RNA–Protein interactions for RNA: ENST00000464051.1

SEMA4D-214, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 317 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-214ENST00000464051 NBPF4Q96M43 638 aa9.94□□□□□ -0.82
SEMA4D-214ENST00000464051 THRAP3Q9Y2W1 955 aaKnown RBP9.94□□□□□ -0.82
SEMA4D-214ENST00000464051 EP400Q96L91 3159 aa9.94□□□□□ -0.82
SEMA4D-214ENST00000464051 PKD1L3Q7Z443 1732 aa9.93□□□□□ -0.82
SEMA4D-214ENST00000464051 KDRP35968 1356 aa9.93□□□□□ -0.82
SEMA4D-214ENST00000464051 CSB-PGBD3P0DP91 1061 aa9.93□□□□□ -0.82
SEMA4D-214ENST00000464051 NLRP2Q9NX02 1062 aa9.93□□□□□ -0.82
SEMA4D-214ENST00000464051 RCAN3Q9UKA8 241 aa9.93□□□□□ -0.82
SEMA4D-214ENST00000464051 FAM98CQ17RN3 349 aaKnown RBP9.92□□□□□ -0.82
SEMA4D-214ENST00000464051 RUNDC1Q96C34 613 aa9.92□□□□□ -0.82
SEMA4D-214ENST00000464051 EYA1Q99502 592 aa9.92□□□□□ -0.82
SEMA4D-214ENST00000464051 USP35Q9P2H5 1018 aa9.92□□□□□ -0.82
SEMA4D-214ENST00000464051 CCDC9Q9Y3X0 531 aaKnown RBP9.92□□□□□ -0.82
SEMA4D-214ENST00000464051 OVOS2A0A0G2JMS6 1433 aa9.91□□□□□ -0.82
SEMA4D-214ENST00000464051 TNS2Q63HR2 1409 aa9.91□□□□□ -0.82
SEMA4D-214ENST00000464051 ILDR2Q71H61 639 aa9.91□□□□□ -0.82
SEMA4D-214ENST00000464051 SEPT12Q8IYM1 358 aa9.91□□□□□ -0.82
SEMA4D-214ENST00000464051 USHBP1Q8N6Y0 703 aa9.91□□□□□ -0.82
SEMA4D-214ENST00000464051 PLEKHG2Q9H7P9 1386 aa9.9□□□□□ -0.82
SEMA4D-214ENST00000464051 IRX6P78412 446 aaPredicted RBP9.9□□□□□ -0.82
SEMA4D-214ENST00000464051 NCBP3Q53F19 620 aaKnown RBP9.9□□□□□ -0.82
SEMA4D-214ENST00000464051 CDCA7Q9BWT1 371 aaPredicted RBP9.9□□□□□ -0.82
SEMA4D-214ENST00000464051 E9PSI1 815 aa9.89□□□□□ -0.83
SEMA4D-214ENST00000464051 DIAPH1O60610 1272 aaKnown RBP9.89□□□□□ -0.83
SEMA4D-214ENST00000464051 IL2RBP14784 551 aa9.89□□□□□ -0.83
SEMA4D-214ENST00000464051 AEBP1Q8IUX7 1158 aa9.89□□□□□ -0.83
SEMA4D-214ENST00000464051 APAF1O14727 1248 aa9.88□□□□□ -0.83
SEMA4D-214ENST00000464051 U2AF1L5P0DN76 240 aaPredicted RBP9.88□□□□□ -0.83
SEMA4D-214ENST00000464051 U2AF1Q01081 240 aaKnown RBP eCLIP9.88□□□□□ -0.83
SEMA4D-214ENST00000464051 CCDC146Q8IYE0 955 aa9.88□□□□□ -0.83
SEMA4D-214ENST00000464051 CCDC136Q96JN2 1154 aa9.88□□□□□ -0.83
SEMA4D-214ENST00000464051 SBF2Q86WG5 1849 aa9.88□□□□□ -0.83
SEMA4D-214ENST00000464051 RNF123Q5XPI4 1314 aa9.87□□□□□ -0.83
SEMA4D-214ENST00000464051 MAPK8IP3Q9UPT6 1336 aa9.87□□□□□ -0.83
SEMA4D-214ENST00000464051 U2SURPO15042 1029 aaKnown RBP9.87□□□□□ -0.83
SEMA4D-214ENST00000464051 RRP1P56182 461 aaKnown RBP9.87□□□□□ -0.83
SEMA4D-214ENST00000464051 BCL9O00512 1426 aa9.87□□□□□ -0.83
SEMA4D-214ENST00000464051 SENP3-EIF4A1A0A087X0R7 540 aa9.86□□□□□ -0.83
SEMA4D-214ENST00000464051 SULT6B1Q6IMI4 303 aa9.86□□□□□ -0.83
SEMA4D-214ENST00000464051 WDR63Q8IWG1 891 aa9.86□□□□□ -0.83
SEMA4D-214ENST00000464051 TOGARAM1Q9Y4F4 1720 aa9.86□□□□□ -0.83
SEMA4D-214ENST00000464051 VIRMAQ69YN4 1812 aaKnown RBP9.85□□□□□ -0.83
SEMA4D-214ENST00000464051 TATP17735 454 aaPredicted RBP9.85□□□□□ -0.83
SEMA4D-214ENST00000464051 SLFN5Q08AF3 891 aa9.85□□□□□ -0.83
SEMA4D-214ENST00000464051 DDB1Q16531 1140 aa9.85□□□□□ -0.83
SEMA4D-214ENST00000464051 KRT27Q7Z3Y8 459 aa9.85□□□□□ -0.83
SEMA4D-214ENST00000464051 MARCH10Q8NA82 808 aaPredicted RBP9.85□□□□□ -0.83
SEMA4D-214ENST00000464051 RAPGEF4Q8WZA2 1011 aa9.85□□□□□ -0.83
SEMA4D-214ENST00000464051 RSPH6AQ9H0K4 717 aa9.85□□□□□ -0.83
SEMA4D-214ENST00000464051 MYH16Q9H6N6 1097 aa9.85□□□□□ -0.83
SEMA4D-214ENST00000464051 DOT1LQ8TEK3 1739 aa9.85□□□□□ -0.83
SEMA4D-214ENST00000464051 TNS1Q9HBL0 1735 aaKnown RBP9.85□□□□□ -0.83
SEMA4D-214ENST00000464051 ADAMTS7Q9UKP4 1686 aa9.84□□□□□ -0.83
SEMA4D-214ENST00000464051 A0A0G2JS52 829 aa9.84□□□□□ -0.83
SEMA4D-214ENST00000464051 HMOX1P09601 288 aa9.84□□□□□ -0.83
SEMA4D-214ENST00000464051 MYT1Q01538 1121 aa9.84□□□□□ -0.83
SEMA4D-214ENST00000464051 CCDC27Q2M243 656 aa9.84□□□□□ -0.83
SEMA4D-214ENST00000464051 CDCA7LQ96GN5 454 aa9.84□□□□□ -0.83
SEMA4D-214ENST00000464051 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.84□□□□□ -0.83
SEMA4D-214ENST00000464051 NHSQ6T4R5 1651 aa9.83□□□□□ -0.84
SEMA4D-214ENST00000464051 EXOC5O00471 708 aa9.83□□□□□ -0.84
SEMA4D-214ENST00000464051 CYP27B1O15528 508 aa9.83□□□□□ -0.84
SEMA4D-214ENST00000464051 CALD1Q05682 793 aaKnown RBP9.83□□□□□ -0.84
SEMA4D-214ENST00000464051 NEUROD2Q15784 382 aa9.83□□□□□ -0.84
SEMA4D-214ENST00000464051 PCDH11XQ9BZA7 1347 aa9.82□□□□□ -0.84
SEMA4D-214ENST00000464051 PCDH11YQ9BZA8 1340 aa9.82□□□□□ -0.84
SEMA4D-214ENST00000464051 ITGB4P16144 1822 aa9.82□□□□□ -0.84
SEMA4D-214ENST00000464051 DLG5Q8TDM6 1919 aa9.82□□□□□ -0.84
SEMA4D-214ENST00000464051 FCHSD2O94868 740 aa9.82□□□□□ -0.84
SEMA4D-214ENST00000464051 CANXP27824 592 aaKnown RBP9.82□□□□□ -0.84
SEMA4D-214ENST00000464051 FAM182BQ5T319 152 aa9.82□□□□□ -0.84
SEMA4D-214ENST00000464051 ZCRB1Q8TBF4 217 aaKnown RBP9.82□□□□□ -0.84
SEMA4D-214ENST00000464051 SCN11AQ9UI33 1791 aa9.82□□□□□ -0.84
SEMA4D-214ENST00000464051 KAT6BQ8WYB5 2073 aa9.82□□□□□ -0.84
SEMA4D-214ENST00000464051 MS4A1P11836 297 aa9.81□□□□□ -0.84
SEMA4D-214ENST00000464051 PRKAR2BP31323 418 aa9.81□□□□□ -0.84
SEMA4D-214ENST00000464051 DUSP27Q5VZP5 1158 aa9.81□□□□□ -0.84
SEMA4D-214ENST00000464051 WWC1Q8IX03 1113 aa9.81□□□□□ -0.84
SEMA4D-214ENST00000464051 PLEKHF1Q96S99 279 aa9.81□□□□□ -0.84
SEMA4D-214ENST00000464051 KDM6AO15550 1401 aaPredicted RBP9.81□□□□□ -0.84
SEMA4D-214ENST00000464051 ZNF521Q96K83 1311 aa9.81□□□□□ -0.84
SEMA4D-214ENST00000464051 BTAF1O14981 1849 aa9.8□□□□□ -0.84
SEMA4D-214ENST00000464051 CT47B1P0C2W7 299 aaPredicted RBP9.8□□□□□ -0.84
SEMA4D-214ENST00000464051 PHKG2P15735 406 aa9.8□□□□□ -0.84
SEMA4D-214ENST00000464051 NKX1-1Q15270 411 aaPredicted RBP9.8□□□□□ -0.84
SEMA4D-214ENST00000464051 AMOTQ4VCS5 1084 aa9.8□□□□□ -0.84
SEMA4D-214ENST00000464051 PLEKHO1Q53GL0 409 aaPredicted RBP9.8□□□□□ -0.84
SEMA4D-214ENST00000464051 B4GALNT3Q6L9W6 998 aa9.8□□□□□ -0.84
SEMA4D-214ENST00000464051 FAM196AQ6ZSG2 479 aa9.8□□□□□ -0.84
SEMA4D-214ENST00000464051 PHACTR3Q96KR7 559 aa9.8□□□□□ -0.84
SEMA4D-214ENST00000464051 SPG7Q9UQ90 795 aa9.8□□□□□ -0.84
SEMA4D-214ENST00000464051 RGPD3A6NKT7 1758 aaPredicted RBP9.8□□□□□ -0.84
SEMA4D-214ENST00000464051 RGPD4Q7Z3J3 1758 aa9.8□□□□□ -0.84
SEMA4D-214ENST00000464051 MRC1P22897 1456 aa9.79□□□□□ -0.84
SEMA4D-214ENST00000464051 SIPA1L3O60292 1781 aaPredicted RBP9.79□□□□□ -0.84
SEMA4D-214ENST00000464051 LMOD3Q0VAK6 560 aa9.79□□□□□ -0.84
SEMA4D-214ENST00000464051 MTHFSDQ2M296 383 aaKnown RBP9.79□□□□□ -0.84
SEMA4D-214ENST00000464051 ZNF530Q6P9A1 599 aaPredicted RBP9.79□□□□□ -0.84
SEMA4D-214ENST00000464051 TRMT2AQ8IZ69 625 aaKnown RBP9.79□□□□□ -0.84
SEMA4D-214ENST00000464051 DDX54Q8TDD1 881 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms