RNA–Protein interactions for RNA: ENST00000465043.1

SCN3A-206, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-206ENST00000465043 LYSMD3Q7Z3D4 306 aa7.06□□□□□ -1.28
SCN3A-206ENST00000465043 GPR37L1O60883 481 aa7.05□□□□□ -1.28
SCN3A-206ENST00000465043 ITGA6P23229 1130 aa7.05□□□□□ -1.28
SCN3A-206ENST00000465043 SV2AQ7L0J3 742 aa7.04□□□□□ -1.28
SCN3A-206ENST00000465043 KDF1Q8NAX2 398 aaPredicted RBP7.04□□□□□ -1.28
SCN3A-206ENST00000465043 GMCL1Q96IK5 515 aa7.04□□□□□ -1.28
SCN3A-206ENST00000465043 NLRP3Q96P20 1036 aa7.04□□□□□ -1.28
SCN3A-206ENST00000465043 PCDHB11Q9Y5F2 797 aa7.04□□□□□ -1.28
SCN3A-206ENST00000465043 MYCP01106 439 aaPredicted RBP7.03□□□□□ -1.28
SCN3A-206ENST00000465043 FOXD4L5Q5VV16 416 aaPredicted RBP7.03□□□□□ -1.28
SCN3A-206ENST00000465043 A0A1W2PRU2 124 aa7.02□□□□□ -1.29
SCN3A-206ENST00000465043 MEN1O00255 615 aa7.02□□□□□ -1.29
SCN3A-206ENST00000465043 CLN3Q13286 438 aa7.02□□□□□ -1.29
SCN3A-206ENST00000465043 CEP126Q9P2H0 1117 aa7.02□□□□□ -1.29
SCN3A-206ENST00000465043 GNRH1P01148 92 aa7.01□□□□□ -1.29
SCN3A-206ENST00000465043 LORP23490 312 aaPredicted RBP7.01□□□□□ -1.29
SCN3A-206ENST00000465043 WASHC4Q2M389 1173 aa7.01□□□□□ -1.29
SCN3A-206ENST00000465043 WDR44Q5JSH3 913 aa7.01□□□□□ -1.29
SCN3A-206ENST00000465043 TBC1D2BQ9UPU7 963 aa7.01□□□□□ -1.29
SCN3A-206ENST00000465043 TRAK2O60296 914 aa7□□□□□ -1.29
SCN3A-206ENST00000465043 SLC27A3Q5K4L6 730 aa7□□□□□ -1.29
SCN3A-206ENST00000465043 FOXR1Q6PIV2 292 aa7□□□□□ -1.29
SCN3A-206ENST00000465043 SIRT1Q96EB6 747 aa7□□□□□ -1.29
SCN3A-206ENST00000465043 COL25A1Q9BXS0 654 aaPredicted RBP7□□□□□ -1.29
SCN3A-206ENST00000465043 SENP3-EIF4A1A0A087X0R7 540 aa6.99□□□□□ -1.29
SCN3A-206ENST00000465043 CDC14CA4D256 554 aa6.99□□□□□ -1.29
SCN3A-206ENST00000465043 SOX11P35716 441 aa6.99□□□□□ -1.29
SCN3A-206ENST00000465043 SLFNL1Q499Z3 407 aa6.99□□□□□ -1.29
SCN3A-206ENST00000465043 PRICKLE2Q7Z3G6 844 aa6.99□□□□□ -1.29
SCN3A-206ENST00000465043 VWA5B2Q8N398 1253 aa6.99□□□□□ -1.29
SCN3A-206ENST00000465043 DYRK1BQ9Y463 629 aa6.99□□□□□ -1.29
SCN3A-206ENST00000465043 H7C1W4 665 aa6.98□□□□□ -1.29
SCN3A-206ENST00000465043 GTF2E1P29083 439 aaPredicted RBP6.98□□□□□ -1.29
SCN3A-206ENST00000465043 SCTRP47872 440 aa6.98□□□□□ -1.29
SCN3A-206ENST00000465043 USP4Q13107 963 aa6.98□□□□□ -1.29
SCN3A-206ENST00000465043 ESCO1Q5FWF5 840 aa6.98□□□□□ -1.29
SCN3A-206ENST00000465043 WWC1Q8IX03 1113 aa6.98□□□□□ -1.29
SCN3A-206ENST00000465043 GPR161Q8N6U8 529 aaKnown RBP6.98□□□□□ -1.29
SCN3A-206ENST00000465043 CNTNAP3BQ96NU0 1288 aa6.98□□□□□ -1.29
SCN3A-206ENST00000465043 CNTNAP3Q9BZ76 1288 aa6.98□□□□□ -1.29
SCN3A-206ENST00000465043 OSBPL3Q9H4L5 887 aa6.98□□□□□ -1.29
SCN3A-206ENST00000465043 SPATA31C2B4DYI2 1134 aa6.97□□□□□ -1.29
SCN3A-206ENST00000465043 IRF5Q13568 498 aa6.97□□□□□ -1.29
SCN3A-206ENST00000465043 TRIM22Q8IYM9 498 aa6.97□□□□□ -1.29
SCN3A-206ENST00000465043 ESYT1Q9BSJ8 1104 aa6.97□□□□□ -1.29
SCN3A-206ENST00000465043 GRIP2Q9C0E4 1043 aa6.97□□□□□ -1.29
SCN3A-206ENST00000465043 DOLKQ9UPQ8 538 aa6.97□□□□□ -1.29
SCN3A-206ENST00000465043 SLURP2P0DP57 97 aa6.96□□□□□ -1.3
SCN3A-206ENST00000465043 MAP7D1Q3KQU3 841 aa6.96□□□□□ -1.3
SCN3A-206ENST00000465043 TAS1R3Q7RTX0 852 aa6.96□□□□□ -1.3
SCN3A-206ENST00000465043 RNF135Q8IUD6 432 aa6.96□□□□□ -1.3
SCN3A-206ENST00000465043 ARHGEF10LQ9HCE6 1279 aa6.96□□□□□ -1.3
SCN3A-206ENST00000465043 ABL2P42684 1182 aa6.95□□□□□ -1.3
SCN3A-206ENST00000465043 KRT76Q01546 638 aa6.95□□□□□ -1.3
SCN3A-206ENST00000465043 MCM6Q14566 821 aa6.95□□□□□ -1.3
SCN3A-206ENST00000465043 NBPF10Q6P3W6 841 aaKnown RBP6.95□□□□□ -1.3
SCN3A-206ENST00000465043 NBPF15Q8N660 670 aa6.95□□□□□ -1.3
SCN3A-206ENST00000465043 CNKSR1Q969H4 720 aa6.95□□□□□ -1.3
SCN3A-206ENST00000465043 CCDC85AQ96PX6 553 aaPredicted RBP6.95□□□□□ -1.3
SCN3A-206ENST00000465043 GDPD2Q9HCC8 539 aa6.95□□□□□ -1.3
SCN3A-206ENST00000465043 RNF225M0QZC1 329 aaPredicted RBP6.94□□□□□ -1.3
SCN3A-206ENST00000465043 RHOQP17081 205 aa6.94□□□□□ -1.3
SCN3A-206ENST00000465043 SEMA3FQ13275 785 aa6.94□□□□□ -1.3
SCN3A-206ENST00000465043 RIPOR1Q6ZS17 1223 aa6.94□□□□□ -1.3
SCN3A-206ENST00000465043 PHTF2Q8N3S3 785 aa6.94□□□□□ -1.3
SCN3A-206ENST00000465043 XAGE2Q96GT9 111 aa6.94□□□□□ -1.3
SCN3A-206ENST00000465043 TRERF1Q96PN7 1200 aa6.94□□□□□ -1.3
SCN3A-206ENST00000465043 CHIC2Q9UKJ5 165 aa6.94□□□□□ -1.3
SCN3A-206ENST00000465043 WASLO00401 505 aaPredicted RBP6.93□□□□□ -1.3
SCN3A-206ENST00000465043 SRSF11Q05519 484 aaKnown RBP6.93□□□□□ -1.3
SCN3A-206ENST00000465043 POU4F2Q12837 409 aa6.93□□□□□ -1.3
SCN3A-206ENST00000465043 GNASQ5JWF2 1037 aa6.93□□□□□ -1.3
SCN3A-206ENST00000465043 RNFT1Q5M7Z0 435 aa6.93□□□□□ -1.3
SCN3A-206ENST00000465043 ZNF837Q96EG3 531 aaPredicted RBP6.93□□□□□ -1.3
SCN3A-206ENST00000465043 TIMMDC1Q9NPL8 285 aa6.93□□□□□ -1.3
SCN3A-206ENST00000465043 F11P03951 625 aa6.92□□□□□ -1.3
SCN3A-206ENST00000465043 PRKCSHP14314 528 aaPredicted RBP6.92□□□□□ -1.3
SCN3A-206ENST00000465043 CENPCQ03188 943 aa6.92□□□□□ -1.3
SCN3A-206ENST00000465043 VAC14Q08AM6 782 aa6.92□□□□□ -1.3
SCN3A-206ENST00000465043 ZSCAN10Q96SZ4 725 aaPredicted RBP6.92□□□□□ -1.3
SCN3A-206ENST00000465043 CDCA7Q9BWT1 371 aaPredicted RBP6.92□□□□□ -1.3
SCN3A-206ENST00000465043 A0A1B0GTH6 734 aa6.91□□□□□ -1.3
SCN3A-206ENST00000465043 RAD21O60216 631 aa6.91□□□□□ -1.3
SCN3A-206ENST00000465043 IL2RAP01589 272 aa6.91□□□□□ -1.3
SCN3A-206ENST00000465043 FLIIQ13045 1269 aa6.91□□□□□ -1.3
SCN3A-206ENST00000465043 LBRQ14739 615 aaKnown RBP6.91□□□□□ -1.3
SCN3A-206ENST00000465043 SVOPQ8N4V2 548 aa6.91□□□□□ -1.3
SCN3A-206ENST00000465043 GAS2L1Q99501 681 aaPredicted RBP6.91□□□□□ -1.3
SCN3A-206ENST00000465043 MBIPQ9NS73 344 aa6.91□□□□□ -1.3
SCN3A-206ENST00000465043 CUEDC1Q9NWM3 386 aaPredicted RBP6.91□□□□□ -1.3
SCN3A-206ENST00000465043 NSFL1CQ9UNZ2 370 aaKnown RBP6.91□□□□□ -1.3
SCN3A-206ENST00000465043 LZTS3O60299 673 aaPredicted RBP6.9□□□□□ -1.3
SCN3A-206ENST00000465043 ADAMTS2O95450 1211 aa6.9□□□□□ -1.3
SCN3A-206ENST00000465043 MAP3K10Q02779 954 aa6.9□□□□□ -1.3
SCN3A-206ENST00000465043 TMEM214Q6NUQ4 689 aaKnown RBP6.9□□□□□ -1.3
SCN3A-206ENST00000465043 ENAMQ9NRM1 1142 aa6.9□□□□□ -1.3
SCN3A-206ENST00000465043 RAB6BQ9NRW1 208 aa6.9□□□□□ -1.3
SCN3A-206ENST00000465043 HRH3Q9Y5N1 445 aa6.9□□□□□ -1.3
SCN3A-206ENST00000465043 CCDC180Q9P1Z9 1646 aa6.9□□□□□ -1.31
SCN3A-206ENST00000465043 KCNMA1Q12791 1236 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms