RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 LTV1Q96GA3 475 aaPredicted RBP9.59□□□□□ -0.87
LSG1-205ENST00000461343 PHACTR3Q96KR7 559 aa9.59□□□□□ -0.87
LSG1-205ENST00000461343 KIAA0232Q92628 1395 aa9.59□□□□□ -0.87
LSG1-205ENST00000461343 COL22A1Q8NFW1 1626 aaPredicted RBP9.58□□□□□ -0.88
LSG1-205ENST00000461343 BRPF1P55201 1214 aaPredicted RBP9.58□□□□□ -0.88
LSG1-205ENST00000461343 AEBP1Q8IUX7 1158 aa9.58□□□□□ -0.88
LSG1-205ENST00000461343 NLRP2Q9NX02 1062 aa9.58□□□□□ -0.88
LSG1-205ENST00000461343 CRYBG1Q9Y4K1 1723 aa9.58□□□□□ -0.88
LSG1-205ENST00000461343 WDR17Q8IZU2 1322 aa9.57□□□□□ -0.88
LSG1-205ENST00000461343 ZNF853P0CG23 659 aa9.57□□□□□ -0.88
LSG1-205ENST00000461343 EVA1CP58658 441 aa9.57□□□□□ -0.88
LSG1-205ENST00000461343 CDCA7Q9BWT1 371 aaPredicted RBP9.57□□□□□ -0.88
LSG1-205ENST00000461343 LMO7Q8WWI1 1683 aa9.56□□□□□ -0.88
LSG1-205ENST00000461343 CHL1O00533 1208 aa9.56□□□□□ -0.88
LSG1-205ENST00000461343 RARSP54136 660 aaKnown RBP9.56□□□□□ -0.88
LSG1-205ENST00000461343 TEFQ10587 303 aa9.56□□□□□ -0.88
LSG1-205ENST00000461343 MTHFSDQ2M296 383 aaKnown RBP9.56□□□□□ -0.88
LSG1-205ENST00000461343 NBPF6Q5VWK0 638 aa9.56□□□□□ -0.88
LSG1-205ENST00000461343 ARHGAP45Q92619 1136 aa9.56□□□□□ -0.88
LSG1-205ENST00000461343 NBPF4Q96M43 638 aa9.56□□□□□ -0.88
LSG1-205ENST00000461343 COL14A1Q05707 1796 aaKnown RBP9.55□□□□□ -0.88
LSG1-205ENST00000461343 DLG5Q8TDM6 1919 aa9.55□□□□□ -0.88
LSG1-205ENST00000461343 HOXB7P09629 217 aa9.55□□□□□ -0.88
LSG1-205ENST00000461343 TAF7Q15545 349 aaPredicted RBP9.55□□□□□ -0.88
LSG1-205ENST00000461343 ZKSCAN2Q63HK3 967 aa9.55□□□□□ -0.88
LSG1-205ENST00000461343 ZNF530Q6P9A1 599 aaPredicted RBP9.55□□□□□ -0.88
LSG1-205ENST00000461343 FTSJ3Q8IY81 847 aaKnown RBP9.55□□□□□ -0.88
LSG1-205ENST00000461343 CARD10Q9BWT7 1032 aa9.55□□□□□ -0.88
LSG1-205ENST00000461343 SMC4Q9NTJ3 1288 aa9.55□□□□□ -0.88
LSG1-205ENST00000461343 TSPYL4Q9UJ04 414 aa9.55□□□□□ -0.88
LSG1-205ENST00000461343 LAS1LQ9Y4W2 734 aaKnown RBP9.55□□□□□ -0.88
LSG1-205ENST00000461343 COL18A1P39060 1754 aa9.55□□□□□ -0.88
LSG1-205ENST00000461343 PHLPP1O60346 1717 aa9.54□□□□□ -0.88
LSG1-205ENST00000461343 ABCA3Q99758 1704 aa9.54□□□□□ -0.88
LSG1-205ENST00000461343 UBAP1LF5GYI3 381 aa9.54□□□□□ -0.88
LSG1-205ENST00000461343 EXOSC9Q06265 439 aaKnown RBP9.54□□□□□ -0.88
LSG1-205ENST00000461343 TOM1L2Q6ZVM7 507 aa9.54□□□□□ -0.88
LSG1-205ENST00000461343 IFNL2Q8IZJ0 200 aa9.54□□□□□ -0.88
LSG1-205ENST00000461343 DDX17Q92841 729 aaKnown RBP9.54□□□□□ -0.88
LSG1-205ENST00000461343 CCDC136Q96JN2 1154 aa9.54□□□□□ -0.88
LSG1-205ENST00000461343 PCDH11XQ9BZA7 1347 aa9.54□□□□□ -0.88
LSG1-205ENST00000461343 PCDH11YQ9BZA8 1340 aa9.54□□□□□ -0.88
LSG1-205ENST00000461343 PARP4Q9UKK3 1724 aaKnown RBP9.53□□□□□ -0.88
LSG1-205ENST00000461343 COL5A2P05997 1499 aaPredicted RBP9.53□□□□□ -0.88
LSG1-205ENST00000461343 CEMIPQ8WUJ3 1361 aa9.53□□□□□ -0.88
LSG1-205ENST00000461343 TWISTNBQ3B726 338 aaPredicted RBP9.53□□□□□ -0.88
LSG1-205ENST00000461343 ILDR1Q86SU0 546 aaPredicted RBP9.53□□□□□ -0.88
LSG1-205ENST00000461343 DCAF5Q96JK2 942 aa9.53□□□□□ -0.88
LSG1-205ENST00000461343 STK31Q9BXU1 1019 aa9.53□□□□□ -0.88
LSG1-205ENST00000461343 API5Q9BZZ5 524 aaKnown RBP9.53□□□□□ -0.88
LSG1-205ENST00000461343 SPINK5Q9NQ38 1064 aaPredicted RBP9.53□□□□□ -0.88
LSG1-205ENST00000461343 MBIPQ9NS73 344 aa9.53□□□□□ -0.88
LSG1-205ENST00000461343 THRAP3Q9Y2W1 955 aaKnown RBP9.53□□□□□ -0.88
LSG1-205ENST00000461343 CRB1P82279 1406 aa9.53□□□□□ -0.88
LSG1-205ENST00000461343 SPATA31A6Q5VVP1 1343 aa9.53□□□□□ -0.88
LSG1-205ENST00000461343 LRRC37A3O60309 1634 aa9.53□□□□□ -0.88
LSG1-205ENST00000461343 JCADQ9P266 1359 aa9.52□□□□□ -0.88
LSG1-205ENST00000461343 SENP3-EIF4A1A0A087X0R7 540 aa9.52□□□□□ -0.89
LSG1-205ENST00000461343 IL2RBP14784 551 aa9.52□□□□□ -0.89
LSG1-205ENST00000461343 CCDC30Q5VVM6 783 aa9.52□□□□□ -0.89
LSG1-205ENST00000461343 CABLES1Q8TDN4 633 aa9.52□□□□□ -0.89
LSG1-205ENST00000461343 TSR2Q969E8 191 aaKnown RBP9.52□□□□□ -0.89
LSG1-205ENST00000461343 AXIN2Q9Y2T1 843 aa9.52□□□□□ -0.89
LSG1-205ENST00000461343 COL16A1Q07092 1604 aaPredicted RBP9.52□□□□□ -0.89
LSG1-205ENST00000461343 PTPRCP08575 1304 aa9.52□□□□□ -0.89
LSG1-205ENST00000461343 ATF7IPQ6VMQ6 1270 aa9.51□□□□□ -0.89
LSG1-205ENST00000461343 MCM10Q7L590 875 aa9.51□□□□□ -0.89
LSG1-205ENST00000461343 CERKQ8TCT0 537 aa9.51□□□□□ -0.89
LSG1-205ENST00000461343 DDX19BQ9UMR2 479 aa9.51□□□□□ -0.89
LSG1-205ENST00000461343 CACNA1FO60840 1977 aa9.5□□□□□ -0.89
LSG1-205ENST00000461343 VAMP4O75379 141 aa9.5□□□□□ -0.89
LSG1-205ENST00000461343 PLEKHG5O94827 1062 aa9.5□□□□□ -0.89
LSG1-205ENST00000461343 CHRNA2Q15822 529 aa9.5□□□□□ -0.89
LSG1-205ENST00000461343 DZIP1LQ8IYY4 767 aaKnown RBP9.5□□□□□ -0.89
LSG1-205ENST00000461343 USHBP1Q8N6Y0 703 aa9.5□□□□□ -0.89
LSG1-205ENST00000461343 ZCRB1Q8TBF4 217 aaKnown RBP9.5□□□□□ -0.89
LSG1-205ENST00000461343 FRAT1Q92837 279 aaPredicted RBP9.5□□□□□ -0.89
LSG1-205ENST00000461343 PKD1L3Q7Z443 1732 aa9.49□□□□□ -0.89
LSG1-205ENST00000461343 FAM83GA6ND36 823 aa9.49□□□□□ -0.89
LSG1-205ENST00000461343 BTBD11A6QL63 1104 aa9.49□□□□□ -0.89
LSG1-205ENST00000461343 ERVV-2B6SEH9 535 aa9.49□□□□□ -0.89
LSG1-205ENST00000461343 RNMTO43148 476 aaKnown RBP9.49□□□□□ -0.89
LSG1-205ENST00000461343 PIP4K2BP78356 416 aa9.49□□□□□ -0.89
LSG1-205ENST00000461343 HDAC5Q9UQL6 1122 aa9.49□□□□□ -0.89
LSG1-205ENST00000461343 RGPD5Q99666 1765 aa9.49□□□□□ -0.89
LSG1-205ENST00000461343 NWD2Q9ULI1 1742 aa9.48□□□□□ -0.89
LSG1-205ENST00000461343 BCAR3O75815 825 aa9.48□□□□□ -0.89
LSG1-205ENST00000461343 PHKG2P15735 406 aa9.48□□□□□ -0.89
LSG1-205ENST00000461343 TTC5Q8N0Z6 440 aa9.48□□□□□ -0.89
LSG1-205ENST00000461343 IL17REQ8NFR9 667 aa9.48□□□□□ -0.89
LSG1-205ENST00000461343 SSH1Q8WYL5 1049 aa9.48□□□□□ -0.89
LSG1-205ENST00000461343 THUMPD2Q9BTF0 503 aaKnown RBP9.48□□□□□ -0.89
LSG1-205ENST00000461343 BTG4Q9NY30 223 aa9.48□□□□□ -0.89
LSG1-205ENST00000461343 HMGB2P26583 209 aaKnown RBP9.47□□□□□ -0.89
LSG1-205ENST00000461343 IRX6P78412 446 aaPredicted RBP9.47□□□□□ -0.89
LSG1-205ENST00000461343 DCTN1Q14203 1278 aa9.47□□□□□ -0.89
LSG1-205ENST00000461343 MVPQ14764 893 aaKnown RBP9.47□□□□□ -0.89
LSG1-205ENST00000461343 CENPQQ7L2Z9 268 aaPredicted RBP9.47□□□□□ -0.89
LSG1-205ENST00000461343 SLC52A2Q9HAB3 445 aa9.47□□□□□ -0.89
LSG1-205ENST00000461343 STRN4Q9NRL3 753 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms