RNA–Protein interactions for RNA: ENST00000464317.3

RN7SL541P-201, Transcript of RNA, 7SL, cytoplasmic 541, pseudogene, humanhuman

BASIC

Gene RN7SL541P, Length 283 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL541P-201ENST00000464317 UTRNP46939 3433 aa12.78□□□□□ -0.36
RN7SL541P-201ENST00000464317 MSH5O43196 834 aa12.77□□□□□ -0.37
RN7SL541P-201ENST00000464317 FBLN1P23142 703 aa12.77□□□□□ -0.37
RN7SL541P-201ENST00000464317 C1QTNF8P60827 252 aa12.77□□□□□ -0.37
RN7SL541P-201ENST00000464317 CCNL1Q9UK58 526 aaPredicted RBP12.77□□□□□ -0.37
RN7SL541P-201ENST00000464317 CHD4Q14839 1912 aa12.77□□□□□ -0.37
RN7SL541P-201ENST00000464317 ST20-MTHFSA0A0A6YYL1 179 aa12.76□□□□□ -0.37
RN7SL541P-201ENST00000464317 SLC24A1O60721 1099 aa12.76□□□□□ -0.37
RN7SL541P-201ENST00000464317 TESK2Q96S53 571 aa12.76□□□□□ -0.37
RN7SL541P-201ENST00000464317 NSD2O96028 1365 aa12.75□□□□□ -0.37
RN7SL541P-201ENST00000464317 QSER1Q2KHR3 1735 aa12.75□□□□□ -0.37
RN7SL541P-201ENST00000464317 USP47Q96K76 1375 aa12.75□□□□□ -0.37
RN7SL541P-201ENST00000464317 DOT1LQ8TEK3 1739 aa12.74□□□□□ -0.37
RN7SL541P-201ENST00000464317 MEGF6O75095 1541 aa12.74□□□□□ -0.37
RN7SL541P-201ENST00000464317 RTL1A6NKG5 1358 aa12.74□□□□□ -0.37
RN7SL541P-201ENST00000464317 RRS1Q15050 365 aaKnown RBP12.74□□□□□ -0.37
RN7SL541P-201ENST00000464317 NLGN2Q8NFZ4 835 aa12.74□□□□□ -0.37
RN7SL541P-201ENST00000464317 RAPGEF4Q8WZA2 1011 aa12.74□□□□□ -0.37
RN7SL541P-201ENST00000464317 SMG6Q86US8 1419 aaKnown RBP12.73□□□□□ -0.37
RN7SL541P-201ENST00000464317 CGNL1Q0VF96 1302 aa12.73□□□□□ -0.37
RN7SL541P-201ENST00000464317 GIGYF1O75420 1035 aaPredicted RBP12.73□□□□□ -0.37
RN7SL541P-201ENST00000464317 NBPF6Q5VWK0 638 aa12.73□□□□□ -0.37
RN7SL541P-201ENST00000464317 USHBP1Q8N6Y0 703 aa12.73□□□□□ -0.37
RN7SL541P-201ENST00000464317 NBPF4Q96M43 638 aa12.73□□□□□ -0.37
RN7SL541P-201ENST00000464317 TATP17735 454 aaPredicted RBP12.72□□□□□ -0.37
RN7SL541P-201ENST00000464317 COL23A1Q86Y22 540 aaPredicted RBP12.72□□□□□ -0.37
RN7SL541P-201ENST00000464317 GGNBP2Q9H3C7 697 aa12.72□□□□□ -0.37
RN7SL541P-201ENST00000464317 LY75O60449 1722 aa12.71□□□□□ -0.37
RN7SL541P-201ENST00000464317 FYB1O15117 783 aa12.71□□□□□ -0.37
RN7SL541P-201ENST00000464317 GRIN3BO60391 1043 aa12.71□□□□□ -0.37
RN7SL541P-201ENST00000464317 MSL1Q68DK7 614 aa12.71□□□□□ -0.37
RN7SL541P-201ENST00000464317 TUBGCP6Q96RT7 1819 aa12.71□□□□□ -0.38
RN7SL541P-201ENST00000464317 RGPD2P0DJD1 1756 aa12.71□□□□□ -0.38
RN7SL541P-201ENST00000464317 COL24A1Q17RW2 1714 aa12.71□□□□□ -0.38
RN7SL541P-201ENST00000464317 SHANK3Q9BYB0 1731 aa12.71□□□□□ -0.38
RN7SL541P-201ENST00000464317 HMGB2P26583 209 aaKnown RBP12.7□□□□□ -0.38
RN7SL541P-201ENST00000464317 TMF1P82094 1093 aa12.7□□□□□ -0.38
RN7SL541P-201ENST00000464317 PCDH11XQ9BZA7 1347 aa12.69□□□□□ -0.38
RN7SL541P-201ENST00000464317 PCDH11YQ9BZA8 1340 aa12.69□□□□□ -0.38
RN7SL541P-201ENST00000464317 YBX3P16989 372 aaKnown RBP eCLIP12.69□□□□□ -0.38
RN7SL541P-201ENST00000464317 HSP90AB2PQ58FF8 381 aa12.69□□□□□ -0.38
RN7SL541P-201ENST00000464317 MPRIPQ6WCQ1 1025 aa12.68□□□□□ -0.38
RN7SL541P-201ENST00000464317 FLAD1Q8NFF5 587 aa12.68□□□□□ -0.38
RN7SL541P-201ENST00000464317 INSRP06213 1382 aa12.68□□□□□ -0.38
RN7SL541P-201ENST00000464317 PALLDQ8WX93 1383 aa12.68□□□□□ -0.38
RN7SL541P-201ENST00000464317 FLT4P35916 1363 aa12.67□□□□□ -0.38
RN7SL541P-201ENST00000464317 CDCA8Q53HL2 280 aa12.66□□□□□ -0.38
RN7SL541P-201ENST00000464317 SMARCC1Q92922 1105 aaPredicted RBP12.66□□□□□ -0.38
RN7SL541P-201ENST00000464317 AK7Q96M32 723 aa12.66□□□□□ -0.38
RN7SL541P-201ENST00000464317 CD2APQ9Y5K6 639 aa12.66□□□□□ -0.38
RN7SL541P-201ENST00000464317 CYP27B1O15528 508 aa12.65□□□□□ -0.38
RN7SL541P-201ENST00000464317 KIF24Q5T7B8 1368 aa12.65□□□□□ -0.38
RN7SL541P-201ENST00000464317 C5P01031 1676 aa12.64□□□□□ -0.39
RN7SL541P-201ENST00000464317 PHF14O94880 888 aa12.64□□□□□ -0.39
RN7SL541P-201ENST00000464317 PPM1GO15355 546 aaPredicted RBP12.63□□□□□ -0.39
RN7SL541P-201ENST00000464317 EMILIN1Q9Y6C2 1016 aa12.63□□□□□ -0.39
RN7SL541P-201ENST00000464317 ATP10DQ9P241 1426 aa12.62□□□□□ -0.39
RN7SL541P-201ENST00000464317 PIGBQ92521 554 aa12.62□□□□□ -0.39
RN7SL541P-201ENST00000464317 SPG7Q9UQ90 795 aa12.62□□□□□ -0.39
RN7SL541P-201ENST00000464317 NSD3Q9BZ95 1437 aa12.62□□□□□ -0.39
RN7SL541P-201ENST00000464317 KIF20BQ96Q89 1820 aa12.61□□□□□ -0.39
RN7SL541P-201ENST00000464317 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.61□□□□□ -0.39
RN7SL541P-201ENST00000464317 GPBP1L1Q9HC44 474 aaPredicted RBP12.61□□□□□ -0.39
RN7SL541P-201ENST00000464317 GOLGB1Q14789 3259 aaKnown RBP12.61□□□□□ -0.39
RN7SL541P-201ENST00000464317 C4BP0C0L5 1744 aa12.6□□□□□ -0.39
RN7SL541P-201ENST00000464317 SSFA2P28290 1259 aa12.6□□□□□ -0.39
RN7SL541P-201ENST00000464317 NKX1-1Q15270 411 aaPredicted RBP12.6□□□□□ -0.39
RN7SL541P-201ENST00000464317 SMIM5Q71RC9 77 aa12.6□□□□□ -0.39
RN7SL541P-201ENST00000464317 AMIGO3Q86WK7 504 aa12.6□□□□□ -0.39
RN7SL541P-201ENST00000464317 CARD14Q9BXL6 1004 aa12.6□□□□□ -0.39
RN7SL541P-201ENST00000464317 WWC3Q9ULE0 1092 aa12.6□□□□□ -0.39
RN7SL541P-201ENST00000464317 TAF1LQ8IZX4 1826 aa12.6□□□□□ -0.39
RN7SL541P-201ENST00000464317 IGSF1Q8N6C5 1336 aa12.6□□□□□ -0.39
RN7SL541P-201ENST00000464317 LOC102724428A0A0B4J2F2 783 aa12.59□□□□□ -0.39
RN7SL541P-201ENST00000464317 SIK1P57059 783 aa12.59□□□□□ -0.39
RN7SL541P-201ENST00000464317 ZNF526Q8TF50 670 aaPredicted RBP12.59□□□□□ -0.39
RN7SL541P-201ENST00000464317 TMOD3Q9NYL9 352 aa12.59□□□□□ -0.39
RN7SL541P-201ENST00000464317 TOGARAM1Q9Y4F4 1720 aa12.59□□□□□ -0.39
RN7SL541P-201ENST00000464317 PKD1L3Q7Z443 1732 aa12.58□□□□□ -0.4
RN7SL541P-201ENST00000464317 LINC00116Q8NCU8 138 aa12.58□□□□□ -0.4
RN7SL541P-201ENST00000464317 EYA1Q99502 592 aa12.58□□□□□ -0.4
RN7SL541P-201ENST00000464317 WASHC2AQ641Q2 1341 aa12.58□□□□□ -0.4
RN7SL541P-201ENST00000464317 ITGB4P16144 1822 aa12.58□□□□□ -0.4
RN7SL541P-201ENST00000464317 NCAPD2Q15021 1401 aa12.57□□□□□ -0.4
RN7SL541P-201ENST00000464317 GNPATO15228 680 aa12.57□□□□□ -0.4
RN7SL541P-201ENST00000464317 ATP6V1AP38606 617 aa12.57□□□□□ -0.4
RN7SL541P-201ENST00000464317 IFNL2Q8IZJ0 200 aa12.57□□□□□ -0.4
RN7SL541P-201ENST00000464317 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.57□□□□□ -0.4
RN7SL541P-201ENST00000464317 ASAP1Q9ULH1 1129 aa12.57□□□□□ -0.4
RN7SL541P-201ENST00000464317 ADCY9O60503 1353 aa12.56□□□□□ -0.4
RN7SL541P-201ENST00000464317 PHKG2P15735 406 aa12.56□□□□□ -0.4
RN7SL541P-201ENST00000464317 ITPK1Q13572 414 aa12.56□□□□□ -0.4
RN7SL541P-201ENST00000464317 UBR3Q6ZT12 1888 aa12.55□□□□□ -0.4
RN7SL541P-201ENST00000464317 MMP10P09238 476 aa12.54□□□□□ -0.4
RN7SL541P-201ENST00000464317 HSPA6P17066 643 aa12.54□□□□□ -0.4
RN7SL541P-201ENST00000464317 IFFO2Q5TF58 517 aa12.54□□□□□ -0.4
RN7SL541P-201ENST00000464317 POLR3GLQ9BT43 218 aa12.54□□□□□ -0.4
RN7SL541P-201ENST00000464317 ATG3Q9NT62 314 aa12.54□□□□□ -0.4
RN7SL541P-201ENST00000464317 POLKQ9UBT6 870 aa12.54□□□□□ -0.4
RN7SL541P-201ENST00000464317 TNNT2P45379 298 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms