RNA–Protein interactions for RNA: ENST00000461488.5

SMIM7-204, Transcript of small integral membrane protein 7, human

TSL 3

Gene SMIM7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMIM7-204	ENST00000461488	KDR	P35968	1356 aa		13.67	□□□□□ -0.22
SMIM7-204	ENST00000461488	RAPGEF4	Q8WZA2	1011 aa		13.66	□□□□□ -0.22
SMIM7-204	ENST00000461488	NUDC	Q9Y266	331 aa		13.66	□□□□□ -0.22
SMIM7-204	ENST00000461488	DLG5	Q8TDM6	1919 aa		13.66	□□□□□ -0.22
SMIM7-204	ENST00000461488	DOT1L	Q8TEK3	1739 aa		13.65	□□□□□ -0.22
SMIM7-204	ENST00000461488	ITGB4	P16144	1822 aa		13.65	□□□□□ -0.22
SMIM7-204	ENST00000461488	TAT	P17735	454 aa	Predicted RBP	13.65	□□□□□ -0.22
SMIM7-204	ENST00000461488	DDB1	Q16531	1140 aa		13.65	□□□□□ -0.22
SMIM7-204	ENST00000461488	USHBP1	Q8N6Y0	703 aa		13.65	□□□□□ -0.22
SMIM7-204	ENST00000461488	SCN11A	Q9UI33	1791 aa		13.64	□□□□□ -0.23
SMIM7-204	ENST00000461488	NHS	Q6T4R5	1651 aa		13.64	□□□□□ -0.23
SMIM7-204	ENST00000461488	TNS1	Q9HBL0	1735 aa	Known RBP	13.64	□□□□□ -0.23
SMIM7-204	ENST00000461488	EXOC5	O00471	708 aa		13.63	□□□□□ -0.23
SMIM7-204	ENST00000461488	PDE3B	Q13370	1112 aa		13.63	□□□□□ -0.23
SMIM7-204	ENST00000461488	KRT27	Q7Z3Y8	459 aa		13.63	□□□□□ -0.23
SMIM7-204	ENST00000461488	U2SURP	O15042	1029 aa	Known RBP	13.61	□□□□□ -0.23
SMIM7-204	ENST00000461488	SULT6B1	Q6IMI4	303 aa		13.61	□□□□□ -0.23
SMIM7-204	ENST00000461488	ZCRB1	Q8TBF4	217 aa	Known RBP	13.61	□□□□□ -0.23
SMIM7-204	ENST00000461488	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
SMIM7-204	ENST00000461488	TOGARAM1	Q9Y4F4	1720 aa		13.61	□□□□□ -0.23
SMIM7-204	ENST00000461488	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.6	□□□□□ -0.23
SMIM7-204	ENST00000461488	RGPD4	Q7Z3J3	1758 aa		13.6	□□□□□ -0.23
SMIM7-204	ENST00000461488	BCL9	O00512	1426 aa		13.6	□□□□□ -0.23
SMIM7-204	ENST00000461488	SPG7	Q9UQ90	795 aa		13.6	□□□□□ -0.23
SMIM7-204	ENST00000461488	PCDH11X	Q9BZA7	1347 aa		13.6	□□□□□ -0.23
SMIM7-204	ENST00000461488	PCDH11Y	Q9BZA8	1340 aa		13.6	□□□□□ -0.23
SMIM7-204	ENST00000461488	BTAF1	O14981	1849 aa		13.6	□□□□□ -0.23
SMIM7-204	ENST00000461488	AMOT	Q4VCS5	1084 aa		13.59	□□□□□ -0.23
SMIM7-204	ENST00000461488	ADAMTS7	Q9UKP4	1686 aa		13.59	□□□□□ -0.23
SMIM7-204	ENST00000461488	HMOX1	P09601	288 aa		13.58	□□□□□ -0.24
SMIM7-204	ENST00000461488	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.58	□□□□□ -0.24
SMIM7-204	ENST00000461488	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
SMIM7-204	ENST00000461488	DIEXF	Q68CQ4	756 aa	Known RBP	13.58	□□□□□ -0.24
SMIM7-204	ENST00000461488	AEBP1	Q8IUX7	1158 aa		13.58	□□□□□ -0.24
SMIM7-204	ENST00000461488	PNN	Q9H307	717 aa	Known RBP	13.58	□□□□□ -0.24
SMIM7-204	ENST00000461488	FCHSD2	O94868	740 aa		13.57	□□□□□ -0.24
SMIM7-204	ENST00000461488	WDR43	Q15061	677 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
SMIM7-204	ENST00000461488	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.57	□□□□□ -0.24
SMIM7-204	ENST00000461488	FAM196A	Q6ZSG2	479 aa		13.57	□□□□□ -0.24
SMIM7-204	ENST00000461488	MARCH10	Q8NA82	808 aa	Predicted RBP	13.57	□□□□□ -0.24
SMIM7-204	ENST00000461488	SIPA1L3	O60292	1781 aa	Predicted RBP	13.56	□□□□□ -0.24
SMIM7-204	ENST00000461488	RSPH6A	Q9H0K4	717 aa		13.56	□□□□□ -0.24
SMIM7-204	ENST00000461488	NEFM	P07197	916 aa		13.55	□□□□□ -0.24
SMIM7-204	ENST00000461488	PRKAR2B	P31323	418 aa		13.54	□□□□□ -0.24
SMIM7-204	ENST00000461488	IFNL2	Q8IZJ0	200 aa		13.54	□□□□□ -0.24
SMIM7-204	ENST00000461488	DDX54	Q8TDD1	881 aa	Known RBP	13.54	□□□□□ -0.24
SMIM7-204	ENST00000461488	MRS2	Q9HD23	443 aa		13.54	□□□□□ -0.24
SMIM7-204	ENST00000461488	LY75	O60449	1722 aa		13.53	□□□□□ -0.24
SMIM7-204	ENST00000461488	HSP90AB1	P08238	724 aa	Known RBP	13.53	□□□□□ -0.24
SMIM7-204	ENST00000461488	C1orf141	Q5JVX7	400 aa		13.53	□□□□□ -0.24
SMIM7-204	ENST00000461488	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.53	□□□□□ -0.24
SMIM7-204	ENST00000461488	RREB1	Q92766	1687 aa		13.53	□□□□□ -0.24
SMIM7-204	ENST00000461488	CYP27B1	O15528	508 aa		13.52	□□□□□ -0.25
SMIM7-204	ENST00000461488	PHKG2	P15735	406 aa		13.52	□□□□□ -0.25
SMIM7-204	ENST00000461488	NKX1-1	Q15270	411 aa	Predicted RBP	13.52	□□□□□ -0.25
SMIM7-204	ENST00000461488	FAM182B	Q5T319	152 aa		13.52	□□□□□ -0.25
SMIM7-204	ENST00000461488	CCDC125	Q86Z20	511 aa		13.52	□□□□□ -0.25
SMIM7-204	ENST00000461488	GAS2L2	Q8NHY3	880 aa		13.52	□□□□□ -0.25
SMIM7-204	ENST00000461488	MAPK8IP3	Q9UPT6	1336 aa		13.52	□□□□□ -0.25
SMIM7-204	ENST00000461488	CCER2	I3L3R5	266 aa		13.51	□□□□□ -0.25
SMIM7-204	ENST00000461488	AKAP4	Q5JQC9	854 aa		13.51	□□□□□ -0.25
SMIM7-204	ENST00000461488	EP400	Q96L91	3159 aa		13.51	□□□□□ -0.25
SMIM7-204	ENST00000461488	PAPPA	Q13219	1627 aa		13.5	□□□□□ -0.25
SMIM7-204	ENST00000461488	MRC1	P22897	1456 aa		13.5	□□□□□ -0.25
SMIM7-204	ENST00000461488	MAP3K5	Q99683	1374 aa		13.49	□□□□□ -0.25
SMIM7-204	ENST00000461488	TAF1L	Q8IZX4	1826 aa		13.49	□□□□□ -0.25
SMIM7-204	ENST00000461488	SF3B2	Q13435	895 aa	Known RBP	13.49	□□□□□ -0.25
SMIM7-204	ENST00000461488	MTHFSD	Q2M296	383 aa	Known RBP	13.49	□□□□□ -0.25
SMIM7-204	ENST00000461488	CCDC184	Q52MB2	194 aa		13.49	□□□□□ -0.25
SMIM7-204	ENST00000461488	DCAF5	Q96JK2	942 aa		13.49	□□□□□ -0.25
SMIM7-204	ENST00000461488	PLEKHF1	Q96S99	279 aa		13.49	□□□□□ -0.25
SMIM7-204	ENST00000461488	ZNF831	Q5JPB2	1677 aa		13.49	□□□□□ -0.25
SMIM7-204	ENST00000461488	KDM6A	O15550	1401 aa	Predicted RBP	13.48	□□□□□ -0.25
SMIM7-204	ENST00000461488	UBR2	Q8IWV8	1755 aa		13.48	□□□□□ -0.25
SMIM7-204	ENST00000461488	NUP188	Q5SRE5	1749 aa		13.48	□□□□□ -0.25
SMIM7-204	ENST00000461488	PNISR	Q8TF01	805 aa	Known RBP	13.48	□□□□□ -0.25
SMIM7-204	ENST00000461488	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.48	□□□□□ -0.25
SMIM7-204	ENST00000461488	ADAMTS8	Q9UP79	889 aa		13.48	□□□□□ -0.25
SMIM7-204	ENST00000461488	GNAT3	A8MTJ3	354 aa		13.47	□□□□□ -0.25
SMIM7-204	ENST00000461488	TRIM37	O94972	964 aa		13.47	□□□□□ -0.25
SMIM7-204	ENST00000461488	RUNDC1	Q96C34	613 aa		13.47	□□□□□ -0.25
SMIM7-204	ENST00000461488	PHACTR3	Q96KR7	559 aa		13.47	□□□□□ -0.25
SMIM7-204	ENST00000461488	KDM3B	Q7LBC6	1761 aa		13.47	□□□□□ -0.25
SMIM7-204	ENST00000461488	CIC	Q96RK0	1608 aa	Predicted RBP	13.46	□□□□□ -0.25
SMIM7-204	ENST00000461488	SRCAP	Q6ZRS2	3230 aa		13.46	□□□□□ -0.25
SMIM7-204	ENST00000461488	ERVV-2	B6SEH9	535 aa		13.46	□□□□□ -0.25
SMIM7-204	ENST00000461488	HTATSF1	O43719	755 aa	Known RBP	13.46	□□□□□ -0.25
SMIM7-204	ENST00000461488	NFE2L2	Q16236	605 aa		13.46	□□□□□ -0.25
SMIM7-204	ENST00000461488	ACSBG1	Q96GR2	724 aa		13.46	□□□□□ -0.25
SMIM7-204	ENST00000461488	C5	P01031	1676 aa		13.46	□□□□□ -0.26
SMIM7-204	ENST00000461488	BAG6	P46379	1132 aa		13.45	□□□□□ -0.26
SMIM7-204	ENST00000461488	LMOD3	Q0VAK6	560 aa		13.44	□□□□□ -0.26
SMIM7-204	ENST00000461488	MPRIP	Q6WCQ1	1025 aa		13.44	□□□□□ -0.26
SMIM7-204	ENST00000461488	RTF1	Q92541	710 aa	Known RBP	13.44	□□□□□ -0.26
SMIM7-204	ENST00000461488	SYTL4	Q96C24	671 aa	Predicted RBP	13.44	□□□□□ -0.26
SMIM7-204	ENST00000461488	TMOD3	Q9NYL9	352 aa		13.44	□□□□□ -0.26
SMIM7-204	ENST00000461488	CEMIP	Q8WUJ3	1361 aa		13.44	□□□□□ -0.26
SMIM7-204	ENST00000461488	RNMT	O43148	476 aa	Known RBP	13.43	□□□□□ -0.26
SMIM7-204	ENST00000461488	KCNQ2	O43526	872 aa		13.43	□□□□□ -0.26
SMIM7-204	ENST00000461488	COL5A3	P25940	1745 aa	Predicted RBP	13.43	□□□□□ -0.26

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