RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 SEPT3Q9UH03 358 aa9.08□□□□□ -0.96
COPS3-205ENST00000463097 DCTN4Q9UJW0 460 aa9.08□□□□□ -0.96
COPS3-205ENST00000463097 WEE1P30291 646 aa9.07□□□□□ -0.96
COPS3-205ENST00000463097 AGERQ15109 404 aa9.07□□□□□ -0.96
COPS3-205ENST00000463097 ECM1Q16610 540 aa9.07□□□□□ -0.96
COPS3-205ENST00000463097 WBP1LQ9NX94 342 aa9.07□□□□□ -0.96
COPS3-205ENST00000463097 DNMT3AQ9Y6K1 912 aaPredicted RBP9.07□□□□□ -0.96
COPS3-205ENST00000463097 ADH1BP00325 375 aa9.06□□□□□ -0.96
COPS3-205ENST00000463097 SF3B2Q13435 895 aaKnown RBP9.06□□□□□ -0.96
COPS3-205ENST00000463097 ZSCAN29Q8IWY8 852 aaPredicted RBP9.06□□□□□ -0.96
COPS3-205ENST00000463097 BAP1Q92560 729 aa9.06□□□□□ -0.96
COPS3-205ENST00000463097 SLC10A4Q96EP9 437 aa9.06□□□□□ -0.96
COPS3-205ENST00000463097 PCDHB11Q9Y5F2 797 aa9.06□□□□□ -0.96
COPS3-205ENST00000463097 ESPNB1AK53 854 aa9.05□□□□□ -0.96
COPS3-205ENST00000463097 M0R2N6 131 aa9.05□□□□□ -0.96
COPS3-205ENST00000463097 PTCD1O75127 700 aaKnown RBP9.05□□□□□ -0.96
COPS3-205ENST00000463097 TAGLNQ01995 201 aaKnown RBP9.05□□□□□ -0.96
COPS3-205ENST00000463097 CCDC125Q86Z20 511 aa9.05□□□□□ -0.96
COPS3-205ENST00000463097 FOXJ1Q92949 421 aa9.05□□□□□ -0.96
COPS3-205ENST00000463097 MKNK1Q9BUB5 465 aa9.05□□□□□ -0.96
COPS3-205ENST00000463097 TLL1O43897 1013 aa9.04□□□□□ -0.96
COPS3-205ENST00000463097 ARHGAP4P98171 946 aa9.04□□□□□ -0.96
COPS3-205ENST00000463097 FKBP5Q13451 457 aaPredicted RBP9.04□□□□□ -0.96
COPS3-205ENST00000463097 COL19A1Q14993 1142 aa9.04□□□□□ -0.96
COPS3-205ENST00000463097 NBPF20Q3BBV1 942 aa9.04□□□□□ -0.96
COPS3-205ENST00000463097 C4orf48Q5BLP8 95 aa9.04□□□□□ -0.96
COPS3-205ENST00000463097 TSEN2Q8NCE0 465 aaKnown RBP9.04□□□□□ -0.96
COPS3-205ENST00000463097 HS3ST6Q96QI5 342 aa9.04□□□□□ -0.96
COPS3-205ENST00000463097 POTEB3A0JP26 581 aa9.03□□□□□ -0.96
COPS3-205ENST00000463097 ZPR1O75312 459 aa9.03□□□□□ -0.96
COPS3-205ENST00000463097 MTMR3Q13615 1198 aa9.03□□□□□ -0.96
COPS3-205ENST00000463097 POTEBQ6S5H4 581 aa9.03□□□□□ -0.96
COPS3-205ENST00000463097 CAPN12Q6ZSI9 719 aa9.03□□□□□ -0.96
COPS3-205ENST00000463097 SEPT12Q8IYM1 358 aa9.03□□□□□ -0.96
COPS3-205ENST00000463097 ZNF511Q8NB15 262 aa9.03□□□□□ -0.96
COPS3-205ENST00000463097 PCDH10Q9P2E7 1040 aa9.03□□□□□ -0.96
COPS3-205ENST00000463097 LINC01559Q495D7 138 aa9.02□□□□□ -0.97
COPS3-205ENST00000463097 COL26A1Q96A83 441 aa9.02□□□□□ -0.97
COPS3-205ENST00000463097 BCL11AQ9H165 835 aa9.02□□□□□ -0.97
COPS3-205ENST00000463097 ANKRD13DQ6ZTN6 518 aa9.01□□□□□ -0.97
COPS3-205ENST00000463097 C8orf37Q96NL8 207 aa9.01□□□□□ -0.97
COPS3-205ENST00000463097 PURBQ96QR8 312 aaKnown RBP9.01□□□□□ -0.97
COPS3-205ENST00000463097 C1QTNF2Q9BXJ5 285 aa9.01□□□□□ -0.97
COPS3-205ENST00000463097 CDV3Q9UKY7 258 aaKnown RBP9.01□□□□□ -0.97
COPS3-205ENST00000463097 RECKO95980 971 aa9□□□□□ -0.97
COPS3-205ENST00000463097 MYCP01106 439 aaPredicted RBP9□□□□□ -0.97
COPS3-205ENST00000463097 EAPPQ56P03 285 aaPredicted RBP9□□□□□ -0.97
COPS3-205ENST00000463097 RGL4Q8IZJ4 473 aa9□□□□□ -0.97
COPS3-205ENST00000463097 SERBP1Q8NC51 408 aaKnown RBP eCLIP9□□□□□ -0.97
COPS3-205ENST00000463097 SLC6A16Q9GZN6 736 aa9□□□□□ -0.97
COPS3-205ENST00000463097 NAA30Q147X3 362 aaPredicted RBP8.99□□□□□ -0.97
COPS3-205ENST00000463097 TRMT44Q8IYL2 757 aaKnown RBP8.99□□□□□ -0.97
COPS3-205ENST00000463097 HELQQ8TDG4 1101 aa8.99□□□□□ -0.97
COPS3-205ENST00000463097 ZNF358Q9NW07 568 aa8.99□□□□□ -0.97
COPS3-205ENST00000463097 IGFBP4P22692 258 aa8.98□□□□□ -0.97
COPS3-205ENST00000463097 GAS2L2Q8NHY3 880 aa8.98□□□□□ -0.97
COPS3-205ENST00000463097 FOXO3O43524 673 aa8.97□□□□□ -0.97
COPS3-205ENST00000463097 FAM13AO94988 1023 aa8.97□□□□□ -0.97
COPS3-205ENST00000463097 NPR3P17342 541 aa8.97□□□□□ -0.97
COPS3-205ENST00000463097 DRC1Q96MC2 740 aa8.97□□□□□ -0.97
COPS3-205ENST00000463097 ZC3H6P61129 1189 aaKnown RBP8.96□□□□□ -0.98
COPS3-205ENST00000463097 TSNAXIP1Q2TAA8 658 aa8.96□□□□□ -0.98
COPS3-205ENST00000463097 MTRQ99707 1265 aa8.96□□□□□ -0.98
COPS3-205ENST00000463097 RBCK1Q9BYM8 510 aa8.96□□□□□ -0.98
COPS3-205ENST00000463097 RAB15P59190 212 aa8.95□□□□□ -0.98
COPS3-205ENST00000463097 SH3BP2P78314 561 aa8.95□□□□□ -0.98
COPS3-205ENST00000463097 THSD4Q6ZMP0 1018 aa8.95□□□□□ -0.98
COPS3-205ENST00000463097 NYAP1Q6ZVC0 841 aa8.95□□□□□ -0.98
COPS3-205ENST00000463097 SREK1Q8WXA9 508 aaKnown RBP8.95□□□□□ -0.98
COPS3-205ENST00000463097 KCTD15Q96SI1 283 aaPredicted RBP8.95□□□□□ -0.98
COPS3-205ENST00000463097 TMEM229AB2RXF0 380 aa8.94□□□□□ -0.98
COPS3-205ENST00000463097 SCTRP47872 440 aa8.94□□□□□ -0.98
COPS3-205ENST00000463097 TMC7Q7Z402 723 aa8.94□□□□□ -0.98
COPS3-205ENST00000463097 SCG3Q8WXD2 468 aaKnown RBP8.94□□□□□ -0.98
COPS3-205ENST00000463097 ESF1Q9H501 851 aaKnown RBP8.94□□□□□ -0.98
COPS3-205ENST00000463097 FCF1Q9Y324 198 aaKnown RBP8.94□□□□□ -0.98
COPS3-205ENST00000463097 BACH1O14867 736 aa8.93□□□□□ -0.98
COPS3-205ENST00000463097 P4HBP07237 508 aaKnown RBP8.93□□□□□ -0.98
COPS3-205ENST00000463097 BACH2Q9BYV9 841 aa8.93□□□□□ -0.98
COPS3-205ENST00000463097 IL21Q9HBE4 155 aa8.93□□□□□ -0.98
COPS3-205ENST00000463097 ATAD2Q6PL18 1390 aa8.92□□□□□ -0.98
COPS3-205ENST00000463097 ERVH48-1M5A8F1 160 aa8.92□□□□□ -0.98
COPS3-205ENST00000463097 NDUFB5O43674 189 aa8.92□□□□□ -0.98
COPS3-205ENST00000463097 HMGB1P09429 215 aaKnown RBP8.92□□□□□ -0.98
COPS3-205ENST00000463097 TNS4Q8IZW8 715 aa8.92□□□□□ -0.98
COPS3-205ENST00000463097 ZNF516Q92618 1163 aa8.92□□□□□ -0.98
COPS3-205ENST00000463097 VTI1AQ96AJ9 217 aa8.92□□□□□ -0.98
COPS3-205ENST00000463097 S1PR4O95977 384 aa8.91□□□□□ -0.98
COPS3-205ENST00000463097 MPSTP25325 297 aa8.91□□□□□ -0.98
COPS3-205ENST00000463097 SCNN1DP51172 638 aa8.91□□□□□ -0.98
COPS3-205ENST00000463097 ERVK-9P63128 1117 aa8.91□□□□□ -0.98
COPS3-205ENST00000463097 MRPL58Q14197 206 aaKnown RBP8.91□□□□□ -0.98
COPS3-205ENST00000463097 INTS6LQ5JSJ4 861 aaKnown RBP8.91□□□□□ -0.98
COPS3-205ENST00000463097 TJAP1Q5JTD0 557 aa8.91□□□□□ -0.98
COPS3-205ENST00000463097 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.91□□□□□ -0.98
COPS3-205ENST00000463097 BRPF3Q9ULD4 1205 aa8.91□□□□□ -0.98
COPS3-205ENST00000463097 WASLO00401 505 aaPredicted RBP8.9□□□□□ -0.98
COPS3-205ENST00000463097 TREHO43280 583 aa8.9□□□□□ -0.98
COPS3-205ENST00000463097 GDF10P55107 478 aa8.9□□□□□ -0.98
COPS3-205ENST00000463097 NAALADL2Q58DX5 795 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms