RNA–Protein interactions for RNA: ENST00000464852.1

TNRC18-209, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 3

Gene TNRC18, Length 418 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-209ENST00000464852 SLIT3O75094 1523 aa14.4□□□□□ -0.1
TNRC18-209ENST00000464852 GPR162Q16538 588 aa14.39□□□□□ -0.11
TNRC18-209ENST00000464852 COL13A1Q5TAT6 717 aaPredicted RBP14.39□□□□□ -0.11
TNRC18-209ENST00000464852 IP6K1Q92551 441 aa14.39□□□□□ -0.11
TNRC18-209ENST00000464852 FLT4P35916 1363 aa14.38□□□□□ -0.11
TNRC18-209ENST00000464852 RGPD3A6NKT7 1758 aaPredicted RBP14.38□□□□□ -0.11
TNRC18-209ENST00000464852 RGPD4Q7Z3J3 1758 aa14.38□□□□□ -0.11
TNRC18-209ENST00000464852 HSP90AB2PQ58FF8 381 aa14.38□□□□□ -0.11
TNRC18-209ENST00000464852 YTHDC1Q96MU7 727 aaKnown RBP14.38□□□□□ -0.11
TNRC18-209ENST00000464852 NFAT5O94916 1531 aa14.37□□□□□ -0.11
TNRC18-209ENST00000464852 HOXC9P31274 260 aa14.37□□□□□ -0.11
TNRC18-209ENST00000464852 IL13P35225 146 aa14.37□□□□□ -0.11
TNRC18-209ENST00000464852 PDE3BQ13370 1112 aa14.37□□□□□ -0.11
TNRC18-209ENST00000464852 PROM2Q8N271 834 aa14.37□□□□□ -0.11
TNRC18-209ENST00000464852 PNNQ9H307 717 aaKnown RBP14.37□□□□□ -0.11
TNRC18-209ENST00000464852 RTL1A6NKG5 1358 aa14.36□□□□□ -0.11
TNRC18-209ENST00000464852 U2SURPO15042 1029 aaKnown RBP14.36□□□□□ -0.11
TNRC18-209ENST00000464852 NPM3O75607 178 aaKnown RBP14.36□□□□□ -0.11
TNRC18-209ENST00000464852 U2AF1L5P0DN76 240 aaPredicted RBP14.36□□□□□ -0.11
TNRC18-209ENST00000464852 ZC3H6P61129 1189 aaKnown RBP14.36□□□□□ -0.11
TNRC18-209ENST00000464852 U2AF1Q01081 240 aaKnown RBP eCLIP14.36□□□□□ -0.11
TNRC18-209ENST00000464852 COL3A1P02461 1466 aaPredicted RBP14.36□□□□□ -0.11
TNRC18-209ENST00000464852 PLSCR1O15162 318 aa14.35□□□□□ -0.11
TNRC18-209ENST00000464852 PRELPP51888 382 aa14.35□□□□□ -0.11
TNRC18-209ENST00000464852 EIF4A2Q14240 407 aaKnown RBP14.35□□□□□ -0.11
TNRC18-209ENST00000464852 CPDO75976 1380 aa14.34□□□□□ -0.11
TNRC18-209ENST00000464852 ZBTB7CA1YPR0 619 aa14.34□□□□□ -0.11
TNRC18-209ENST00000464852 FCHSD2O94868 740 aa14.34□□□□□ -0.11
TNRC18-209ENST00000464852 ARXQ96QS3 562 aa14.34□□□□□ -0.11
TNRC18-209ENST00000464852 CRYBG1Q9Y4K1 1723 aa14.34□□□□□ -0.11
TNRC18-209ENST00000464852 LTN1O94822 1766 aa14.34□□□□□ -0.11
TNRC18-209ENST00000464852 PEAK1Q9H792 1746 aa14.33□□□□□ -0.12
TNRC18-209ENST00000464852 HNRNPUQ00839 825 aaKnown RBP eCLIP14.33□□□□□ -0.12
TNRC18-209ENST00000464852 PTF1AQ7RTS3 328 aa14.33□□□□□ -0.12
TNRC18-209ENST00000464852 DNAJC5GQ8N7S2 189 aa14.33□□□□□ -0.12
TNRC18-209ENST00000464852 BCL11BQ9C0K0 894 aaPredicted RBP14.33□□□□□ -0.12
TNRC18-209ENST00000464852 USP35Q9P2H5 1018 aa14.33□□□□□ -0.12
TNRC18-209ENST00000464852 PHRF1Q9P1Y6 1649 aaKnown RBP14.33□□□□□ -0.12
TNRC18-209ENST00000464852 MAP3K5Q99683 1374 aa14.33□□□□□ -0.12
TNRC18-209ENST00000464852 RUNDC1Q96C34 613 aa14.32□□□□□ -0.12
TNRC18-209ENST00000464852 MTFR1LQ9H019 292 aa14.32□□□□□ -0.12
TNRC18-209ENST00000464852 STRN4Q9NRL3 753 aa14.32□□□□□ -0.12
TNRC18-209ENST00000464852 BARGINQ6ZT62 677 aa14.31□□□□□ -0.12
TNRC18-209ENST00000464852 KIAA0232Q92628 1395 aa14.31□□□□□ -0.12
TNRC18-209ENST00000464852 NGEFQ8N5V2 710 aa14.3□□□□□ -0.12
TNRC18-209ENST00000464852 PRDM11Q9NQV5 511 aa14.3□□□□□ -0.12
TNRC18-209ENST00000464852 AXIN2Q9Y2T1 843 aa14.3□□□□□ -0.12
TNRC18-209ENST00000464852 ATP10DQ9P241 1426 aa14.3□□□□□ -0.12
TNRC18-209ENST00000464852 NEFMP07197 916 aa14.29□□□□□ -0.12
TNRC18-209ENST00000464852 CHRNA2Q15822 529 aa14.29□□□□□ -0.12
TNRC18-209ENST00000464852 SLC15A2Q16348 729 aa14.29□□□□□ -0.12
TNRC18-209ENST00000464852 PELP1Q8IZL8 1130 aaKnown RBP14.29□□□□□ -0.12
TNRC18-209ENST00000464852 LTV1Q96GA3 475 aaPredicted RBP14.29□□□□□ -0.12
TNRC18-209ENST00000464852 EYA1Q99502 592 aa14.29□□□□□ -0.12
TNRC18-209ENST00000464852 ABCC6O95255 1503 aa14.28□□□□□ -0.12
TNRC18-209ENST00000464852 SULT6B1Q6IMI4 303 aa14.28□□□□□ -0.12
TNRC18-209ENST00000464852 CCDC146Q8IYE0 955 aa14.28□□□□□ -0.12
TNRC18-209ENST00000464852 ANKRD24Q8TF21 1146 aa14.28□□□□□ -0.12
TNRC18-209ENST00000464852 PLEKHF1Q96S99 279 aa14.28□□□□□ -0.12
TNRC18-209ENST00000464852 RSPH6AQ9H0K4 717 aa14.28□□□□□ -0.12
TNRC18-209ENST00000464852 IGSF1Q8N6C5 1336 aa14.27□□□□□ -0.12
TNRC18-209ENST00000464852 HMOX1P09601 288 aa14.27□□□□□ -0.13
TNRC18-209ENST00000464852 COL18A1P39060 1754 aa14.27□□□□□ -0.13
TNRC18-209ENST00000464852 ZBED9Q6R2W3 1325 aa14.26□□□□□ -0.13
TNRC18-209ENST00000464852 MAPK8IP3Q9UPT6 1336 aa14.26□□□□□ -0.13
TNRC18-209ENST00000464852 APAF1O14727 1248 aa14.26□□□□□ -0.13
TNRC18-209ENST00000464852 TNS4Q8IZW8 715 aa14.26□□□□□ -0.13
TNRC18-209ENST00000464852 TCP11L2Q8N4U5 519 aa14.26□□□□□ -0.13
TNRC18-209ENST00000464852 GPBP1L1Q9HC44 474 aaPredicted RBP14.26□□□□□ -0.13
TNRC18-209ENST00000464852 STK32BQ9NY57 414 aa14.26□□□□□ -0.13
TNRC18-209ENST00000464852 PARP4Q9UKK3 1724 aaKnown RBP14.26□□□□□ -0.13
TNRC18-209ENST00000464852 PRKAR2BP31323 418 aa14.25□□□□□ -0.13
TNRC18-209ENST00000464852 NBPF6Q5VWK0 638 aa14.25□□□□□ -0.13
TNRC18-209ENST00000464852 NBPF4Q96M43 638 aa14.25□□□□□ -0.13
TNRC18-209ENST00000464852 KDRP35968 1356 aa14.24□□□□□ -0.13
TNRC18-209ENST00000464852 ERBB3P21860 1342 aa14.24□□□□□ -0.13
TNRC18-209ENST00000464852 CENPBP07199 599 aaPredicted RBP14.24□□□□□ -0.13
TNRC18-209ENST00000464852 CSB-PGBD3P0DP91 1061 aa14.24□□□□□ -0.13
TNRC18-209ENST00000464852 YBX3P16989 372 aaKnown RBP eCLIP14.24□□□□□ -0.13
TNRC18-209ENST00000464852 EVA1CP58658 441 aa14.24□□□□□ -0.13
TNRC18-209ENST00000464852 PCDH10Q9P2E7 1040 aa14.24□□□□□ -0.13
TNRC18-209ENST00000464852 RGPD5Q99666 1765 aa14.24□□□□□ -0.13
TNRC18-209ENST00000464852 LARP1Q6PKG0 1096 aaKnown RBP14.23□□□□□ -0.13
TNRC18-209ENST00000464852 AEBP1Q8IUX7 1158 aa14.23□□□□□ -0.13
TNRC18-209ENST00000464852 APLP1P51693 650 aa14.22□□□□□ -0.13
TNRC18-209ENST00000464852 TXNRD1Q16881 649 aa14.22□□□□□ -0.13
TNRC18-209ENST00000464852 NLGN2Q8NFZ4 835 aa14.22□□□□□ -0.13
TNRC18-209ENST00000464852 ZNF526Q8TF50 670 aaPredicted RBP14.22□□□□□ -0.13
TNRC18-209ENST00000464852 PHACTR3Q96KR7 559 aa14.22□□□□□ -0.13
TNRC18-209ENST00000464852 NLRP2Q9NX02 1062 aa14.22□□□□□ -0.13
TNRC18-209ENST00000464852 SALL2Q9Y467 1007 aaPredicted RBP14.22□□□□□ -0.13
TNRC18-209ENST00000464852 PCNTO95613 3336 aa14.22□□□□□ -0.13
TNRC18-209ENST00000464852 WDR17Q8IZU2 1322 aa14.21□□□□□ -0.13
TNRC18-209ENST00000464852 TMPOP42166 694 aaKnown RBP14.21□□□□□ -0.13
TNRC18-209ENST00000464852 CCDC27Q2M243 656 aa14.21□□□□□ -0.13
TNRC18-209ENST00000464852 KLHL34Q8N239 644 aa14.21□□□□□ -0.13
TNRC18-209ENST00000464852 RIPK4P57078 832 aa14.2□□□□□ -0.14
TNRC18-209ENST00000464852 NEUROD2Q15784 382 aa14.2□□□□□ -0.14
TNRC18-209ENST00000464852 NFE2L2Q16236 605 aa14.2□□□□□ -0.14
TNRC18-209ENST00000464852 OVOS2A0A0G2JMS6 1433 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms