RNA–Protein interactions for RNA: ENST00000465125.1

RERE-208, Transcript of arginine-glutamic acid dipeptide repeats, human

TSL 5

Gene RERE, Length 396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RERE-208	ENST00000465125	RGS12	O14924	1447 aa		32.58	■■■□□ 2.81
RERE-208	ENST00000465125	SEPT12	Q8IYM1	358 aa		32.57	■■■□□ 2.8
RERE-208	ENST00000465125	RSPH6A	Q9H0K4	717 aa		32.56	■■■□□ 2.8
RERE-208	ENST00000465125	PLEKHG2	Q9H7P9	1386 aa		32.56	■■■□□ 2.8
RERE-208	ENST00000465125	TNS2	Q63HR2	1409 aa		32.55	■■■□□ 2.8
RERE-208	ENST00000465125	FCHSD2	O94868	740 aa		32.55	■■■□□ 2.8
RERE-208	ENST00000465125	DDB1	Q16531	1140 aa		32.54	■■■□□ 2.8
RERE-208	ENST00000465125	PRKAR2B	P31323	418 aa		32.53	■■■□□ 2.8
RERE-208	ENST00000465125	PKD1L3	Q7Z443	1732 aa		32.53	■■■□□ 2.8
RERE-208	ENST00000465125	PNISR	Q8TF01	805 aa	Known RBP	32.52	■■■□□ 2.8
RERE-208	ENST00000465125	EXOC5	O00471	708 aa		32.51	■■■□□ 2.79
RERE-208	ENST00000465125	ADAMTS8	Q9UP79	889 aa		32.51	■■■□□ 2.79
RERE-208	ENST00000465125	ZCRB1	Q8TBF4	217 aa	Known RBP	32.5	■■■□□ 2.79
RERE-208	ENST00000465125	PNN	Q9H307	717 aa	Known RBP	32.5	■■■□□ 2.79
RERE-208	ENST00000465125	SPG7	Q9UQ90	795 aa		32.49	■■■□□ 2.79
RERE-208	ENST00000465125	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.48	■■■□□ 2.79
RERE-208	ENST00000465125	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.48	■■■□□ 2.79
RERE-208	ENST00000465125	BRWD3	Q6RI45	1802 aa		32.48	■■■□□ 2.79
RERE-208	ENST00000465125	AMOT	Q4VCS5	1084 aa		32.47	■■■□□ 2.79
RERE-208	ENST00000465125	SHANK3	Q9BYB0	1731 aa		32.47	■■■□□ 2.79
RERE-208	ENST00000465125	NEFM	P07197	916 aa		32.46	■■■□□ 2.79
RERE-208	ENST00000465125	PDE3B	Q13370	1112 aa		32.46	■■■□□ 2.79
RERE-208	ENST00000465125	PCDH11X	Q9BZA7	1347 aa		32.45	■■■□□ 2.78
RERE-208	ENST00000465125	PCDH11Y	Q9BZA8	1340 aa		32.45	■■■□□ 2.78
RERE-208	ENST00000465125	FAM9B	Q8IZU0	186 aa		32.44	■■■□□ 2.78
RERE-208	ENST00000465125	MAPK8IP3	Q9UPT6	1336 aa		32.44	■■■□□ 2.78
RERE-208	ENST00000465125	KRT27	Q7Z3Y8	459 aa		32.43	■■■□□ 2.78
RERE-208	ENST00000465125	PLEKHF1	Q96S99	279 aa		32.42	■■■□□ 2.78
RERE-208	ENST00000465125	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.41	■■■□□ 2.78
RERE-208	ENST00000465125	CCDC146	Q8IYE0	955 aa		32.41	■■■□□ 2.78
RERE-208	ENST00000465125	DDX54	Q8TDD1	881 aa	Known RBP	32.41	■■■□□ 2.78
RERE-208	ENST00000465125	PHACTR3	Q96KR7	559 aa		32.41	■■■□□ 2.78
RERE-208	ENST00000465125	GAS2L2	Q8NHY3	880 aa		32.39	■■■□□ 2.78
RERE-208	ENST00000465125	RUNDC1	Q96C34	613 aa		32.39	■■■□□ 2.78
RERE-208	ENST00000465125	MTHFSD	Q2M296	383 aa	Known RBP	32.38	■■■□□ 2.77
RERE-208	ENST00000465125	MARCH10	Q8NA82	808 aa	Predicted RBP	32.38	■■■□□ 2.77
RERE-208	ENST00000465125	C1orf141	Q5JVX7	400 aa		32.37	■■■□□ 2.77
RERE-208	ENST00000465125	CYP27B1	O15528	508 aa		32.36	■■■□□ 2.77
RERE-208	ENST00000465125	IFNL2	Q8IZJ0	200 aa		32.36	■■■□□ 2.77
RERE-208	ENST00000465125	PHKG2	P15735	406 aa		32.34	■■■□□ 2.77
RERE-208	ENST00000465125	AKAP4	Q5JQC9	854 aa		32.32	■■■□□ 2.76
RERE-208	ENST00000465125	FAM182B	Q5T319	152 aa		32.32	■■■□□ 2.76
RERE-208	ENST00000465125	NFE2L2	Q16236	605 aa		32.3	■■■□□ 2.76
RERE-208	ENST00000465125	MAP3K5	Q99683	1374 aa		32.3	■■■□□ 2.76
RERE-208	ENST00000465125	HSP90AB1	P08238	724 aa	Known RBP	32.29	■■■□□ 2.76
RERE-208	ENST00000465125	NKX1-1	Q15270	411 aa	Predicted RBP	32.27	■■■□□ 2.76
RERE-208	ENST00000465125	FAM196A	Q6ZSG2	479 aa		32.27	■■■□□ 2.76
RERE-208	ENST00000465125	BCL9	O00512	1426 aa		32.26	■■■□□ 2.76
RERE-208	ENST00000465125	GNAT3	A8MTJ3	354 aa		32.26	■■■□□ 2.75
RERE-208	ENST00000465125	TMPO	P42166	694 aa	Known RBP	32.25	■■■□□ 2.75
RERE-208	ENST00000465125	DOT1L	Q8TEK3	1739 aa		32.25	■■■□□ 2.75
RERE-208	ENST00000465125	DLG5	Q8TDM6	1919 aa		32.24	■■■□□ 2.75
RERE-208	ENST00000465125	APAF1	O14727	1248 aa		32.24	■■■□□ 2.75
RERE-208	ENST00000465125	DCAF5	Q96JK2	942 aa		32.24	■■■□□ 2.75
RERE-208	ENST00000465125	RRP7A	Q9Y3A4	280 aa	Known RBP	32.23	■■■□□ 2.75
RERE-208	ENST00000465125	KDM6A	O15550	1401 aa	Predicted RBP	32.23	■■■□□ 2.75
RERE-208	ENST00000465125	RIPK4	P57078	832 aa		32.22	■■■□□ 2.75
RERE-208	ENST00000465125	MPRIP	Q6WCQ1	1025 aa		32.22	■■■□□ 2.75
RERE-208	ENST00000465125	TOGARAM1	Q9Y4F4	1720 aa		32.22	■■■□□ 2.75
RERE-208	ENST00000465125	NEUROD2	Q15784	382 aa		32.21	■■■□□ 2.75
RERE-208	ENST00000465125	ILDR2	Q71H61	639 aa		32.21	■■■□□ 2.75
RERE-208	ENST00000465125	RTF1	Q92541	710 aa	Known RBP	32.21	■■■□□ 2.75
RERE-208	ENST00000465125	SCN11A	Q9UI33	1791 aa		32.2	■■■□□ 2.75
RERE-208	ENST00000465125	ADAMTS7	Q9UKP4	1686 aa		32.2	■■■□□ 2.74
RERE-208	ENST00000465125	HTATSF1	O43719	755 aa	Known RBP	32.19	■■■□□ 2.74
RERE-208	ENST00000465125	LMOD3	Q0VAK6	560 aa		32.19	■■■□□ 2.74
RERE-208	ENST00000465125	ACSBG1	Q96GR2	724 aa		32.19	■■■□□ 2.74
RERE-208	ENST00000465125	VIRMA	Q69YN4	1812 aa	Known RBP	32.19	■■■□□ 2.74
RERE-208	ENST00000465125	SBF2	Q86WG5	1849 aa		32.19	■■■□□ 2.74
RERE-208	ENST00000465125	NHS	Q6T4R5	1651 aa		32.18	■■■□□ 2.74
RERE-208	ENST00000465125	RNMT	O43148	476 aa	Known RBP	32.18	■■■□□ 2.74
RERE-208	ENST00000465125	ERVV-2	B6SEH9	535 aa		32.15	■■■□□ 2.74
RERE-208	ENST00000465125	SYTL4	Q96C24	671 aa	Predicted RBP	32.15	■■■□□ 2.74
RERE-208	ENST00000465125	LGR6	Q9HBX8	967 aa		32.15	■■■□□ 2.74
RERE-208	ENST00000465125	SENP3-EIF4A1	A0A087X0R7	540 aa		32.14	■■■□□ 2.74
RERE-208	ENST00000465125	MCM10	Q7L590	875 aa		32.14	■■■□□ 2.74
RERE-208	ENST00000465125	EP400	Q96L91	3159 aa		32.13	■■■□□ 2.73
RERE-208	ENST00000465125	MRC1	P22897	1456 aa		32.13	■■■□□ 2.73
RERE-208	ENST00000465125	PRIM1	P49642	420 aa	Known RBP	32.13	■■■□□ 2.73
RERE-208	ENST00000465125	IL17RE	Q8NFR9	667 aa		32.13	■■■□□ 2.73
RERE-208	ENST00000465125	KAT6B	Q8WYB5	2073 aa		32.13	■■■□□ 2.73
RERE-208	ENST00000465125	ITGB4	P16144	1822 aa		32.12	■■■□□ 2.73
RERE-208	ENST00000465125	CEMIP	Q8WUJ3	1361 aa		32.12	■■■□□ 2.73
RERE-208	ENST00000465125	DCTN1	Q14203	1278 aa		32.12	■■■□□ 2.73
RERE-208	ENST00000465125	TRIM37	O94972	964 aa		32.11	■■■□□ 2.73
RERE-208	ENST00000465125	CABP4	P57796	275 aa		32.11	■■■□□ 2.73
RERE-208	ENST00000465125	TMOD3	Q9NYL9	352 aa		32.11	■■■□□ 2.73
RERE-208	ENST00000465125	KCNQ2	O43526	872 aa		32.1	■■■□□ 2.73
RERE-208	ENST00000465125	TEF	Q10587	303 aa		32.1	■■■□□ 2.73
RERE-208	ENST00000465125	TRIM35	Q9UPQ4	493 aa		32.1	■■■□□ 2.73
RERE-208	ENST00000465125	BCL11B	Q9C0K0	894 aa	Predicted RBP	32.09	■■■□□ 2.73
RERE-208	ENST00000465125	SLC52A2	Q9HAB3	445 aa		32.09	■■■□□ 2.73
RERE-208	ENST00000465125	NCBP3	Q53F19	620 aa	Known RBP	32.08	■■■□□ 2.73
RERE-208	ENST00000465125	NGEF	Q8N5V2	710 aa		32.07	■■■□□ 2.72
RERE-208	ENST00000465125	THUMPD2	Q9BTF0	503 aa	Known RBP	32.07	■■■□□ 2.72
RERE-208	ENST00000465125	SALL2	Q9Y467	1007 aa	Predicted RBP	32.06	■■■□□ 2.72
RERE-208	ENST00000465125	TNS1	Q9HBL0	1735 aa	Known RBP	32.06	■■■□□ 2.72
RERE-208	ENST00000465125	BTAF1	O14981	1849 aa		32.05	■■■□□ 2.72
RERE-208	ENST00000465125	CCDC27	Q2M243	656 aa		32.05	■■■□□ 2.72
RERE-208	ENST00000465125	PTF1A	Q7RTS3	328 aa		32.05	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms