RNA–Protein interactions for RNA: ENST00000461490.1

PDE6B-204, Transcript of phosphodiesterase 6B, humanhuman

TSL 3

Gene PDE6B, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-204ENST00000461490 SF3B2Q13435 895 aaKnown RBP9.73□□□□□ -0.85
PDE6B-204ENST00000461490 KRT27Q7Z3Y8 459 aa9.73□□□□□ -0.85
PDE6B-204ENST00000461490 DEFB132Q7Z7B7 95 aa9.73□□□□□ -0.85
PDE6B-204ENST00000461490 ABTB2Q8N961 1025 aa9.73□□□□□ -0.85
PDE6B-204ENST00000461490 MS4A4AQ96JQ5 239 aa9.73□□□□□ -0.85
PDE6B-204ENST00000461490 STRN4Q9NRL3 753 aa9.73□□□□□ -0.85
PDE6B-204ENST00000461490 TRPM1Q7Z4N2 1603 aa9.72□□□□□ -0.85
PDE6B-204ENST00000461490 ZBTB7CA1YPR0 619 aa9.72□□□□□ -0.85
PDE6B-204ENST00000461490 FAM182BQ5T319 152 aa9.72□□□□□ -0.85
PDE6B-204ENST00000461490 IRX2Q9BZI1 471 aaPredicted RBP9.72□□□□□ -0.85
PDE6B-204ENST00000461490 KIAA0232Q92628 1395 aa9.72□□□□□ -0.85
PDE6B-204ENST00000461490 PLEKHG3A1L390 1219 aa9.71□□□□□ -0.86
PDE6B-204ENST00000461490 SOX12O15370 315 aa9.71□□□□□ -0.86
PDE6B-204ENST00000461490 NUDT7P0C024 238 aa9.71□□□□□ -0.86
PDE6B-204ENST00000461490 EVA1CP58658 441 aa9.71□□□□□ -0.86
PDE6B-204ENST00000461490 USP35Q9P2H5 1018 aa9.71□□□□□ -0.86
PDE6B-204ENST00000461490 PPIP5K1Q6PFW1 1433 aa9.71□□□□□ -0.86
PDE6B-204ENST00000461490 ONECUT3O60422 494 aaPredicted RBP9.7□□□□□ -0.86
PDE6B-204ENST00000461490 CABP1Q9NZU7 370 aa9.7□□□□□ -0.86
PDE6B-204ENST00000461490 LHX6Q9UPM6 363 aa9.7□□□□□ -0.86
PDE6B-204ENST00000461490 POLR3AO14802 1390 aaPredicted RBP9.7□□□□□ -0.86
PDE6B-204ENST00000461490 ROCK2O75116 1388 aaKnown RBP9.69□□□□□ -0.86
PDE6B-204ENST00000461490 BLMP54132 1417 aaPredicted RBP9.69□□□□□ -0.86
PDE6B-204ENST00000461490 SPATA31A5Q5VU36 1347 aa9.69□□□□□ -0.86
PDE6B-204ENST00000461490 SPATA31A7Q8IWB4 1347 aa9.69□□□□□ -0.86
PDE6B-204ENST00000461490 CIZ1Q9ULV3 898 aaPredicted RBP9.69□□□□□ -0.86
PDE6B-204ENST00000461490 RGPD5Q99666 1765 aa9.68□□□□□ -0.86
PDE6B-204ENST00000461490 NLRP13Q86W25 1043 aa9.68□□□□□ -0.86
PDE6B-204ENST00000461490 KAT6BQ8WYB5 2073 aa9.67□□□□□ -0.86
PDE6B-204ENST00000461490 EVC2Q86UK5 1308 aa9.67□□□□□ -0.86
PDE6B-204ENST00000461490 ARHGAP33O14559 1287 aa9.67□□□□□ -0.86
PDE6B-204ENST00000461490 HRO43593 1189 aa9.67□□□□□ -0.86
PDE6B-204ENST00000461490 NLRP6P59044 892 aa9.67□□□□□ -0.86
PDE6B-204ENST00000461490 NRKQ7Z2Y5 1582 aa9.67□□□□□ -0.86
PDE6B-204ENST00000461490 BRD4O60885 1362 aaPredicted RBP9.66□□□□□ -0.86
PDE6B-204ENST00000461490 AKAP12Q02952 1782 aa9.66□□□□□ -0.86
PDE6B-204ENST00000461490 SPATA31A1Q5TZJ5 1347 aa9.66□□□□□ -0.86
PDE6B-204ENST00000461490 RGPD1P0DJD0 1748 aa9.66□□□□□ -0.86
PDE6B-204ENST00000461490 TK2O00142 265 aa9.66□□□□□ -0.86
PDE6B-204ENST00000461490 GCP02774 474 aa9.66□□□□□ -0.86
PDE6B-204ENST00000461490 IFFO2Q5TF58 517 aa9.66□□□□□ -0.86
PDE6B-204ENST00000461490 LARP1Q6PKG0 1096 aaKnown RBP9.66□□□□□ -0.86
PDE6B-204ENST00000461490 THSD7AQ9UPZ6 1657 aa9.65□□□□□ -0.86
PDE6B-204ENST00000461490 CAMTA1Q9Y6Y1 1673 aa9.65□□□□□ -0.86
PDE6B-204ENST00000461490 BAG6P46379 1132 aa9.65□□□□□ -0.86
PDE6B-204ENST00000461490 EN1Q05925 392 aaPredicted RBP9.65□□□□□ -0.86
PDE6B-204ENST00000461490 USP6P35125 1406 aa9.65□□□□□ -0.87
PDE6B-204ENST00000461490 PSDA5PKW4 1024 aaPredicted RBP9.64□□□□□ -0.87
PDE6B-204ENST00000461490 TRIM37O94972 964 aa9.64□□□□□ -0.87
PDE6B-204ENST00000461490 PDE3BQ13370 1112 aa9.64□□□□□ -0.87
PDE6B-204ENST00000461490 CARD11Q9BXL7 1154 aa9.64□□□□□ -0.87
PDE6B-204ENST00000461490 PIK3C2AO00443 1686 aa9.64□□□□□ -0.87
PDE6B-204ENST00000461490 LMO7Q8WWI1 1683 aa9.64□□□□□ -0.87
PDE6B-204ENST00000461490 SSH2Q76I76 1423 aa9.64□□□□□ -0.87
PDE6B-204ENST00000461490 USP19O94966 1318 aa9.63□□□□□ -0.87
PDE6B-204ENST00000461490 TNS1Q9HBL0 1735 aaKnown RBP9.63□□□□□ -0.87
PDE6B-204ENST00000461490 SPOCK2Q92563 424 aa9.63□□□□□ -0.87
PDE6B-204ENST00000461490 TONSLQ96HA7 1378 aa9.63□□□□□ -0.87
PDE6B-204ENST00000461490 SRCAPQ6ZRS2 3230 aa9.62□□□□□ -0.87
PDE6B-204ENST00000461490 SLC24A1O60721 1099 aa9.62□□□□□ -0.87
PDE6B-204ENST00000461490 SLC34A2O95436 690 aa9.62□□□□□ -0.87
PDE6B-204ENST00000461490 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.62□□□□□ -0.87
PDE6B-204ENST00000461490 TCP11L2Q8N4U5 519 aa9.62□□□□□ -0.87
PDE6B-204ENST00000461490 TMC1Q8TDI8 760 aa9.62□□□□□ -0.87
PDE6B-204ENST00000461490 KCTD12Q96CX2 325 aaKnown RBP9.62□□□□□ -0.87
PDE6B-204ENST00000461490 CPDO75976 1380 aa9.62□□□□□ -0.87
PDE6B-204ENST00000461490 TTC21BQ7Z4L5 1316 aa9.61□□□□□ -0.87
PDE6B-204ENST00000461490 COL18A1P39060 1754 aa9.61□□□□□ -0.87
PDE6B-204ENST00000461490 KIF3CO14782 793 aa9.61□□□□□ -0.87
PDE6B-204ENST00000461490 APBA3O96018 575 aa9.61□□□□□ -0.87
PDE6B-204ENST00000461490 EZH2Q15910 746 aaKnown RBP9.61□□□□□ -0.87
PDE6B-204ENST00000461490 FAM196AQ6ZSG2 479 aa9.61□□□□□ -0.87
PDE6B-204ENST00000461490 BARGINQ6ZT62 677 aa9.61□□□□□ -0.87
PDE6B-204ENST00000461490 PCDHGA4Q9Y5G9 962 aa9.61□□□□□ -0.87
PDE6B-204ENST00000461490 KTN1Q86UP2 1357 aaKnown RBP9.61□□□□□ -0.87
PDE6B-204ENST00000461490 COL5A2P05997 1499 aaPredicted RBP9.6□□□□□ -0.87
PDE6B-204ENST00000461490 MON2Q7Z3U7 1717 aa9.6□□□□□ -0.87
PDE6B-204ENST00000461490 TOM1L2Q6ZVM7 507 aa9.6□□□□□ -0.87
PDE6B-204ENST00000461490 SBF2Q86WG5 1849 aa9.6□□□□□ -0.87
PDE6B-204ENST00000461490 C11orf95C9JLR9 678 aaPredicted RBP9.59□□□□□ -0.87
PDE6B-204ENST00000461490 CSB-PGBD3P0DP91 1061 aa9.59□□□□□ -0.87
PDE6B-204ENST00000461490 TRIM26Q12899 539 aaPredicted RBP9.59□□□□□ -0.87
PDE6B-204ENST00000461490 THRAP3Q9Y2W1 955 aaKnown RBP9.59□□□□□ -0.87
PDE6B-204ENST00000461490 SLIT3O75094 1523 aa9.59□□□□□ -0.87
PDE6B-204ENST00000461490 LTN1O94822 1766 aa9.59□□□□□ -0.87
PDE6B-204ENST00000461490 PARP4Q9UKK3 1724 aaKnown RBP9.59□□□□□ -0.87
PDE6B-204ENST00000461490 WNK3Q9BYP7 1800 aa9.59□□□□□ -0.88
PDE6B-204ENST00000461490 CRB1P82279 1406 aa9.58□□□□□ -0.88
PDE6B-204ENST00000461490 R3HDM1Q15032 1099 aaKnown RBP9.58□□□□□ -0.88
PDE6B-204ENST00000461490 KCNH5Q8NCM2 988 aa9.58□□□□□ -0.88
PDE6B-204ENST00000461490 SLC12A5Q9H2X9 1139 aa9.58□□□□□ -0.88
PDE6B-204ENST00000461490 AATKQ6ZMQ8 1374 aa9.58□□□□□ -0.88
PDE6B-204ENST00000461490 TTC21AQ8NDW8 1320 aa9.57□□□□□ -0.88
PDE6B-204ENST00000461490 DMRTA1Q5VZB9 504 aa9.57□□□□□ -0.88
PDE6B-204ENST00000461490 ARHGEF25Q86VW2 580 aa9.57□□□□□ -0.88
PDE6B-204ENST00000461490 NME9Q86XW9 330 aa9.57□□□□□ -0.88
PDE6B-204ENST00000461490 CPSF1Q10570 1443 aaKnown RBP9.56□□□□□ -0.88
PDE6B-204ENST00000461490 C2orf72A6NCS6 295 aa9.56□□□□□ -0.88
PDE6B-204ENST00000461490 DDB1Q16531 1140 aa9.56□□□□□ -0.88
PDE6B-204ENST00000461490 HDGFL2Q7Z4V5 671 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms