RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 LORP23490 312 aaPredicted RBP5.52□□□□□ -1.53
VCL-203ENST00000461383 KCNA1Q09470 495 aa5.52□□□□□ -1.53
VCL-203ENST00000461383 EML3Q32P44 896 aa5.52□□□□□ -1.53
VCL-203ENST00000461383 TMCO4Q5TGY1 634 aa5.52□□□□□ -1.53
VCL-203ENST00000461383 B4GALNT3Q6L9W6 998 aa5.52□□□□□ -1.53
VCL-203ENST00000461383 MRPL14Q6P1L8 145 aaKnown RBP5.52□□□□□ -1.53
VCL-203ENST00000461383 SH3RF1Q7Z6J0 888 aa5.52□□□□□ -1.53
VCL-203ENST00000461383 BPHLQ86WA6 291 aaPredicted RBP5.52□□□□□ -1.53
VCL-203ENST00000461383 PLEKHM2Q8IWE5 1019 aa5.52□□□□□ -1.53
VCL-203ENST00000461383 PLPP7Q8NBV4 271 aa5.52□□□□□ -1.53
VCL-203ENST00000461383 ZFP42Q96MM3 310 aa5.52□□□□□ -1.53
VCL-203ENST00000461383 MKRN1Q9UHC7 482 aaKnown RBP5.52□□□□□ -1.53
VCL-203ENST00000461383 NOVA2Q9UNW9 492 aaKnown RBP5.52□□□□□ -1.53
VCL-203ENST00000461383 ATP5J2-PTCD1G3V325 749 aa5.51□□□□□ -1.53
VCL-203ENST00000461383 LZTS3O60299 673 aaPredicted RBP5.51□□□□□ -1.53
VCL-203ENST00000461383 RASA1P20936 1047 aa5.51□□□□□ -1.53
VCL-203ENST00000461383 NR5A1Q13285 461 aa5.51□□□□□ -1.53
VCL-203ENST00000461383 NCOA4Q13772 614 aa5.51□□□□□ -1.53
VCL-203ENST00000461383 MAP7D1Q3KQU3 841 aa5.51□□□□□ -1.53
VCL-203ENST00000461383 C4orf48Q5BLP8 95 aa5.51□□□□□ -1.53
VCL-203ENST00000461383 KANK4Q5T7N3 995 aaPredicted RBP5.51□□□□□ -1.53
VCL-203ENST00000461383 SH3BP5LQ7L8J4 393 aa5.51□□□□□ -1.53
VCL-203ENST00000461383 TRMT44Q8IYL2 757 aaKnown RBP5.51□□□□□ -1.53
VCL-203ENST00000461383 FOXJ1Q92949 421 aa5.51□□□□□ -1.53
VCL-203ENST00000461383 IRF7Q92985 503 aa5.51□□□□□ -1.53
VCL-203ENST00000461383 SLC10A4Q96EP9 437 aa5.51□□□□□ -1.53
VCL-203ENST00000461383 RBM19Q9Y4C8 960 aaKnown RBP5.51□□□□□ -1.53
VCL-203ENST00000461383 MAP4K5Q9Y4K4 846 aa5.51□□□□□ -1.53
VCL-203ENST00000461383 USP17L15C9J2P7 530 aa5.5□□□□□ -1.53
VCL-203ENST00000461383 USP17L10C9JJH3 530 aa5.5□□□□□ -1.53
VCL-203ENST00000461383 USP17L13C9JLJ4 530 aa5.5□□□□□ -1.53
VCL-203ENST00000461383 USP17L12C9JPN9 530 aa5.5□□□□□ -1.53
VCL-203ENST00000461383 USP17L11C9JVI0 530 aa5.5□□□□□ -1.53
VCL-203ENST00000461383 USP17L21D6R901 530 aa5.5□□□□□ -1.53
VCL-203ENST00000461383 USP17L18D6R9N7 530 aa5.5□□□□□ -1.53
VCL-203ENST00000461383 USP17L22D6RA61 530 aa5.5□□□□□ -1.53
VCL-203ENST00000461383 USP17L17D6RBQ6 530 aa5.5□□□□□ -1.53
VCL-203ENST00000461383 USP17L19D6RCP7 530 aa5.5□□□□□ -1.53
VCL-203ENST00000461383 USP17L20D6RJB6 530 aa5.5□□□□□ -1.53
VCL-203ENST00000461383 WDR4P57081 412 aaKnown RBP5.5□□□□□ -1.53
VCL-203ENST00000461383 USP17L24Q0WX57 530 aa5.5□□□□□ -1.53
VCL-203ENST00000461383 ELOAQ14241 798 aaKnown RBP5.5□□□□□ -1.53
VCL-203ENST00000461383 OCSTAMPQ9BR26 566 aa5.5□□□□□ -1.53
VCL-203ENST00000461383 DOLKQ9UPQ8 538 aa5.5□□□□□ -1.53
VCL-203ENST00000461383 FAM196BA6NMK8 535 aa5.49□□□□□ -1.53
VCL-203ENST00000461383 NR3C2P08235 984 aa5.49□□□□□ -1.53
VCL-203ENST00000461383 GMPRP36959 345 aa5.49□□□□□ -1.53
VCL-203ENST00000461383 SCARF1Q14162 830 aa5.49□□□□□ -1.53
VCL-203ENST00000461383 RNF20Q5VTR2 975 aa5.49□□□□□ -1.53
VCL-203ENST00000461383 TRIM50Q86XT4 487 aa5.49□□□□□ -1.53
VCL-203ENST00000461383 FAM200AQ8TCP9 573 aa5.49□□□□□ -1.53
VCL-203ENST00000461383 NOD1Q9Y239 953 aa5.49□□□□□ -1.53
VCL-203ENST00000461383 TMEM88BA6NKF7 163 aa5.48□□□□□ -1.53
VCL-203ENST00000461383 GRM5P41594 1212 aa5.48□□□□□ -1.53
VCL-203ENST00000461383 ATP1A2P50993 1020 aa5.48□□□□□ -1.53
VCL-203ENST00000461383 NBPF20Q3BBV1 942 aa5.48□□□□□ -1.53
VCL-203ENST00000461383 ERFEQ4G0M1 354 aa5.48□□□□□ -1.53
VCL-203ENST00000461383 CRTC2Q53ET0 693 aaPredicted RBP5.48□□□□□ -1.53
VCL-203ENST00000461383 OXLD1Q5BKU9 147 aa5.48□□□□□ -1.53
VCL-203ENST00000461383 NPM2Q86SE8 214 aaKnown RBP5.48□□□□□ -1.53
VCL-203ENST00000461383 MEIOBQ8N635 442 aa5.48□□□□□ -1.53
VCL-203ENST00000461383 STK32AQ8WU08 396 aa5.48□□□□□ -1.53
VCL-203ENST00000461383 ZNF594Q96JF6 807 aaPredicted RBP5.48□□□□□ -1.53
VCL-203ENST00000461383 ERBB4Q15303 1308 aa5.48□□□□□ -1.53
VCL-203ENST00000461383 FAM181BA6NEQ2 426 aa5.47□□□□□ -1.53
VCL-203ENST00000461383 GIGYF1O75420 1035 aaPredicted RBP5.47□□□□□ -1.53
VCL-203ENST00000461383 ZIC2O95409 532 aaPredicted RBP5.47□□□□□ -1.53
VCL-203ENST00000461383 PSME1Q06323 249 aa5.47□□□□□ -1.53
VCL-203ENST00000461383 TMEM164Q5U3C3 297 aa5.47□□□□□ -1.53
VCL-203ENST00000461383 PHTF2Q8N3S3 785 aa5.47□□□□□ -1.53
VCL-203ENST00000461383 OGFOD1Q8N543 542 aa5.47□□□□□ -1.53
VCL-203ENST00000461383 SIRT1Q96EB6 747 aa5.47□□□□□ -1.53
VCL-203ENST00000461383 PURBQ96QR8 312 aaKnown RBP5.47□□□□□ -1.53
VCL-203ENST00000461383 ESF1Q9H501 851 aaKnown RBP5.47□□□□□ -1.53
VCL-203ENST00000461383 DNAAF2Q9NVR5 837 aaKnown RBP5.47□□□□□ -1.53
VCL-203ENST00000461383 CDV3Q9UKY7 258 aaKnown RBP5.47□□□□□ -1.53
VCL-203ENST00000461383 ZMIZ1Q9ULJ6 1067 aa5.47□□□□□ -1.53
VCL-203ENST00000461383 RAB15P59190 212 aa5.46□□□□□ -1.54
VCL-203ENST00000461383 PTK7Q13308 1070 aa5.46□□□□□ -1.54
VCL-203ENST00000461383 ANKMY2Q8IV38 441 aa5.46□□□□□ -1.54
VCL-203ENST00000461383 ZSCAN1Q8NBB4 408 aa5.46□□□□□ -1.54
VCL-203ENST00000461383 ITPKCQ96DU7 683 aa5.46□□□□□ -1.54
VCL-203ENST00000461383 ZFAND3Q9H8U3 227 aa5.46□□□□□ -1.54
VCL-203ENST00000461383 IVNS1ABPQ9Y6Y0 642 aa5.46□□□□□ -1.54
VCL-203ENST00000461383 MFAP1P55081 439 aaKnown RBP5.45□□□□□ -1.54
VCL-203ENST00000461383 DPYDQ12882 1025 aa5.45□□□□□ -1.54
VCL-203ENST00000461383 TSGA10IPQ3SY00 556 aa5.45□□□□□ -1.54
VCL-203ENST00000461383 LINC00528Q8N1L1 170 aa5.45□□□□□ -1.54
VCL-203ENST00000461383 CCER1Q8TC90 406 aaPredicted RBP5.45□□□□□ -1.54
VCL-203ENST00000461383 CDCA7Q9BWT1 371 aaPredicted RBP5.45□□□□□ -1.54
VCL-203ENST00000461383 PCDHB11Q9Y5F2 797 aa5.45□□□□□ -1.54
VCL-203ENST00000461383 MYCP01106 439 aaPredicted RBP5.44□□□□□ -1.54
VCL-203ENST00000461383 GTF2IP78347 998 aa5.44□□□□□ -1.54
VCL-203ENST00000461383 USP4Q13107 963 aa5.44□□□□□ -1.54
VCL-203ENST00000461383 CCDC125Q86Z20 511 aa5.44□□□□□ -1.54
VCL-203ENST00000461383 CCDC85AQ96PX6 553 aaPredicted RBP5.44□□□□□ -1.54
VCL-203ENST00000461383 SOS2Q07890 1332 aaPredicted RBP5.44□□□□□ -1.54
VCL-203ENST00000461383 FSHRP23945 695 aa5.43□□□□□ -1.54
VCL-203ENST00000461383 VEGFBP49765 207 aa5.43□□□□□ -1.54
VCL-203ENST00000461383 CLDN10P78369 228 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms