RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 ANO8Q9HCE9 1232 aaPredicted RBP35.73■■■■□ 3.31
U2AF1-206ENST00000464750 DOT1LQ8TEK3 1739 aa35.73■■■■□ 3.31
U2AF1-206ENST00000464750 TXNRD1Q16881 649 aa35.71■■■■□ 3.31
U2AF1-206ENST00000464750 ZCRB1Q8TBF4 217 aaKnown RBP35.68■■■■□ 3.3
U2AF1-206ENST00000464750 CASZ1Q86V15 1759 aa35.66■■■■□ 3.3
U2AF1-206ENST00000464750 PPM1GO15355 546 aaPredicted RBP35.65■■■■□ 3.3
U2AF1-206ENST00000464750 RAPGEF4Q8WZA2 1011 aa35.65■■■■□ 3.3
U2AF1-206ENST00000464750 PANK3Q9H999 370 aa35.65■■■■□ 3.3
U2AF1-206ENST00000464750 PAPPAQ13219 1627 aa35.61■■■■□ 3.29
U2AF1-206ENST00000464750 TATP17735 454 aaPredicted RBP35.61■■■■□ 3.29
U2AF1-206ENST00000464750 WASHC2AQ641Q2 1341 aa35.59■■■■□ 3.29
U2AF1-206ENST00000464750 STK32BQ9NY57 414 aa35.59■■■■□ 3.29
U2AF1-206ENST00000464750 NCAPD2Q15021 1401 aa35.58■■■■□ 3.29
U2AF1-206ENST00000464750 PKD1L3Q7Z443 1732 aa35.58■■■■□ 3.29
U2AF1-206ENST00000464750 POLKQ9UBT6 870 aa35.58■■■■□ 3.29
U2AF1-206ENST00000464750 NSD2O96028 1365 aa35.57■■■■□ 3.28
U2AF1-206ENST00000464750 TNNT2P45379 298 aaPredicted RBP35.57■■■■□ 3.28
U2AF1-206ENST00000464750 SYTL4Q96C24 671 aaPredicted RBP35.57■■■■□ 3.28
U2AF1-206ENST00000464750 PRIM1P49642 420 aaKnown RBP35.54■■■■□ 3.28
U2AF1-206ENST00000464750 SPON1Q9HCB6 807 aa35.54■■■■□ 3.28
U2AF1-206ENST00000464750 PCDH11XQ9BZA7 1347 aa35.54■■■■□ 3.28
U2AF1-206ENST00000464750 PCDH11YQ9BZA8 1340 aa35.54■■■■□ 3.28
U2AF1-206ENST00000464750 SLC15A2Q16348 729 aa35.53■■■■□ 3.28
U2AF1-206ENST00000464750 LY75O60449 1722 aa35.52■■■■□ 3.28
U2AF1-206ENST00000464750 PDGFDQ9GZP0 370 aaPredicted RBP35.51■■■■□ 3.28
U2AF1-206ENST00000464750 KIF7Q2M1P5 1343 aa35.5■■■■□ 3.27
U2AF1-206ENST00000464750 EYA1Q99502 592 aa35.48■■■■□ 3.27
U2AF1-206ENST00000464750 LRRC4BQ9NT99 713 aa35.48■■■■□ 3.27
U2AF1-206ENST00000464750 TOGARAM1Q9Y4F4 1720 aa35.47■■■■□ 3.27
U2AF1-206ENST00000464750 EIF4A2Q14240 407 aaKnown RBP35.45■■■■□ 3.27
U2AF1-206ENST00000464750 SLC27A3Q5K4L6 730 aa35.45■■■■□ 3.27
U2AF1-206ENST00000464750 KNSTRNQ9Y448 316 aa35.45■■■■□ 3.27
U2AF1-206ENST00000464750 PPP1R1BQ9UD71 204 aaPredicted RBP35.44■■■■□ 3.26
U2AF1-206ENST00000464750 CYP27B1O15528 508 aa35.43■■■■□ 3.26
U2AF1-206ENST00000464750 ZBTB7AO95365 584 aa35.43■■■■□ 3.26
U2AF1-206ENST00000464750 MORC1Q86VD1 984 aa35.43■■■■□ 3.26
U2AF1-206ENST00000464750 ITGB4P16144 1822 aa35.43■■■■□ 3.26
U2AF1-206ENST00000464750 ZNF827Q17R98 1081 aa35.42■■■■□ 3.26
U2AF1-206ENST00000464750 QSER1Q2KHR3 1735 aa35.42■■■■□ 3.26
U2AF1-206ENST00000464750 TUBGCP6Q96RT7 1819 aa35.4■■■■□ 3.26
U2AF1-206ENST00000464750 SPG7Q9UQ90 795 aa35.38■■■■□ 3.25
U2AF1-206ENST00000464750 KCNQ4P56696 695 aa35.36■■■■□ 3.25
U2AF1-206ENST00000464750 AKT1S1Q96B36 256 aa35.36■■■■□ 3.25
U2AF1-206ENST00000464750 IGSF1Q8N6C5 1336 aa35.35■■■■□ 3.25
U2AF1-206ENST00000464750 AMER1Q5JTC6 1135 aaPredicted RBP35.35■■■■□ 3.25
U2AF1-206ENST00000464750 ATF5Q9Y2D1 282 aaPredicted RBP35.35■■■■□ 3.25
U2AF1-206ENST00000464750 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.34■■■■□ 3.25
U2AF1-206ENST00000464750 CCNL1Q9UK58 526 aaPredicted RBP35.34■■■■□ 3.25
U2AF1-206ENST00000464750 MTFR1LQ9H019 292 aa35.33■■■■□ 3.25
U2AF1-206ENST00000464750 C5P01031 1676 aa35.31■■■■□ 3.24
U2AF1-206ENST00000464750 PLEKHG2Q9H7P9 1386 aa35.31■■■■□ 3.24
U2AF1-206ENST00000464750 PTGER2P43116 358 aa35.31■■■■□ 3.24
U2AF1-206ENST00000464750 MPRIPQ6WCQ1 1025 aa35.31■■■■□ 3.24
U2AF1-206ENST00000464750 NKX1-1Q15270 411 aaPredicted RBP35.3■■■■□ 3.24
U2AF1-206ENST00000464750 PALLDQ8WX93 1383 aa35.29■■■■□ 3.24
U2AF1-206ENST00000464750 TAF1LQ8IZX4 1826 aa35.28■■■■□ 3.24
U2AF1-206ENST00000464750 PHKG2P15735 406 aa35.26■■■■□ 3.24
U2AF1-206ENST00000464750 IFNL2Q8IZJ0 200 aa35.26■■■■□ 3.24
U2AF1-206ENST00000464750 TFCP2L1Q9NZI6 479 aa35.25■■■■□ 3.23
U2AF1-206ENST00000464750 PNPLA7Q6ZV29 1317 aa35.25■■■■□ 3.23
U2AF1-206ENST00000464750 PER1O15534 1290 aaPredicted RBP35.23■■■■□ 3.23
U2AF1-206ENST00000464750 SGIP1Q9BQI5 828 aa35.23■■■■□ 3.23
U2AF1-206ENST00000464750 PIGBQ92521 554 aa35.22■■■■□ 3.23
U2AF1-206ENST00000464750 COL24A1Q17RW2 1714 aa35.2■■■■□ 3.23
U2AF1-206ENST00000464750 SMARCC1Q92922 1105 aaPredicted RBP35.2■■■■□ 3.23
U2AF1-206ENST00000464750 AEBP1Q8IUX7 1158 aa35.19■■■■□ 3.22
U2AF1-206ENST00000464750 CC2D1BQ5T0F9 858 aaKnown RBP35.18■■■■□ 3.22
U2AF1-206ENST00000464750 TMOD3Q9NYL9 352 aa35.18■■■■□ 3.22
U2AF1-206ENST00000464750 SLC16A10Q8TF71 515 aa35.17■■■■□ 3.22
U2AF1-206ENST00000464750 C4BP0C0L5 1744 aa35.16■■■■□ 3.22
U2AF1-206ENST00000464750 IL13P35225 146 aa35.16■■■■□ 3.22
U2AF1-206ENST00000464750 PLEKHO1Q53GL0 409 aaPredicted RBP35.16■■■■□ 3.22
U2AF1-206ENST00000464750 KDRP35968 1356 aa35.14■■■■□ 3.22
U2AF1-206ENST00000464750 MTHFSP49914 203 aa35.14■■■■□ 3.22
U2AF1-206ENST00000464750 AMOTQ4VCS5 1084 aa35.13■■■■□ 3.21
U2AF1-206ENST00000464750 SULT6B1Q6IMI4 303 aa35.13■■■■□ 3.21
U2AF1-206ENST00000464750 ZNF530Q6P9A1 599 aaPredicted RBP35.13■■■■□ 3.21
U2AF1-206ENST00000464750 ARXQ96QS3 562 aa35.13■■■■□ 3.21
U2AF1-206ENST00000464750 FHDC1Q9C0D6 1143 aaPredicted RBP35.13■■■■□ 3.21
U2AF1-206ENST00000464750 NPC1L1Q9UHC9 1359 aa35.13■■■■□ 3.21
U2AF1-206ENST00000464750 HMGB2P26583 209 aaKnown RBP35.12■■■■□ 3.21
U2AF1-206ENST00000464750 HSP90AB1P08238 724 aaKnown RBP35.1■■■■□ 3.21
U2AF1-206ENST00000464750 KDM6AO15550 1401 aaPredicted RBP35.09■■■■□ 3.21
U2AF1-206ENST00000464750 ASAP1Q9ULH1 1129 aa35.09■■■■□ 3.21
U2AF1-206ENST00000464750 UBR3Q6ZT12 1888 aa35.09■■■■□ 3.21
U2AF1-206ENST00000464750 DCAF8L1A6NGE4 600 aa35.08■■■■□ 3.21
U2AF1-206ENST00000464750 MSH5O43196 834 aa35.08■■■■□ 3.21
U2AF1-206ENST00000464750 COL23A1Q86Y22 540 aaPredicted RBP35.08■■■■□ 3.21
U2AF1-206ENST00000464750 DCAF5Q96JK2 942 aa35.08■■■■□ 3.21
U2AF1-206ENST00000464750 LOC102724428A0A0B4J2F2 783 aa35.07■■■■□ 3.2
U2AF1-206ENST00000464750 POLD1P28340 1107 aa35.07■■■■□ 3.2
U2AF1-206ENST00000464750 SIK1P57059 783 aa35.07■■■■□ 3.2
U2AF1-206ENST00000464750 CNGB1Q14028 1251 aaPredicted RBP35.07■■■■□ 3.2
U2AF1-206ENST00000464750 SYT17Q9BSW7 474 aa35.07■■■■□ 3.2
U2AF1-206ENST00000464750 ERVV-2B6SEH9 535 aa35.05■■■■□ 3.2
U2AF1-206ENST00000464750 MAP3K5Q99683 1374 aa35.04■■■■□ 3.2
U2AF1-206ENST00000464750 C1orf141Q5JVX7 400 aa35.04■■■■□ 3.2
U2AF1-206ENST00000464750 AK7Q96M32 723 aa35.04■■■■□ 3.2
U2AF1-206ENST00000464750 ATG3Q9NT62 314 aa35.04■■■■□ 3.2
U2AF1-206ENST00000464750 SCN11AQ9UI33 1791 aa35.02■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms