RNA–Protein interactions for RNA: ENST00000461648.2

TSC2-208, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 1,071 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-208ENST00000461648 KRT27Q7Z3Y8 459 aa34.09■■■■□ 3.05
TSC2-208ENST00000461648 U2AF1L5P0DN76 240 aaPredicted RBP34.08■■■■□ 3.05
TSC2-208ENST00000461648 U2AF1Q01081 240 aaKnown RBP eCLIP34.08■■■■□ 3.05
TSC2-208ENST00000461648 PDE3BQ13370 1112 aa34.08■■■■□ 3.05
TSC2-208ENST00000461648 PKD1L3Q7Z443 1732 aa34.07■■■■□ 3.04
TSC2-208ENST00000461648 SHANK3Q9BYB0 1731 aa34.05■■■■□ 3.04
TSC2-208ENST00000461648 CCDC184Q52MB2 194 aa34.05■■■■□ 3.04
TSC2-208ENST00000461648 ZCRB1Q8TBF4 217 aaKnown RBP34.05■■■■□ 3.04
TSC2-208ENST00000461648 PLEKHG2Q9H7P9 1386 aa34.05■■■■□ 3.04
TSC2-208ENST00000461648 MRS2Q9HD23 443 aa34.01■■■■□ 3.03
TSC2-208ENST00000461648 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.01■■■■□ 3.03
TSC2-208ENST00000461648 RSPH6AQ9H0K4 717 aa34■■■■□ 3.03
TSC2-208ENST00000461648 SPG7Q9UQ90 795 aa34■■■■□ 3.03
TSC2-208ENST00000461648 FCHSD2O94868 740 aa33.99■■■■□ 3.03
TSC2-208ENST00000461648 WDR43Q15061 677 aaKnown RBP eCLIP33.99■■■■□ 3.03
TSC2-208ENST00000461648 MARCH10Q8NA82 808 aaPredicted RBP33.99■■■■□ 3.03
TSC2-208ENST00000461648 PLEKHO1Q53GL0 409 aaPredicted RBP33.98■■■■□ 3.03
TSC2-208ENST00000461648 DDX54Q8TDD1 881 aaKnown RBP33.98■■■■□ 3.03
TSC2-208ENST00000461648 AMOTQ4VCS5 1084 aa33.97■■■■□ 3.03
TSC2-208ENST00000461648 FAM182BQ5T319 152 aa33.97■■■■□ 3.03
TSC2-208ENST00000461648 PCDH11XQ9BZA7 1347 aa33.97■■■■□ 3.03
TSC2-208ENST00000461648 PCDH11YQ9BZA8 1340 aa33.97■■■■□ 3.03
TSC2-208ENST00000461648 PRKAR2BP31323 418 aa33.96■■■■□ 3.03
TSC2-208ENST00000461648 CYP27B1O15528 508 aa33.91■■■■□ 3.02
TSC2-208ENST00000461648 FAM196AQ6ZSG2 479 aa33.91■■■■□ 3.02
TSC2-208ENST00000461648 PNNQ9H307 717 aaKnown RBP33.91■■■■□ 3.02
TSC2-208ENST00000461648 ADAMTS8Q9UP79 889 aa33.9■■■■□ 3.02
TSC2-208ENST00000461648 ZNF530Q6P9A1 599 aaPredicted RBP33.89■■■■□ 3.02
TSC2-208ENST00000461648 MIER1Q8N108 512 aa33.89■■■■□ 3.02
TSC2-208ENST00000461648 CCER2I3L3R5 266 aa33.88■■■■□ 3.01
TSC2-208ENST00000461648 IFNL2Q8IZJ0 200 aa33.88■■■■□ 3.01
TSC2-208ENST00000461648 PNISRQ8TF01 805 aaKnown RBP33.88■■■■□ 3.01
TSC2-208ENST00000461648 BCL9O00512 1426 aa33.87■■■■□ 3.01
TSC2-208ENST00000461648 PHKG2P15735 406 aa33.87■■■■□ 3.01
TSC2-208ENST00000461648 MTHFSDQ2M296 383 aaKnown RBP33.87■■■■□ 3.01
TSC2-208ENST00000461648 PHACTR3Q96KR7 559 aa33.87■■■■□ 3.01
TSC2-208ENST00000461648 PLEKHF1Q96S99 279 aa33.87■■■■□ 3.01
TSC2-208ENST00000461648 SBF2Q86WG5 1849 aa33.86■■■■□ 3.01
TSC2-208ENST00000461648 NEFMP07197 916 aa33.85■■■■□ 3.01
TSC2-208ENST00000461648 C1orf141Q5JVX7 400 aa33.84■■■■□ 3.01
TSC2-208ENST00000461648 GAS2L2Q8NHY3 880 aa33.84■■■■□ 3.01
TSC2-208ENST00000461648 NKX1-1Q15270 411 aaPredicted RBP33.82■■■■□ 3
TSC2-208ENST00000461648 MAPK8IP3Q9UPT6 1336 aa33.81■■■■□ 3
TSC2-208ENST00000461648 AKAP4Q5JQC9 854 aa33.81■■■■□ 3
TSC2-208ENST00000461648 DOT1LQ8TEK3 1739 aa33.81■■■■□ 3
TSC2-208ENST00000461648 KAT6BQ8WYB5 2073 aa33.8■■■■□ 3
TSC2-208ENST00000461648 HSP90AB1P08238 724 aaKnown RBP33.79■■■■□ 3
TSC2-208ENST00000461648 CCDC146Q8IYE0 955 aa33.79■■■■□ 3
TSC2-208ENST00000461648 RUNDC1Q96C34 613 aa33.78■■■■□ 3
TSC2-208ENST00000461648 NHSQ6T4R5 1651 aa33.77■■■■□ 3
TSC2-208ENST00000461648 TOGARAM1Q9Y4F4 1720 aa33.77■■■■□ 3
TSC2-208ENST00000461648 ACSBG1Q96GR2 724 aa33.76■■■□□ 2.99
TSC2-208ENST00000461648 VIRMAQ69YN4 1812 aaKnown RBP33.75■■■□□ 2.99
TSC2-208ENST00000461648 TRIM37O94972 964 aa33.75■■■□□ 2.99
TSC2-208ENST00000461648 MAP3K5Q99683 1374 aa33.74■■■□□ 2.99
TSC2-208ENST00000461648 EP400Q96L91 3159 aa33.74■■■□□ 2.99
TSC2-208ENST00000461648 FAM9BQ8IZU0 186 aa33.74■■■□□ 2.99
TSC2-208ENST00000461648 DCAF5Q96JK2 942 aa33.74■■■□□ 2.99
TSC2-208ENST00000461648 DLG5Q8TDM6 1919 aa33.74■■■□□ 2.99
TSC2-208ENST00000461648 SCN11AQ9UI33 1791 aa33.74■■■□□ 2.99
TSC2-208ENST00000461648 KDM6AO15550 1401 aaPredicted RBP33.73■■■□□ 2.99
TSC2-208ENST00000461648 MPRIPQ6WCQ1 1025 aa33.73■■■□□ 2.99
TSC2-208ENST00000461648 ITGB4P16144 1822 aa33.72■■■□□ 2.99
TSC2-208ENST00000461648 GNAT3A8MTJ3 354 aa33.72■■■□□ 2.99
TSC2-208ENST00000461648 NFE2L2Q16236 605 aa33.72■■■□□ 2.99
TSC2-208ENST00000461648 TNS1Q9HBL0 1735 aaKnown RBP33.72■■■□□ 2.99
TSC2-208ENST00000461648 KCNQ2O43526 872 aa33.71■■■□□ 2.99
TSC2-208ENST00000461648 UPF1Q92900 1129 aaKnown RBP eCLIP33.71■■■□□ 2.99
TSC2-208ENST00000461648 PRIM1P49642 420 aaKnown RBP33.7■■■□□ 2.99
TSC2-208ENST00000461648 BCL11BQ9C0K0 894 aaPredicted RBP33.7■■■□□ 2.99
TSC2-208ENST00000461648 ADAMTS7Q9UKP4 1686 aa33.7■■■□□ 2.99
TSC2-208ENST00000461648 CCDC125Q86Z20 511 aa33.69■■■□□ 2.98
TSC2-208ENST00000461648 PTF1AQ7RTS3 328 aa33.68■■■□□ 2.98
TSC2-208ENST00000461648 SYTL4Q96C24 671 aaPredicted RBP33.68■■■□□ 2.98
TSC2-208ENST00000461648 RNMTO43148 476 aaKnown RBP33.67■■■□□ 2.98
TSC2-208ENST00000461648 ERVV-2B6SEH9 535 aa33.66■■■□□ 2.98
TSC2-208ENST00000461648 BTAF1O14981 1849 aa33.66■■■□□ 2.98
TSC2-208ENST00000461648 TMPOP42166 694 aaKnown RBP33.66■■■□□ 2.98
TSC2-208ENST00000461648 LGR6Q9HBX8 967 aa33.66■■■□□ 2.98
TSC2-208ENST00000461648 SF3B2Q13435 895 aaKnown RBP33.65■■■□□ 2.98
TSC2-208ENST00000461648 HTATSF1O43719 755 aaKnown RBP33.64■■■□□ 2.98
TSC2-208ENST00000461648 RTF1Q92541 710 aaKnown RBP33.64■■■□□ 2.98
TSC2-208ENST00000461648 APAF1O14727 1248 aa33.62■■■□□ 2.97
TSC2-208ENST00000461648 RIPK4P57078 832 aa33.62■■■□□ 2.97
TSC2-208ENST00000461648 IL17REQ8NFR9 667 aa33.62■■■□□ 2.97
TSC2-208ENST00000461648 TMOD3Q9NYL9 352 aa33.62■■■□□ 2.97
TSC2-208ENST00000461648 RRP7AQ9Y3A4 280 aaKnown RBP33.62■■■□□ 2.97
TSC2-208ENST00000461648 CABP4P57796 275 aa33.61■■■□□ 2.97
TSC2-208ENST00000461648 SOCS7O14512 581 aa33.6■■■□□ 2.97
TSC2-208ENST00000461648 APBA3O96018 575 aa33.6■■■□□ 2.97
TSC2-208ENST00000461648 MRC1P22897 1456 aa33.6■■■□□ 2.97
TSC2-208ENST00000461648 NEUROD2Q15784 382 aa33.59■■■□□ 2.97
TSC2-208ENST00000461648 PIGBQ92521 554 aa33.59■■■□□ 2.97
TSC2-208ENST00000461648 CEMIPQ8WUJ3 1361 aa33.59■■■□□ 2.97
TSC2-208ENST00000461648 MCM10Q7L590 875 aa33.58■■■□□ 2.97
TSC2-208ENST00000461648 LMOD3Q0VAK6 560 aa33.57■■■□□ 2.96
TSC2-208ENST00000461648 DCTN1Q14203 1278 aa33.57■■■□□ 2.96
TSC2-208ENST00000461648 SLC52A2Q9HAB3 445 aa33.57■■■□□ 2.96
TSC2-208ENST00000461648 BAG6P46379 1132 aa33.56■■■□□ 2.96
TSC2-208ENST00000461648 NFATC2IPQ8NCF5 419 aa33.56■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms