RNA–Protein interactions for RNA: ENST00000463809.1

CCDC144A-211, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-211ENST00000463809 DOLKQ9UPQ8 538 aa13.16□□□□□ -0.3
CCDC144A-211ENST00000463809 PIK3CDO00329 1044 aa13.15□□□□□ -0.3
CCDC144A-211ENST00000463809 MAN1A2O60476 641 aa13.15□□□□□ -0.3
CCDC144A-211ENST00000463809 CTSOP43234 321 aaPredicted RBP13.15□□□□□ -0.3
CCDC144A-211ENST00000463809 CYP2U1Q7Z449 544 aa13.13□□□□□ -0.31
CCDC144A-211ENST00000463809 PLPP7Q8NBV4 271 aa13.13□□□□□ -0.31
CCDC144A-211ENST00000463809 MAP7D1Q3KQU3 841 aa13.12□□□□□ -0.31
CCDC144A-211ENST00000463809 HDGFL1Q5TGJ6 251 aa13.12□□□□□ -0.31
CCDC144A-211ENST00000463809 MYCP01106 439 aaPredicted RBP13.11□□□□□ -0.31
CCDC144A-211ENST00000463809 ESF1Q9H501 851 aaKnown RBP13.11□□□□□ -0.31
CCDC144A-211ENST00000463809 POLMQ9NP87 494 aaPredicted RBP13.11□□□□□ -0.31
CCDC144A-211ENST00000463809 GTF3C3Q9Y5Q9 886 aa13.11□□□□□ -0.31
CCDC144A-211ENST00000463809 FIGNL2A6NMB9 653 aa13.1□□□□□ -0.31
CCDC144A-211ENST00000463809 USP4Q13107 963 aa13.1□□□□□ -0.31
CCDC144A-211ENST00000463809 OXLD1Q5BKU9 147 aa13.1□□□□□ -0.31
CCDC144A-211ENST00000463809 FOXD4L5Q5VV16 416 aaPredicted RBP13.1□□□□□ -0.31
CCDC144A-211ENST00000463809 A0A1W2PRU2 124 aa13.09□□□□□ -0.31
CCDC144A-211ENST00000463809 RNF217Q8TC41 542 aa13.09□□□□□ -0.31
CCDC144A-211ENST00000463809 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.08□□□□□ -0.32
CCDC144A-211ENST00000463809 NFATC2IPQ8NCF5 419 aa13.08□□□□□ -0.32
CCDC144A-211ENST00000463809 NXF1Q9UBU9 619 aaKnown RBP13.08□□□□□ -0.32
CCDC144A-211ENST00000463809 TERTO14746 1132 aaKnown RBP13.07□□□□□ -0.32
CCDC144A-211ENST00000463809 SKIP12755 728 aa13.07□□□□□ -0.32
CCDC144A-211ENST00000463809 UCN2Q96RP3 112 aa13.07□□□□□ -0.32
CCDC144A-211ENST00000463809 ARHGEF10LQ9HCE6 1279 aa13.07□□□□□ -0.32
CCDC144A-211ENST00000463809 GNRH1P01148 92 aa13.06□□□□□ -0.32
CCDC144A-211ENST00000463809 NFX1Q12986 1120 aaKnown RBP13.06□□□□□ -0.32
CCDC144A-211ENST00000463809 CLN3Q13286 438 aa13.06□□□□□ -0.32
CCDC144A-211ENST00000463809 SIRT1Q96EB6 747 aa13.06□□□□□ -0.32
CCDC144A-211ENST00000463809 MEN1O00255 615 aa13.05□□□□□ -0.32
CCDC144A-211ENST00000463809 RNF144AP50876 292 aaPredicted RBP13.05□□□□□ -0.32
CCDC144A-211ENST00000463809 LCE2AQ5TA79 106 aaPredicted RBP13.05□□□□□ -0.32
CCDC144A-211ENST00000463809 TREML4Q6UXN2 200 aa13.05□□□□□ -0.32
CCDC144A-211ENST00000463809 GLMNQ92990 594 aa13.05□□□□□ -0.32
CCDC144A-211ENST00000463809 RAB6BQ9NRW1 208 aa13.04□□□□□ -0.32
CCDC144A-211ENST00000463809 NPAS3Q8IXF0 933 aa13.03□□□□□ -0.32
CCDC144A-211ENST00000463809 GPC1P35052 558 aa13.02□□□□□ -0.33
CCDC144A-211ENST00000463809 TBC1D9Q6ZT07 1266 aa13.02□□□□□ -0.33
CCDC144A-211ENST00000463809 USP17L5A8MUK1 530 aa13.01□□□□□ -0.33
CCDC144A-211ENST00000463809 WFS1O76024 890 aa13.01□□□□□ -0.33
CCDC144A-211ENST00000463809 IL2RAP01589 272 aa13.01□□□□□ -0.33
CCDC144A-211ENST00000463809 VEGFBP49765 207 aa13.01□□□□□ -0.33
CCDC144A-211ENST00000463809 PTSQ03393 145 aa13.01□□□□□ -0.33
CCDC144A-211ENST00000463809 NLRP3Q96P20 1036 aa13.01□□□□□ -0.33
CCDC144A-211ENST00000463809 LZTS3O60299 673 aaPredicted RBP13□□□□□ -0.33
CCDC144A-211ENST00000463809 STAU1O95793 577 aaKnown RBP13□□□□□ -0.33
CCDC144A-211ENST00000463809 NCOA4Q13772 614 aa13□□□□□ -0.33
CCDC144A-211ENST00000463809 EML3Q32P44 896 aa13□□□□□ -0.33
CCDC144A-211ENST00000463809 CNKSR1Q969H4 720 aa13□□□□□ -0.33
CCDC144A-211ENST00000463809 ESYT1Q9BSJ8 1104 aa13□□□□□ -0.33
CCDC144A-211ENST00000463809 H3BM21 787 aa12.99□□□□□ -0.33
CCDC144A-211ENST00000463809 LCE2CQ5TA81 110 aa12.99□□□□□ -0.33
CCDC144A-211ENST00000463809 LYSMD3Q7Z3D4 306 aa12.99□□□□□ -0.33
CCDC144A-211ENST00000463809 DEPDC4Q8N2C3 294 aa12.99□□□□□ -0.33
CCDC144A-211ENST00000463809 XAGE2Q96GT9 111 aa12.99□□□□□ -0.33
CCDC144A-211ENST00000463809 ETNK1Q9HBU6 452 aa12.99□□□□□ -0.33
CCDC144A-211ENST00000463809 HRH3Q9Y5N1 445 aa12.99□□□□□ -0.33
CCDC144A-211ENST00000463809 ATP9BO43861 1147 aa12.98□□□□□ -0.33
CCDC144A-211ENST00000463809 CALR3Q96L12 384 aaKnown RBP12.98□□□□□ -0.33
CCDC144A-211ENST00000463809 GRIP2Q9C0E4 1043 aa12.98□□□□□ -0.33
CCDC144A-211ENST00000463809 PPFIA3O75145 1194 aa12.97□□□□□ -0.33
CCDC144A-211ENST00000463809 PRICKLE2Q7Z3G6 844 aa12.97□□□□□ -0.33
CCDC144A-211ENST00000463809 PCDHGA11Q9Y5H2 935 aa12.97□□□□□ -0.33
CCDC144A-211ENST00000463809 SENP3-EIF4A1A0A087X0R7 540 aa12.96□□□□□ -0.33
CCDC144A-211ENST00000463809 SLC35F4A4IF30 521 aa12.96□□□□□ -0.33
CCDC144A-211ENST00000463809 SCNN1DP51172 638 aa12.96□□□□□ -0.33
CCDC144A-211ENST00000463809 ESCO1Q5FWF5 840 aa12.96□□□□□ -0.33
CCDC144A-211ENST00000463809 PLEKHM2Q8IWE5 1019 aa12.96□□□□□ -0.33
CCDC144A-211ENST00000463809 SLC16A10Q8TF71 515 aa12.96□□□□□ -0.33
CCDC144A-211ENST00000463809 ZMYND15Q9H091 742 aa12.96□□□□□ -0.33
CCDC144A-211ENST00000463809 ZNF777Q9ULD5 760 aaPredicted RBP12.96□□□□□ -0.33
CCDC144A-211ENST00000463809 NOD1Q9Y239 953 aa12.96□□□□□ -0.33
CCDC144A-211ENST00000463809 USP17L3A6NCW0 530 aa12.95□□□□□ -0.34
CCDC144A-211ENST00000463809 USP17L4A6NCW7 530 aa12.95□□□□□ -0.34
CCDC144A-211ENST00000463809 CENPCQ03188 943 aa12.95□□□□□ -0.34
CCDC144A-211ENST00000463809 SLC27A3Q5K4L6 730 aa12.95□□□□□ -0.34
CCDC144A-211ENST00000463809 USP17L2Q6R6M4 530 aa12.95□□□□□ -0.34
CCDC144A-211ENST00000463809 USP17L1Q7RTZ2 530 aa12.95□□□□□ -0.34
CCDC144A-211ENST00000463809 CCDC155Q8N6L0 562 aa12.94□□□□□ -0.34
CCDC144A-211ENST00000463809 FHDC1Q9C0D6 1143 aaPredicted RBP12.94□□□□□ -0.34
CCDC144A-211ENST00000463809 RHOQP17081 205 aa12.93□□□□□ -0.34
CCDC144A-211ENST00000463809 GDF10P55107 478 aa12.93□□□□□ -0.34
CCDC144A-211ENST00000463809 TFIP11Q9UBB9 837 aaKnown RBP12.93□□□□□ -0.34
CCDC144A-211ENST00000463809 INHAP05111 366 aa12.92□□□□□ -0.34
CCDC144A-211ENST00000463809 GTF2IP78347 998 aa12.92□□□□□ -0.34
CCDC144A-211ENST00000463809 ERBB4Q15303 1308 aa12.91□□□□□ -0.34
CCDC144A-211ENST00000463809 TMEM229AB2RXF0 380 aa12.91□□□□□ -0.34
CCDC144A-211ENST00000463809 SPATA31C2B4DYI2 1134 aa12.91□□□□□ -0.34
CCDC144A-211ENST00000463809 WASLO00401 505 aaPredicted RBP12.91□□□□□ -0.34
CCDC144A-211ENST00000463809 POU4F2Q12837 409 aa12.91□□□□□ -0.34
CCDC144A-211ENST00000463809 MAFBQ9Y5Q3 323 aaPredicted RBP12.91□□□□□ -0.34
CCDC144A-211ENST00000463809 PALM3A6NDB9 673 aaPredicted RBP12.9□□□□□ -0.34
CCDC144A-211ENST00000463809 IRF7Q92985 503 aa12.9□□□□□ -0.34
CCDC144A-211ENST00000463809 PPP1R12CQ9BZL4 782 aa12.9□□□□□ -0.34
CCDC144A-211ENST00000463809 VSIG8P0DPA2 414 aa12.89□□□□□ -0.35
CCDC144A-211ENST00000463809 NBPF10Q6P3W6 841 aaKnown RBP12.89□□□□□ -0.35
CCDC144A-211ENST00000463809 NBPF15Q8N660 670 aa12.89□□□□□ -0.35
CCDC144A-211ENST00000463809 ZSCAN10Q96SZ4 725 aaPredicted RBP12.89□□□□□ -0.35
CCDC144A-211ENST00000463809 TRIM50Q86XT4 487 aa12.88□□□□□ -0.35
CCDC144A-211ENST00000463809 ITGA6P23229 1130 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms