RNA–Protein interactions for RNA: ENST00000462260.1

PCOLCE-203, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 554 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-203ENST00000462260 USHBP1Q8N6Y0 703 aa18.91■□□□□ 0.62
PCOLCE-203ENST00000462260 ZCRB1Q8TBF4 217 aaKnown RBP18.91■□□□□ 0.62
PCOLCE-203ENST00000462260 ANO8Q9HCE9 1232 aaPredicted RBP18.9■□□□□ 0.62
PCOLCE-203ENST00000462260 BTAF1O14981 1849 aa18.89■□□□□ 0.61
PCOLCE-203ENST00000462260 POLKQ9UBT6 870 aa18.89■□□□□ 0.61
PCOLCE-203ENST00000462260 WASHC2AQ641Q2 1341 aa18.89■□□□□ 0.61
PCOLCE-203ENST00000462260 PPM1GO15355 546 aaPredicted RBP18.88■□□□□ 0.61
PCOLCE-203ENST00000462260 RAPGEF4Q8WZA2 1011 aa18.88■□□□□ 0.61
PCOLCE-203ENST00000462260 NSD2O96028 1365 aa18.87■□□□□ 0.61
PCOLCE-203ENST00000462260 NCAPD2Q15021 1401 aa18.87■□□□□ 0.61
PCOLCE-203ENST00000462260 TATP17735 454 aaPredicted RBP18.86■□□□□ 0.61
PCOLCE-203ENST00000462260 KIF7Q2M1P5 1343 aa18.84■□□□□ 0.61
PCOLCE-203ENST00000462260 DOT1LQ8TEK3 1739 aa18.84■□□□□ 0.61
PCOLCE-203ENST00000462260 TNNT2P45379 298 aaPredicted RBP18.84■□□□□ 0.61
PCOLCE-203ENST00000462260 PRIM1P49642 420 aaKnown RBP18.83■□□□□ 0.6
PCOLCE-203ENST00000462260 CASZ1Q86V15 1759 aa18.83■□□□□ 0.6
PCOLCE-203ENST00000462260 SLC15A2Q16348 729 aa18.82■□□□□ 0.6
PCOLCE-203ENST00000462260 EYA1Q99502 592 aa18.82■□□□□ 0.6
PCOLCE-203ENST00000462260 PAPPAQ13219 1627 aa18.82■□□□□ 0.6
PCOLCE-203ENST00000462260 PCDH11XQ9BZA7 1347 aa18.81■□□□□ 0.6
PCOLCE-203ENST00000462260 PCDH11YQ9BZA8 1340 aa18.81■□□□□ 0.6
PCOLCE-203ENST00000462260 SYTL4Q96C24 671 aaPredicted RBP18.81■□□□□ 0.6
PCOLCE-203ENST00000462260 LRRC4BQ9NT99 713 aa18.81■□□□□ 0.6
PCOLCE-203ENST00000462260 STK32BQ9NY57 414 aa18.81■□□□□ 0.6
PCOLCE-203ENST00000462260 KNSTRNQ9Y448 316 aa18.81■□□□□ 0.6
PCOLCE-203ENST00000462260 PKD1L3Q7Z443 1732 aa18.8■□□□□ 0.6
PCOLCE-203ENST00000462260 EIF4A2Q14240 407 aaKnown RBP18.8■□□□□ 0.6
PCOLCE-203ENST00000462260 SPON1Q9HCB6 807 aa18.8■□□□□ 0.6
PCOLCE-203ENST00000462260 CYP27B1O15528 508 aa18.79■□□□□ 0.6
PCOLCE-203ENST00000462260 MORC1Q86VD1 984 aa18.79■□□□□ 0.6
PCOLCE-203ENST00000462260 PDGFDQ9GZP0 370 aaPredicted RBP18.79■□□□□ 0.6
PCOLCE-203ENST00000462260 AMER1Q5JTC6 1135 aaPredicted RBP18.78■□□□□ 0.6
PCOLCE-203ENST00000462260 SLC27A3Q5K4L6 730 aa18.78■□□□□ 0.6
PCOLCE-203ENST00000462260 LY75O60449 1722 aa18.77■□□□□ 0.6
PCOLCE-203ENST00000462260 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.76■□□□□ 0.59
PCOLCE-203ENST00000462260 PER1O15534 1290 aaPredicted RBP18.75■□□□□ 0.59
PCOLCE-203ENST00000462260 ZNF827Q17R98 1081 aa18.75■□□□□ 0.59
PCOLCE-203ENST00000462260 SPG7Q9UQ90 795 aa18.75■□□□□ 0.59
PCOLCE-203ENST00000462260 PLEKHG2Q9H7P9 1386 aa18.75■□□□□ 0.59
PCOLCE-203ENST00000462260 IGSF1Q8N6C5 1336 aa18.74■□□□□ 0.59
PCOLCE-203ENST00000462260 NKX1-1Q15270 411 aaPredicted RBP18.74■□□□□ 0.59
PCOLCE-203ENST00000462260 TOGARAM1Q9Y4F4 1720 aa18.74■□□□□ 0.59
PCOLCE-203ENST00000462260 ZBTB7AO95365 584 aa18.73■□□□□ 0.59
PCOLCE-203ENST00000462260 AKT1S1Q96B36 256 aa18.73■□□□□ 0.59
PCOLCE-203ENST00000462260 KCNQ4P56696 695 aa18.71■□□□□ 0.59
PCOLCE-203ENST00000462260 PPP1R1BQ9UD71 204 aaPredicted RBP18.71■□□□□ 0.59
PCOLCE-203ENST00000462260 ITGB4P16144 1822 aa18.71■□□□□ 0.59
PCOLCE-203ENST00000462260 PTGER2P43116 358 aa18.7■□□□□ 0.58
PCOLCE-203ENST00000462260 QSER1Q2KHR3 1735 aa18.7■□□□□ 0.58
PCOLCE-203ENST00000462260 MPRIPQ6WCQ1 1025 aa18.7■□□□□ 0.58
PCOLCE-203ENST00000462260 MTFR1LQ9H019 292 aa18.7■□□□□ 0.58
PCOLCE-203ENST00000462260 CCNL1Q9UK58 526 aaPredicted RBP18.7■□□□□ 0.58
PCOLCE-203ENST00000462260 ATF5Q9Y2D1 282 aaPredicted RBP18.7■□□□□ 0.58
PCOLCE-203ENST00000462260 PHKG2P15735 406 aa18.69■□□□□ 0.58
PCOLCE-203ENST00000462260 IFNL2Q8IZJ0 200 aa18.69■□□□□ 0.58
PCOLCE-203ENST00000462260 SGIP1Q9BQI5 828 aa18.68■□□□□ 0.58
PCOLCE-203ENST00000462260 PALLDQ8WX93 1383 aa18.68■□□□□ 0.58
PCOLCE-203ENST00000462260 PIGBQ92521 554 aa18.67■□□□□ 0.58
PCOLCE-203ENST00000462260 NPC1L1Q9UHC9 1359 aa18.67■□□□□ 0.58
PCOLCE-203ENST00000462260 TUBGCP6Q96RT7 1819 aa18.66■□□□□ 0.58
PCOLCE-203ENST00000462260 IL13P35225 146 aa18.66■□□□□ 0.58
PCOLCE-203ENST00000462260 TFCP2L1Q9NZI6 479 aa18.66■□□□□ 0.58
PCOLCE-203ENST00000462260 PNPLA7Q6ZV29 1317 aa18.66■□□□□ 0.58
PCOLCE-203ENST00000462260 MTHFSP49914 203 aa18.65■□□□□ 0.58
PCOLCE-203ENST00000462260 CC2D1BQ5T0F9 858 aaKnown RBP18.65■□□□□ 0.58
PCOLCE-203ENST00000462260 AEBP1Q8IUX7 1158 aa18.65■□□□□ 0.58
PCOLCE-203ENST00000462260 SLC16A10Q8TF71 515 aa18.65■□□□□ 0.58
PCOLCE-203ENST00000462260 SMARCC1Q92922 1105 aaPredicted RBP18.65■□□□□ 0.58
PCOLCE-203ENST00000462260 KDRP35968 1356 aa18.65■□□□□ 0.58
PCOLCE-203ENST00000462260 AMOTQ4VCS5 1084 aa18.64■□□□□ 0.57
PCOLCE-203ENST00000462260 PLEKHO1Q53GL0 409 aaPredicted RBP18.64■□□□□ 0.57
PCOLCE-203ENST00000462260 C5P01031 1676 aa18.63■□□□□ 0.57
PCOLCE-203ENST00000462260 TAF1LQ8IZX4 1826 aa18.63■□□□□ 0.57
PCOLCE-203ENST00000462260 HMGB2P26583 209 aaKnown RBP18.63■□□□□ 0.57
PCOLCE-203ENST00000462260 SULT6B1Q6IMI4 303 aa18.63■□□□□ 0.57
PCOLCE-203ENST00000462260 TMOD3Q9NYL9 352 aa18.63■□□□□ 0.57
PCOLCE-203ENST00000462260 HSP90AB1P08238 724 aaKnown RBP18.61■□□□□ 0.57
PCOLCE-203ENST00000462260 COL24A1Q17RW2 1714 aa18.6■□□□□ 0.57
PCOLCE-203ENST00000462260 ERVV-2B6SEH9 535 aa18.6■□□□□ 0.57
PCOLCE-203ENST00000462260 ZNF530Q6P9A1 599 aaPredicted RBP18.6■□□□□ 0.57
PCOLCE-203ENST00000462260 DCAF5Q96JK2 942 aa18.6■□□□□ 0.57
PCOLCE-203ENST00000462260 ASAP1Q9ULH1 1129 aa18.6■□□□□ 0.57
PCOLCE-203ENST00000462260 KDM6AO15550 1401 aaPredicted RBP18.58■□□□□ 0.57
PCOLCE-203ENST00000462260 C4BP0C0L5 1744 aa18.58■□□□□ 0.57
PCOLCE-203ENST00000462260 LOC102724428A0A0B4J2F2 783 aa18.58■□□□□ 0.56
PCOLCE-203ENST00000462260 SIK1P57059 783 aa18.58■□□□□ 0.56
PCOLCE-203ENST00000462260 COL23A1Q86Y22 540 aaPredicted RBP18.58■□□□□ 0.56
PCOLCE-203ENST00000462260 ARXQ96QS3 562 aa18.58■□□□□ 0.56
PCOLCE-203ENST00000462260 FHDC1Q9C0D6 1143 aaPredicted RBP18.58■□□□□ 0.56
PCOLCE-203ENST00000462260 ATG3Q9NT62 314 aa18.58■□□□□ 0.56
PCOLCE-203ENST00000462260 DIAPH1O60610 1272 aaKnown RBP18.57■□□□□ 0.56
PCOLCE-203ENST00000462260 SYT17Q9BSW7 474 aa18.57■□□□□ 0.56
PCOLCE-203ENST00000462260 C1orf141Q5JVX7 400 aa18.56■□□□□ 0.56
PCOLCE-203ENST00000462260 MAP3K5Q99683 1374 aa18.55■□□□□ 0.56
PCOLCE-203ENST00000462260 COL3A1P02461 1466 aaPredicted RBP18.55■□□□□ 0.56
PCOLCE-203ENST00000462260 CNGB1Q14028 1251 aaPredicted RBP18.55■□□□□ 0.56
PCOLCE-203ENST00000462260 FLAD1Q8NFF5 587 aa18.55■□□□□ 0.56
PCOLCE-203ENST00000462260 HMOX1P09601 288 aa18.54■□□□□ 0.56
PCOLCE-203ENST00000462260 POLD1P28340 1107 aa18.54■□□□□ 0.56
PCOLCE-203ENST00000462260 ITPK1Q13572 414 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms