RNA–Protein interactions for RNA: ENST00000464225.5

CHKB-203, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-203ENST00000464225 ANKRD26Q9UPS8 1709 aa13.93□□□□□ -0.18
CHKB-203ENST00000464225 DOT1LQ8TEK3 1739 aa13.93□□□□□ -0.18
CHKB-203ENST00000464225 ZCRB1Q8TBF4 217 aaKnown RBP13.92□□□□□ -0.18
CHKB-203ENST00000464225 PDGFDQ9GZP0 370 aaPredicted RBP13.92□□□□□ -0.18
CHKB-203ENST00000464225 KAT6BQ8WYB5 2073 aa13.92□□□□□ -0.18
CHKB-203ENST00000464225 PAPPAQ13219 1627 aa13.91□□□□□ -0.18
CHKB-203ENST00000464225 SPON1Q9HCB6 807 aa13.91□□□□□ -0.18
CHKB-203ENST00000464225 PPM1GO15355 546 aaPredicted RBP13.9□□□□□ -0.18
CHKB-203ENST00000464225 RAPGEF4Q8WZA2 1011 aa13.9□□□□□ -0.18
CHKB-203ENST00000464225 STK32BQ9NY57 414 aa13.9□□□□□ -0.18
CHKB-203ENST00000464225 NSD2O96028 1365 aa13.9□□□□□ -0.18
CHKB-203ENST00000464225 PRIM1P49642 420 aaKnown RBP13.89□□□□□ -0.19
CHKB-203ENST00000464225 SLC15A2Q16348 729 aa13.89□□□□□ -0.19
CHKB-203ENST00000464225 SYTL4Q96C24 671 aaPredicted RBP13.89□□□□□ -0.19
CHKB-203ENST00000464225 NCAPD2Q15021 1401 aa13.89□□□□□ -0.19
CHKB-203ENST00000464225 TATP17735 454 aaPredicted RBP13.88□□□□□ -0.19
CHKB-203ENST00000464225 PANK3Q9H999 370 aa13.88□□□□□ -0.19
CHKB-203ENST00000464225 LRRC4BQ9NT99 713 aa13.88□□□□□ -0.19
CHKB-203ENST00000464225 WASHC2AQ641Q2 1341 aa13.88□□□□□ -0.19
CHKB-203ENST00000464225 MAP2P11137 1827 aaKnown RBP13.87□□□□□ -0.19
CHKB-203ENST00000464225 ZBTB7AO95365 584 aa13.87□□□□□ -0.19
CHKB-203ENST00000464225 POLKQ9UBT6 870 aa13.87□□□□□ -0.19
CHKB-203ENST00000464225 TNNT2P45379 298 aaPredicted RBP13.86□□□□□ -0.19
CHKB-203ENST00000464225 ZNF827Q17R98 1081 aa13.86□□□□□ -0.19
CHKB-203ENST00000464225 PPP1R1BQ9UD71 204 aaPredicted RBP13.86□□□□□ -0.19
CHKB-203ENST00000464225 PCDH11XQ9BZA7 1347 aa13.86□□□□□ -0.19
CHKB-203ENST00000464225 PCDH11YQ9BZA8 1340 aa13.86□□□□□ -0.19
CHKB-203ENST00000464225 LY75O60449 1722 aa13.85□□□□□ -0.19
CHKB-203ENST00000464225 PKD1L3Q7Z443 1732 aa13.85□□□□□ -0.19
CHKB-203ENST00000464225 SLC27A3Q5K4L6 730 aa13.85□□□□□ -0.19
CHKB-203ENST00000464225 CYP27B1O15528 508 aa13.84□□□□□ -0.19
CHKB-203ENST00000464225 KCNQ4P56696 695 aa13.84□□□□□ -0.19
CHKB-203ENST00000464225 EYA1Q99502 592 aa13.84□□□□□ -0.19
CHKB-203ENST00000464225 PTGER2P43116 358 aa13.83□□□□□ -0.2
CHKB-203ENST00000464225 AKT1S1Q96B36 256 aa13.83□□□□□ -0.2
CHKB-203ENST00000464225 ATF5Q9Y2D1 282 aaPredicted RBP13.83□□□□□ -0.2
CHKB-203ENST00000464225 TOGARAM1Q9Y4F4 1720 aa13.83□□□□□ -0.2
CHKB-203ENST00000464225 EIF4A2Q14240 407 aaKnown RBP13.82□□□□□ -0.2
CHKB-203ENST00000464225 MTFR1LQ9H019 292 aa13.82□□□□□ -0.2
CHKB-203ENST00000464225 KIF7Q2M1P5 1343 aa13.82□□□□□ -0.2
CHKB-203ENST00000464225 SGIP1Q9BQI5 828 aa13.8□□□□□ -0.2
CHKB-203ENST00000464225 CCNL1Q9UK58 526 aaPredicted RBP13.8□□□□□ -0.2
CHKB-203ENST00000464225 QSER1Q2KHR3 1735 aa13.8□□□□□ -0.2
CHKB-203ENST00000464225 TUBGCP6Q96RT7 1819 aa13.8□□□□□ -0.2
CHKB-203ENST00000464225 SPG7Q9UQ90 795 aa13.79□□□□□ -0.2
CHKB-203ENST00000464225 KNSTRNQ9Y448 316 aa13.79□□□□□ -0.2
CHKB-203ENST00000464225 ITGB4P16144 1822 aa13.78□□□□□ -0.2
CHKB-203ENST00000464225 NKX1-1Q15270 411 aaPredicted RBP13.78□□□□□ -0.2
CHKB-203ENST00000464225 MPRIPQ6WCQ1 1025 aa13.78□□□□□ -0.2
CHKB-203ENST00000464225 MORC1Q86VD1 984 aa13.78□□□□□ -0.2
CHKB-203ENST00000464225 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.78□□□□□ -0.25e-8■□□□□ 11
CHKB-203ENST00000464225 PNPLA7Q6ZV29 1317 aa13.78□□□□□ -0.2
CHKB-203ENST00000464225 IGSF1Q8N6C5 1336 aa13.78□□□□□ -0.2
CHKB-203ENST00000464225 PALLDQ8WX93 1383 aa13.78□□□□□ -0.2
CHKB-203ENST00000464225 AMER1Q5JTC6 1135 aaPredicted RBP13.77□□□□□ -0.21
CHKB-203ENST00000464225 TFCP2L1Q9NZI6 479 aa13.77□□□□□ -0.21
CHKB-203ENST00000464225 C5P01031 1676 aa13.76□□□□□ -0.21
CHKB-203ENST00000464225 PLEKHG2Q9H7P9 1386 aa13.76□□□□□ -0.21
CHKB-203ENST00000464225 PHKG2P15735 406 aa13.76□□□□□ -0.21
CHKB-203ENST00000464225 FHDC1Q9C0D6 1143 aaPredicted RBP13.76□□□□□ -0.21
CHKB-203ENST00000464225 IFNL2Q8IZJ0 200 aa13.75□□□□□ -0.21
CHKB-203ENST00000464225 PIGBQ92521 554 aa13.75□□□□□ -0.21
CHKB-203ENST00000464225 COL24A1Q17RW2 1714 aa13.74□□□□□ -0.21
CHKB-203ENST00000464225 SLC16A10Q8TF71 515 aa13.74□□□□□ -0.21
CHKB-203ENST00000464225 ARXQ96QS3 562 aa13.74□□□□□ -0.21
CHKB-203ENST00000464225 TAF1LQ8IZX4 1826 aa13.74□□□□□ -0.21
CHKB-203ENST00000464225 AEBP1Q8IUX7 1158 aa13.73□□□□□ -0.21
CHKB-203ENST00000464225 SMARCC1Q92922 1105 aaPredicted RBP13.73□□□□□ -0.21
CHKB-203ENST00000464225 SYT17Q9BSW7 474 aa13.73□□□□□ -0.21
CHKB-203ENST00000464225 PER1O15534 1290 aaPredicted RBP13.72□□□□□ -0.21
CHKB-203ENST00000464225 COL23A1Q86Y22 540 aaPredicted RBP13.72□□□□□ -0.21
CHKB-203ENST00000464225 TMOD3Q9NYL9 352 aa13.72□□□□□ -0.21
CHKB-203ENST00000464225 C4BP0C0L5 1744 aa13.72□□□□□ -0.21
CHKB-203ENST00000464225 MAP3K5Q99683 1374 aa13.71□□□□□ -0.21
CHKB-203ENST00000464225 DCAF8L1A6NGE4 600 aa13.71□□□□□ -0.21
CHKB-203ENST00000464225 IL13P35225 146 aa13.71□□□□□ -0.21
CHKB-203ENST00000464225 ASAP1Q9ULH1 1129 aa13.71□□□□□ -0.21
CHKB-203ENST00000464225 KDRP35968 1356 aa13.71□□□□□ -0.22
CHKB-203ENST00000464225 LOC102724428A0A0B4J2F2 783 aa13.7□□□□□ -0.22
CHKB-203ENST00000464225 MSH5O43196 834 aa13.7□□□□□ -0.22
CHKB-203ENST00000464225 POLD1P28340 1107 aa13.7□□□□□ -0.22
CHKB-203ENST00000464225 SIK1P57059 783 aa13.7□□□□□ -0.22
CHKB-203ENST00000464225 PLEKHO1Q53GL0 409 aaPredicted RBP13.7□□□□□ -0.22
CHKB-203ENST00000464225 CC2D1BQ5T0F9 858 aaKnown RBP13.7□□□□□ -0.22
CHKB-203ENST00000464225 SULT6B1Q6IMI4 303 aa13.7□□□□□ -0.22
CHKB-203ENST00000464225 KDM6AO15550 1401 aaPredicted RBP13.7□□□□□ -0.22
CHKB-203ENST00000464225 HMGB2P26583 209 aaKnown RBP13.69□□□□□ -0.22
CHKB-203ENST00000464225 MTHFSP49914 203 aa13.69□□□□□ -0.22
CHKB-203ENST00000464225 AMOTQ4VCS5 1084 aa13.69□□□□□ -0.22
CHKB-203ENST00000464225 ZNF530Q6P9A1 599 aaPredicted RBP13.69□□□□□ -0.22
CHKB-203ENST00000464225 AMIGO3Q86WK7 504 aa13.69□□□□□ -0.22
CHKB-203ENST00000464225 ATG3Q9NT62 314 aa13.69□□□□□ -0.22
CHKB-203ENST00000464225 HSP90AB1P08238 724 aaKnown RBP13.68□□□□□ -0.22
CHKB-203ENST00000464225 YY1P25490 414 aa13.68□□□□□ -0.22
CHKB-203ENST00000464225 MSL1Q68DK7 614 aa13.68□□□□□ -0.22
CHKB-203ENST00000464225 LINC00116Q8NCU8 138 aa13.68□□□□□ -0.22
CHKB-203ENST00000464225 DCAF5Q96JK2 942 aa13.68□□□□□ -0.22
CHKB-203ENST00000464225 AK7Q96M32 723 aa13.68□□□□□ -0.22
CHKB-203ENST00000464225 ERVV-2B6SEH9 535 aa13.67□□□□□ -0.22
CHKB-203ENST00000464225 ITPK1Q13572 414 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms