RNA–Protein interactions for RNA: ENST00000463098.5

RBM39-224, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-224ENST00000463098 NGEFQ8N5V2 710 aa19.65■□□□□ 0.74
RBM39-224ENST00000463098 TCP11L2Q8N4U5 519 aa19.64■□□□□ 0.73
RBM39-224ENST00000463098 THSD7AQ9UPZ6 1657 aa19.64■□□□□ 0.73
RBM39-224ENST00000463098 PHACTR3Q96KR7 559 aa19.63■□□□□ 0.73
RBM39-224ENST00000463098 CDCA7Q9BWT1 371 aaPredicted RBP19.63■□□□□ 0.73
RBM39-224ENST00000463098 MAPK8IP3Q9UPT6 1336 aa19.62■□□□□ 0.73
RBM39-224ENST00000463098 IL2RBP14784 551 aa19.62■□□□□ 0.73
RBM39-224ENST00000463098 CCDC146Q8IYE0 955 aa19.62■□□□□ 0.73
RBM39-224ENST00000463098 RAPGEF4Q8WZA2 1011 aa19.62■□□□□ 0.73
RBM39-224ENST00000463098 TRPC5Q9UL62 973 aaPredicted RBP19.62■□□□□ 0.73
RBM39-224ENST00000463098 SHANK3Q9BYB0 1731 aa19.62■□□□□ 0.73
RBM39-224ENST00000463098 AMOTQ4VCS5 1084 aa19.61■□□□□ 0.73
RBM39-224ENST00000463098 ADAMTS7Q9UKP4 1686 aa19.6■□□□□ 0.73
RBM39-224ENST00000463098 TATP17735 454 aaPredicted RBP19.6■□□□□ 0.73
RBM39-224ENST00000463098 CCDC27Q2M243 656 aa19.6■□□□□ 0.73
RBM39-224ENST00000463098 ZNF772Q68DY9 489 aaPredicted RBP19.6■□□□□ 0.73
RBM39-224ENST00000463098 TNS2Q63HR2 1409 aa19.59■□□□□ 0.73
RBM39-224ENST00000463098 LRRC37A3O60309 1634 aa19.59■□□□□ 0.73
RBM39-224ENST00000463098 APAF1O14727 1248 aa19.59■□□□□ 0.73
RBM39-224ENST00000463098 ONECUT3O60422 494 aaPredicted RBP19.59■□□□□ 0.73
RBM39-224ENST00000463098 NEFMP07197 916 aa19.59■□□□□ 0.73
RBM39-224ENST00000463098 TMPOP42166 694 aaKnown RBP19.59■□□□□ 0.73
RBM39-224ENST00000463098 NFE2L2Q16236 605 aa19.59■□□□□ 0.73
RBM39-224ENST00000463098 GAS2L2Q8NHY3 880 aa19.59■□□□□ 0.73
RBM39-224ENST00000463098 GJD4Q96KN9 370 aaPredicted RBP19.59■□□□□ 0.73
RBM39-224ENST00000463098 MTHFSDQ2M296 383 aaKnown RBP19.58■□□□□ 0.72
RBM39-224ENST00000463098 PLEKHO1Q53GL0 409 aaPredicted RBP19.58■□□□□ 0.72
RBM39-224ENST00000463098 ZNF521Q96K83 1311 aa19.57■□□□□ 0.72
RBM39-224ENST00000463098 QTRT2Q9H974 415 aaKnown RBP19.56■□□□□ 0.72
RBM39-224ENST00000463098 ZBED9Q6R2W3 1325 aa19.55■□□□□ 0.72
RBM39-224ENST00000463098 HTATSF1O43719 755 aaKnown RBP19.55■□□□□ 0.72
RBM39-224ENST00000463098 USP35Q9P2H5 1018 aa19.55■□□□□ 0.72
RBM39-224ENST00000463098 SPG7Q9UQ90 795 aa19.55■□□□□ 0.72
RBM39-224ENST00000463098 MAP3K5Q99683 1374 aa19.55■□□□□ 0.72
RBM39-224ENST00000463098 DLG5Q8TDM6 1919 aa19.55■□□□□ 0.72
RBM39-224ENST00000463098 PCDH11XQ9BZA7 1347 aa19.54■□□□□ 0.72
RBM39-224ENST00000463098 PCDH11YQ9BZA8 1340 aa19.54■□□□□ 0.72
RBM39-224ENST00000463098 AKAP4Q5JQC9 854 aa19.54■□□□□ 0.72
RBM39-224ENST00000463098 HNRNPUQ00839 825 aaKnown RBP eCLIP19.53■□□□□ 0.72
RBM39-224ENST00000463098 ZCRB1Q8TBF4 217 aaKnown RBP19.53■□□□□ 0.72
RBM39-224ENST00000463098 TRIM35Q9UPQ4 493 aa19.53■□□□□ 0.72
RBM39-224ENST00000463098 LMOD3Q0VAK6 560 aa19.52■□□□□ 0.72
RBM39-224ENST00000463098 CCDC9Q9Y3X0 531 aaKnown RBP19.52■□□□□ 0.72
RBM39-224ENST00000463098 CEMIPQ8WUJ3 1361 aa19.52■□□□□ 0.72
RBM39-224ENST00000463098 RGS12O14924 1447 aa19.51■□□□□ 0.71
RBM39-224ENST00000463098 CYP27B1O15528 508 aa19.51■□□□□ 0.71
RBM39-224ENST00000463098 PHKG2P15735 406 aa19.51■□□□□ 0.71
RBM39-224ENST00000463098 RIPK4P57078 832 aa19.51■□□□□ 0.71
RBM39-224ENST00000463098 RBM6P78332 1123 aaKnown RBP19.51■□□□□ 0.71
RBM39-224ENST00000463098 NKX1-1Q15270 411 aaPredicted RBP19.51■□□□□ 0.71
RBM39-224ENST00000463098 ZNF530Q6P9A1 599 aaPredicted RBP19.51■□□□□ 0.71
RBM39-224ENST00000463098 MRC1P22897 1456 aa19.51■□□□□ 0.71
RBM39-224ENST00000463098 GNAT3A8MTJ3 354 aa19.5■□□□□ 0.71
RBM39-224ENST00000463098 FAM98CQ17RN3 349 aaKnown RBP19.5■□□□□ 0.71
RBM39-224ENST00000463098 WWC1Q8IX03 1113 aa19.5■□□□□ 0.71
RBM39-224ENST00000463098 IFNL2Q8IZJ0 200 aa19.5■□□□□ 0.71
RBM39-224ENST00000463098 RRP7AQ9Y3A4 280 aaKnown RBP19.5■□□□□ 0.71
RBM39-224ENST00000463098 BCL9O00512 1426 aa19.5■□□□□ 0.71
RBM39-224ENST00000463098 KDM6AO15550 1401 aaPredicted RBP19.49■□□□□ 0.71
RBM39-224ENST00000463098 EXOC5O00471 708 aa19.48■□□□□ 0.71
RBM39-224ENST00000463098 RXRBP28702 533 aa19.48■□□□□ 0.71
RBM39-224ENST00000463098 DDB1Q16531 1140 aa19.48■□□□□ 0.71
RBM39-224ENST00000463098 SCN11AQ9UI33 1791 aa19.47■□□□□ 0.71
RBM39-224ENST00000463098 HSP90AB1P08238 724 aaKnown RBP19.47■□□□□ 0.71
RBM39-224ENST00000463098 C1orf141Q5JVX7 400 aa19.47■□□□□ 0.71
RBM39-224ENST00000463098 WDR63Q8IWG1 891 aa19.47■□□□□ 0.71
RBM39-224ENST00000463098 IL16Q14005 1332 aa19.47■□□□□ 0.71
RBM39-224ENST00000463098 BRWD3Q6RI45 1802 aa19.46■□□□□ 0.71
RBM39-224ENST00000463098 NEUROD2Q15784 382 aa19.45■□□□□ 0.7
RBM39-224ENST00000463098 IL17REQ8NFR9 667 aa19.45■□□□□ 0.7
RBM39-224ENST00000463098 DCAF5Q96JK2 942 aa19.45■□□□□ 0.7
RBM39-224ENST00000463098 TOGARAM1Q9Y4F4 1720 aa19.45■□□□□ 0.7
RBM39-224ENST00000463098 SIPA1L3O60292 1781 aaPredicted RBP19.44■□□□□ 0.7
RBM39-224ENST00000463098 PDE3BQ13370 1112 aa19.44■□□□□ 0.7
RBM39-224ENST00000463098 RNMTO43148 476 aaKnown RBP19.43■□□□□ 0.7
RBM39-224ENST00000463098 CALD1Q05682 793 aaKnown RBP19.43■□□□□ 0.7
RBM39-224ENST00000463098 SEPT12Q8IYM1 358 aa19.43■□□□□ 0.7
RBM39-224ENST00000463098 RTF1Q92541 710 aaKnown RBP19.43■□□□□ 0.7
RBM39-224ENST00000463098 VIRMAQ69YN4 1812 aaKnown RBP19.43■□□□□ 0.7
RBM39-224ENST00000463098 ZNF853P0CG23 659 aa19.42■□□□□ 0.7
RBM39-224ENST00000463098 MARCH10Q8NA82 808 aaPredicted RBP19.42■□□□□ 0.7
RBM39-224ENST00000463098 MCM10Q7L590 875 aa19.41■□□□□ 0.7
RBM39-224ENST00000463098 TRMT2AQ8IZ69 625 aaKnown RBP19.41■□□□□ 0.7
RBM39-224ENST00000463098 YTHDC1Q96MU7 727 aaKnown RBP19.41■□□□□ 0.7
RBM39-224ENST00000463098 BABAM1Q9NWV8 329 aa19.41■□□□□ 0.7
RBM39-224ENST00000463098 SENP3-EIF4A1A0A087X0R7 540 aa19.4■□□□□ 0.7
RBM39-224ENST00000463098 ERVV-2B6SEH9 535 aa19.4■□□□□ 0.7
RBM39-224ENST00000463098 GOLGA2Q08379 1002 aa19.4■□□□□ 0.7
RBM39-224ENST00000463098 DCTN1Q14203 1278 aa19.4■□□□□ 0.7
RBM39-224ENST00000463098 LGR6Q9HBX8 967 aa19.4■□□□□ 0.7
RBM39-224ENST00000463098 MPRIPQ6WCQ1 1025 aa19.39■□□□□ 0.69
RBM39-224ENST00000463098 DDX54Q8TDD1 881 aaKnown RBP19.39■□□□□ 0.69
RBM39-224ENST00000463098 IFT57Q9NWB7 429 aa19.39■□□□□ 0.69
RBM39-224ENST00000463098 SALL2Q9Y467 1007 aaPredicted RBP19.39■□□□□ 0.69
RBM39-224ENST00000463098 SLFN5Q08AF3 891 aa19.38■□□□□ 0.69
RBM39-224ENST00000463098 PAPPAQ13219 1627 aa19.38■□□□□ 0.69
RBM39-224ENST00000463098 DOT1LQ8TEK3 1739 aa19.38■□□□□ 0.69
RBM39-224ENST00000463098 CFAP44Q96MT7 982 aa19.38■□□□□ 0.69
RBM39-224ENST00000463098 THUMPD2Q9BTF0 503 aaKnown RBP19.38■□□□□ 0.69
RBM39-224ENST00000463098 KDM3BQ7LBC6 1761 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms