RNA–Protein interactions for RNA: ENST00000461830.6

RFWD2-206, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 5

Gene RFWD2, Length 2,131 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-206ENST00000461830 NBPF4Q96M43 638 aa9.79□□□□□ -0.84
RFWD2-206ENST00000461830 RGPD2P0DJD1 1756 aa9.78□□□□□ -0.84
RFWD2-206ENST00000461830 EIF4A2Q14240 407 aaKnown RBP9.78□□□□□ -0.84
RFWD2-206ENST00000461830 FBXO3Q9UK99 471 aa9.78□□□□□ -0.84
RFWD2-206ENST00000461830 CNKSR2Q8WXI2 1034 aa9.77□□□□□ -0.85
RFWD2-206ENST00000461830 PARD3Q8TEW0 1356 aa9.76□□□□□ -0.85
RFWD2-206ENST00000461830 EXOC5O00471 708 aa9.76□□□□□ -0.85
RFWD2-206ENST00000461830 PPP2R1AP30153 589 aa9.76□□□□□ -0.85
RFWD2-206ENST00000461830 RAPGEF4Q8WZA2 1011 aa9.76□□□□□ -0.85
RFWD2-206ENST00000461830 TNS2Q63HR2 1409 aa9.76□□□□□ -0.85
RFWD2-206ENST00000461830 FAM182BQ5T319 152 aa9.76□□□□□ -0.85
RFWD2-206ENST00000461830 CFAP53Q96M91 514 aa9.76□□□□□ -0.85
RFWD2-206ENST00000461830 EYA1Q99502 592 aa9.76□□□□□ -0.85
RFWD2-206ENST00000461830 MEGF6O75095 1541 aa9.75□□□□□ -0.85
RFWD2-206ENST00000461830 DIAPH1O60610 1272 aaKnown RBP9.75□□□□□ -0.85
RFWD2-206ENST00000461830 TATP17735 454 aaPredicted RBP9.75□□□□□ -0.85
RFWD2-206ENST00000461830 RALBP1Q15311 655 aa9.75□□□□□ -0.85
RFWD2-206ENST00000461830 IL13P35225 146 aa9.74□□□□□ -0.85
RFWD2-206ENST00000461830 OVOS2A0A0G2JMS6 1433 aa9.74□□□□□ -0.85
RFWD2-206ENST00000461830 NCAPD2Q15021 1401 aa9.74□□□□□ -0.85
RFWD2-206ENST00000461830 IGSF1Q8N6C5 1336 aa9.74□□□□□ -0.85
RFWD2-206ENST00000461830 FAM196AQ6ZSG2 479 aa9.74□□□□□ -0.85
RFWD2-206ENST00000461830 UPF1Q92900 1129 aaKnown RBP eCLIP9.74□□□□□ -0.85
RFWD2-206ENST00000461830 COL3A1P02461 1466 aaPredicted RBP9.73□□□□□ -0.85
RFWD2-206ENST00000461830 MARCH10Q8NA82 808 aaPredicted RBP9.73□□□□□ -0.85
RFWD2-206ENST00000461830 ZCRB1Q8TBF4 217 aaKnown RBP9.73□□□□□ -0.85
RFWD2-206ENST00000461830 RGPD1P0DJD0 1748 aa9.73□□□□□ -0.85
RFWD2-206ENST00000461830 U2SURPO15042 1029 aaKnown RBP9.72□□□□□ -0.85
RFWD2-206ENST00000461830 FKBP8Q14318 412 aa9.72□□□□□ -0.85
RFWD2-206ENST00000461830 SULT6B1Q6IMI4 303 aa9.72□□□□□ -0.85
RFWD2-206ENST00000461830 DDX54Q8TDD1 881 aaKnown RBP9.72□□□□□ -0.85
RFWD2-206ENST00000461830 MYBBP1AQ9BQG0 1328 aaKnown RBP9.72□□□□□ -0.85
RFWD2-206ENST00000461830 SF3B2Q13435 895 aaKnown RBP9.71□□□□□ -0.85
RFWD2-206ENST00000461830 CCDC125Q86Z20 511 aa9.71□□□□□ -0.86
RFWD2-206ENST00000461830 AEBP1Q8IUX7 1158 aa9.71□□□□□ -0.86
RFWD2-206ENST00000461830 PRKRIP1Q9H875 184 aaPredicted RBP9.71□□□□□ -0.86
RFWD2-206ENST00000461830 SPG7Q9UQ90 795 aa9.71□□□□□ -0.86
RFWD2-206ENST00000461830 NUDCQ9Y266 331 aa9.71□□□□□ -0.86
RFWD2-206ENST00000461830 PCDH11XQ9BZA7 1347 aa9.71□□□□□ -0.86
RFWD2-206ENST00000461830 PCDH11YQ9BZA8 1340 aa9.71□□□□□ -0.86
RFWD2-206ENST00000461830 SHANK3Q9BYB0 1731 aa9.7□□□□□ -0.86
RFWD2-206ENST00000461830 KDRP35968 1356 aa9.7□□□□□ -0.86
RFWD2-206ENST00000461830 HMOX1P09601 288 aa9.7□□□□□ -0.86
RFWD2-206ENST00000461830 PKD1L3Q7Z443 1732 aa9.7□□□□□ -0.86
RFWD2-206ENST00000461830 TRIM37O94972 964 aa9.7□□□□□ -0.86
RFWD2-206ENST00000461830 PLEKHG2Q9H7P9 1386 aa9.69□□□□□ -0.86
RFWD2-206ENST00000461830 BCL9O00512 1426 aa9.69□□□□□ -0.86
RFWD2-206ENST00000461830 ANP32CO43423 234 aa9.68□□□□□ -0.86
RFWD2-206ENST00000461830 PLEKHO1Q53GL0 409 aaPredicted RBP9.68□□□□□ -0.86
RFWD2-206ENST00000461830 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.68□□□□□ -0.862e-6■■□□□ 13.6
RFWD2-206ENST00000461830 U2AF1L5P0DN76 240 aaPredicted RBP9.68□□□□□ -0.86
RFWD2-206ENST00000461830 U2AF1Q01081 240 aaKnown RBP eCLIP9.68□□□□□ -0.86
RFWD2-206ENST00000461830 AMOTQ4VCS5 1084 aa9.68□□□□□ -0.86
RFWD2-206ENST00000461830 ACSBG1Q96GR2 724 aa9.68□□□□□ -0.86
RFWD2-206ENST00000461830 TNS1Q9HBL0 1735 aaKnown RBP9.68□□□□□ -0.86
RFWD2-206ENST00000461830 BAG6P46379 1132 aa9.67□□□□□ -0.86
RFWD2-206ENST00000461830 EP400Q96L91 3159 aa9.67□□□□□ -0.86
RFWD2-206ENST00000461830 CYP27B1O15528 508 aa9.67□□□□□ -0.86
RFWD2-206ENST00000461830 IFNL2Q8IZJ0 200 aa9.67□□□□□ -0.86
RFWD2-206ENST00000461830 NHSQ6T4R5 1651 aa9.66□□□□□ -0.86
RFWD2-206ENST00000461830 DOT1LQ8TEK3 1739 aa9.66□□□□□ -0.86
RFWD2-206ENST00000461830 SBF2Q86WG5 1849 aa9.66□□□□□ -0.86
RFWD2-206ENST00000461830 APBA3O96018 575 aa9.66□□□□□ -0.86
RFWD2-206ENST00000461830 ZNF530Q6P9A1 599 aaPredicted RBP9.66□□□□□ -0.86
RFWD2-206ENST00000461830 SYTL4Q96C24 671 aaPredicted RBP9.66□□□□□ -0.86
RFWD2-206ENST00000461830 BCL11BQ9C0K0 894 aaPredicted RBP9.66□□□□□ -0.86
RFWD2-206ENST00000461830 PHKG2P15735 406 aa9.65□□□□□ -0.86
RFWD2-206ENST00000461830 C1orf141Q5JVX7 400 aa9.65□□□□□ -0.86
RFWD2-206ENST00000461830 DEFB132Q7Z7B7 95 aa9.65□□□□□ -0.86
RFWD2-206ENST00000461830 KCNQ2O43526 872 aa9.65□□□□□ -0.86
RFWD2-206ENST00000461830 NPM3O75607 178 aaKnown RBP9.65□□□□□ -0.86
RFWD2-206ENST00000461830 PRKAR2BP31323 418 aa9.65□□□□□ -0.86
RFWD2-206ENST00000461830 RSPH6AQ9H0K4 717 aa9.65□□□□□ -0.86
RFWD2-206ENST00000461830 HSP90AB1P08238 724 aaKnown RBP9.64□□□□□ -0.87
RFWD2-206ENST00000461830 PTF1AQ7RTS3 328 aa9.64□□□□□ -0.87
RFWD2-206ENST00000461830 FCHSD2O94868 740 aa9.64□□□□□ -0.87
RFWD2-206ENST00000461830 NEFMP07197 916 aa9.64□□□□□ -0.87
RFWD2-206ENST00000461830 PRIM1P49642 420 aaKnown RBP9.64□□□□□ -0.87
RFWD2-206ENST00000461830 EN1Q05925 392 aaPredicted RBP9.64□□□□□ -0.87
RFWD2-206ENST00000461830 NKX1-1Q15270 411 aaPredicted RBP9.64□□□□□ -0.87
RFWD2-206ENST00000461830 WDR43Q15061 677 aaKnown RBP eCLIP9.63□□□□□ -0.87
RFWD2-206ENST00000461830 MTHFSDQ2M296 383 aaKnown RBP9.63□□□□□ -0.87
RFWD2-206ENST00000461830 TOGARAM1Q9Y4F4 1720 aa9.63□□□□□ -0.87
RFWD2-206ENST00000461830 AKAP4Q5JQC9 854 aa9.62□□□□□ -0.87
RFWD2-206ENST00000461830 GAS2L2Q8NHY3 880 aa9.62□□□□□ -0.87
RFWD2-206ENST00000461830 DCAF5Q96JK2 942 aa9.62□□□□□ -0.87
RFWD2-206ENST00000461830 PNNQ9H307 717 aaKnown RBP9.62□□□□□ -0.87
RFWD2-206ENST00000461830 EZH2Q15910 746 aaKnown RBP9.62□□□□□ -0.87
RFWD2-206ENST00000461830 MPRIPQ6WCQ1 1025 aa9.62□□□□□ -0.87
RFWD2-206ENST00000461830 BTAF1O14981 1849 aa9.62□□□□□ -0.87
RFWD2-206ENST00000461830 KDM6AO15550 1401 aaPredicted RBP9.61□□□□□ -0.87
RFWD2-206ENST00000461830 MAPK8IP3Q9UPT6 1336 aa9.61□□□□□ -0.87
RFWD2-206ENST00000461830 PLSCR1O15162 318 aa9.61□□□□□ -0.87
RFWD2-206ENST00000461830 TMOD3Q9NYL9 352 aa9.61□□□□□ -0.87
RFWD2-206ENST00000461830 RGPD3A6NKT7 1758 aaPredicted RBP9.61□□□□□ -0.87
RFWD2-206ENST00000461830 RGPD4Q7Z3J3 1758 aa9.61□□□□□ -0.87
RFWD2-206ENST00000461830 PHACTR3Q96KR7 559 aa9.61□□□□□ -0.87
RFWD2-206ENST00000461830 CAMKK2Q96RR4 588 aa9.61□□□□□ -0.87
RFWD2-206ENST00000461830 MAP3K5Q99683 1374 aa9.6□□□□□ -0.87
RFWD2-206ENST00000461830 MRS2Q9HD23 443 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms