP49914 203 aa11.85□□□□□ -0.51
UBA3-208ENST00000465627 ESCO1Q5FWF5 840 aa11.85□□□□□ -0.51
UBA3-208ENST00000465627 SLC39A7Q92504 469 aa11.85□□□□□ -0.51
UBA3-208ENST00000465627 PEAK1Q9H792 1746 aa11.85□□□□□ -0.51
UBA3-208ENST00000465627 APBA3O96018 575 aa11.84□□□□□ -0.51
UBA3-208ENST00000465627 PTGER2P43116 358 aa11.84□□□□□ -0.51
UBA3-208ENST00000465627 NBPF14Q5TI25 921 aa11.84□□□□□ -0.51
UBA3-208ENST00000465627 YTHDC1Q96MU7 727 aaKnown RBP11.84□□□□□ -0.51
UBA3-208ENST00000465627 POLKQ9UBT6 870 aa11.84□□□□□ -0.51
UBA3-208ENST00000465627 METRNQ9UJH8 293 aa11.84□□□□□ -0.51
UBA3-208ENST00000465627 SLIT3O75094 1523 aa11.84□□□□□ -0.51
UBA3-208ENST00000465627 PHRF1Q9P1Y6 1649 aaKnown RBP11.84□□□□□ -0.51
UBA3-208ENST00000465627 FAM98CQ17RN3 349 aaKnown RBP11.83□□□□□ -0.52
UBA3-208ENST00000465627 FAM9BQ8IZU0 186 aa11.83□□□□□ -0.52
UBA3-208ENST00000465627 NFAT5O94916 1531 aa11.83□□□□□ -0.52
UBA3-208ENST00000465627 CRYBG1Q9Y4K1 1723 aa11.83□□□□□ -0.52
UBA3-208ENST00000465627 ZBTB7AO95365 584 aa11.82□□□□□ -0.52
UBA3-208ENST00000465627 C7P10643 843 aa11.82□□□□□ -0.52
UBA3-208ENST00000465627 FBLN1P23142 703 aa11.82□□□□□ -0.52
UBA3-208ENST00000465627 TNNT2P45379 298 aaPredicted RBP11.82□□□□□ -0.52
UBA3-208ENST00000465627 COG3Q96JB2 828 aa11.82□□□□□ -0.52
UBA3-208ENST00000465627 SBNO1A3KN83 1393 aa11.81□□□□□ -0.52
UBA3-208ENST00000465627 FOXO3O43524 673 aa11.81□□□□□ -0.52
UBA3-208ENST00000465627 ADAMTS8Q9UP79 889 aa11.81□□□□□ -0.52
UBA3-208ENST00000465627 NWD2Q9ULI1 1742 aa11.81□□□□□ -0.52
UBA3-208ENST00000465627 USP19O94966 1318 aa11.8□□□□□ -0.52
UBA3-208ENST00000465627 PLCD3Q8N3E9 789 aa11.8□□□□□ -0.52
UBA3-208ENST00000465627 KIF12Q96FN5 646 aa11.8□□□□□ -0.52
UBA3-208ENST00000465627 XPCQ01831 940 aaPredicted RBP11.79□□□□□ -0.52
UBA3-208ENST00000465627 EMILIN1Q9Y6C2 1016 aa11.79□□□□□ -0.52
UBA3-208ENST00000465627 ZBED9Q6R2W3 1325 aa11.79□□□□□ -0.52
UBA3-208ENST00000465627 PSME1Q06323 249 aa11.79□□□□□ -0.52
UBA3-208ENST00000465627 KRT28Q7Z3Y7 464 aa11.79□□□□□ -0.52
UBA3-208ENST00000465627 KIF24Q5T7B8 1368 aa11.78□□□□□ -0.52
UBA3-208ENST00000465627 NPHP3Q7Z494 1330 aa11.78□□□□□ -0.52
UBA3-208ENST00000465627 HNRNPUQ00839 825 aaKnown RBP eCLIP11.78□□□□□ -0.52
UBA3-208ENST00000465627 GPR162Q16538 588 aa11.78□□□□□ -0.52
UBA3-208ENST00000465627 RASEFQ8IZ41 740 aa11.78□□□□□ -0.52
UBA3-208ENST00000465627 WWC3Q9ULE0 1092 aa11.78□□□□□ -0.52
UBA3-208ENST00000465627 LTN1O94822 1766 aa11.78□□□□□ -0.52
UBA3-208ENST00000465627 ATP10DQ9P241 1426 aa11.77□□□□□ -0.52
UBA3-208ENST00000465627 MAP3K19Q56UN5 1328 aa11.77□□□□□ -0.53
UBA3-208ENST00000465627 NLRP6P59044 892 aa11.77□□□□□ -0.53
UBA3-208ENST00000465627 RRS1Q15050 365 aaKnown RBP11.77□□□□□ -0.53
UBA3-208ENST00000465627 ABTB2Q8N961 1025 aa11.77□□□□□ -0.53
UBA3-208ENST00000465627 ZBTB47Q9UFB7 747 aaPredicted RBP11.77□□□□□ -0.53
UBA3-208ENST00000465627 TNS3Q68CZ2 1445 aa11.76□□□□□ -0.53
UBA3-208ENST00000465627 SPATA31A3Q5VYP0 1347 aa11.76□□□□□ -0.53
UBA3-208ENST00000465627 IL13P35225 146 aa11.76□□□□□ -0.53
UBA3-208ENST00000465627 CFAP53Q96M91 514 aa11.76□□□□□ -0.53
UBA3-208ENST00000465627 ANO8Q9HCE9 1232 aaPredicted RBP11.76□□□□□ -0.53
UBA3-208ENST00000465627 NRAPQ86VF7 1730 aa11.75□□□□□ -0.53
UBA3-208ENST00000465627 ATN1P54259 1190 aaPredicted RBP11.75□□□□□ -0.53
UBA3-208ENST00000465627 ABCA3Q99758 1704 aa11.75□□□□□ -0.53
UBA3-208ENST00000465627 THSD7AQ9UPZ6 1657 aa11.75□□□□□ -0.53
UBA3-208ENST00000465627 COL18A1P39060 1754 aa11.74□□□□□ -0.53
UBA3-208ENST00000465627 TNS2Q63HR2 1409 aa11.74□□□□□ -0.53
UBA3-208ENST00000465627 MAP3K13O43283 966 aa11.74□□□□□ -0.53
UBA3-208ENST00000465627 WDR43Q15061 677 aaKnown RBP eCLIP11.74□□□□□ -0.53
UBA3-208ENST00000465627 RTL1A6NKG5 1358 aa11.74□□□□□ -0.53
UBA3-208ENST00000465627 FLT4P35916 1363 aa11.74□□□□□ -0.53
UBA3-208ENST00000465627 ZNF521Q96K83 1311 aa11.73□□□□□ -0.53
UBA3-208ENST00000465627 DIAPH1O60610 1272 aaKnown RBP11.73□□□□□ -0.53
UBA3-208ENST00000465627 CENPBP07199 599 aaPredicted RBP11.73□□□□□ -0.53
UBA3-208ENST00000465627 APLP1P51693 650 aa11.73□□□□□ -0.53
UBA3-208ENST00000465627 NUTM2GQ5VZR2 741 aa11.73□□□□□ -0.53
UBA3-208ENST00000465627 MAMSTRQ6ZN01 415 aa11.73□□□□□ -0.53
UBA3-208ENST00000465627 ZNF526Q8TF50 670 aaPredicted RBP11.73□□□□□ -0.53
UBA3-208ENST00000465627 PLEKHF1Q96S99 279 aa11.73□□□□□ -0.53
UBA3-208ENST00000465627 ABCC6O95255 1503 aa11.72□□□□□ -0.53
UBA3-208ENST00000465627 GPBP1L1Q9HC44 474 aaPredicted RBP11.72□□□□□ -0.53
UBA3-208ENST00000465627 WDR90Q96KV7 1748 aa11.72□□□□□ -0.53
UBA3-208ENST00000465627 GCP02774 474 aa11.71□□□□□ -0.53
UBA3-208ENST00000465627 TIE1P35590 1138 aa11.71□□□□□ -0.53
UBA3-208ENST00000465627 EIF4A2Q14240 407 aaKnown RBP11.71□□□□□ -0.53
UBA3-208ENST00000465627 HSP90AB2PQ58FF8 381 aa11.71□□□□□ -0.53
UBA3-208ENST00000465627 ARHGEF25Q86VW2 580 aa11.71□□□□□ -0.53
UBA3-208ENST00000465627 KCNH5Q8NCM2 988 aa11.71□□□□□ -0.53
UBA3-208ENST00000465627 BMP2KQ9NSY1 1161 aaPredicted RBP11.71□□□□□ -0.53
UBA3-208ENST00000465627 ARHGEF10O15013 1369 aa11.71□□□□□ -0.53
UBA3-208ENST00000465627 NCAPD2Q15021 1401 aa11.71□□□□□ -0.54
UBA3-208ENST00000465627 LMO7Q8WWI1 1683 aa11.7□□□□□ -0.54
UBA3-208ENST00000465627 HOXC9P31274 260 aa11.7□□□□□ -0.54
UBA3-208ENST00000465627 RSPH6AQ9H0K4 717 aa11.7□□□□□ -0.54
UBA3-208ENST00000465627 CPDO75976 1380 aa11.69□□□□□ -0.54
UBA3-208ENST00000465627 KDRP35968 1356 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms