RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 TMC1Q8TDI8 760 aa20.59■□□□□ 0.89
DNMT3A-207ENST00000461228 ATF5Q9Y2D1 282 aaPredicted RBP20.59■□□□□ 0.89
DNMT3A-207ENST00000461228 SMG6Q86US8 1419 aaKnown RBP20.59■□□□□ 0.89
DNMT3A-207ENST00000461228 ACSBG1Q96GR2 724 aa20.58■□□□□ 0.89
DNMT3A-207ENST00000461228 LRRC4BQ9NT99 713 aa20.58■□□□□ 0.89
DNMT3A-207ENST00000461228 MAP3K19Q56UN5 1328 aa20.57■□□□□ 0.88
DNMT3A-207ENST00000461228 HMGB2P26583 209 aaKnown RBP20.57■□□□□ 0.88
DNMT3A-207ENST00000461228 ZNF784Q8NCA9 323 aaPredicted RBP20.57■□□□□ 0.88
DNMT3A-207ENST00000461228 NCAPD2Q15021 1401 aa20.56■□□□□ 0.88
DNMT3A-207ENST00000461228 COG3Q96JB2 828 aa20.56■□□□□ 0.88
DNMT3A-207ENST00000461228 PNPLA7Q6ZV29 1317 aa20.55■□□□□ 0.88
DNMT3A-207ENST00000461228 HOXC9P31274 260 aa20.55■□□□□ 0.88
DNMT3A-207ENST00000461228 TOGARAM1Q9Y4F4 1720 aa20.55■□□□□ 0.88
DNMT3A-207ENST00000461228 PLEKHG2Q9H7P9 1386 aa20.53■□□□□ 0.88
DNMT3A-207ENST00000461228 ITGB4P16144 1822 aa20.53■□□□□ 0.88
DNMT3A-207ENST00000461228 POLD1P28340 1107 aa20.51■□□□□ 0.87
DNMT3A-207ENST00000461228 INSRP06213 1382 aa20.5■□□□□ 0.87
DNMT3A-207ENST00000461228 FLT4P35916 1363 aa20.5■□□□□ 0.87
DNMT3A-207ENST00000461228 UBR3Q6ZT12 1888 aa20.5■□□□□ 0.87
DNMT3A-207ENST00000461228 C4BP0C0L5 1744 aa20.49■□□□□ 0.87
DNMT3A-207ENST00000461228 USP47Q96K76 1375 aa20.48■□□□□ 0.87
DNMT3A-207ENST00000461228 NSD3Q9BZ95 1437 aa20.48■□□□□ 0.87
DNMT3A-207ENST00000461228 ZCRB1Q8TBF4 217 aaKnown RBP20.48■□□□□ 0.87
DNMT3A-207ENST00000461228 PCDH11XQ9BZA7 1347 aa20.48■□□□□ 0.87
DNMT3A-207ENST00000461228 PCDH11YQ9BZA8 1340 aa20.48■□□□□ 0.87
DNMT3A-207ENST00000461228 MAP2P11137 1827 aaKnown RBP20.48■□□□□ 0.87
DNMT3A-207ENST00000461228 ZNF831Q5JPB2 1677 aa20.48■□□□□ 0.87
DNMT3A-207ENST00000461228 ST20-MTHFSA0A0A6YYL1 179 aa20.47■□□□□ 0.87
DNMT3A-207ENST00000461228 AMPHP49418 695 aa20.46■□□□□ 0.87
DNMT3A-207ENST00000461228 DDX54Q8TDD1 881 aaKnown RBP20.46■□□□□ 0.87
DNMT3A-207ENST00000461228 TFCP2L1Q9NZI6 479 aa20.45■□□□□ 0.86
DNMT3A-207ENST00000461228 CEP350Q5VT06 3117 aa20.45■□□□□ 0.86
DNMT3A-207ENST00000461228 PRIM1P49642 420 aaKnown RBP20.44■□□□□ 0.86
DNMT3A-207ENST00000461228 CCNL1Q9UK58 526 aaPredicted RBP20.44■□□□□ 0.86
DNMT3A-207ENST00000461228 CDCA8Q53HL2 280 aa20.43■□□□□ 0.86
DNMT3A-207ENST00000461228 CICQ96RK0 1608 aaPredicted RBP20.42■□□□□ 0.86
DNMT3A-207ENST00000461228 FYB1O15117 783 aa20.42■□□□□ 0.86
DNMT3A-207ENST00000461228 TMF1P82094 1093 aa20.42■□□□□ 0.86
DNMT3A-207ENST00000461228 RAPGEF4Q8WZA2 1011 aa20.42■□□□□ 0.86
DNMT3A-207ENST00000461228 FLAD1Q8NFF5 587 aa20.41■□□□□ 0.86
DNMT3A-207ENST00000461228 SYTL4Q96C24 671 aaPredicted RBP20.41■□□□□ 0.86
DNMT3A-207ENST00000461228 LTV1Q96GA3 475 aaPredicted RBP20.41■□□□□ 0.86
DNMT3A-207ENST00000461228 C1QTNF8P60827 252 aa20.4■□□□□ 0.86
DNMT3A-207ENST00000461228 NBPF6Q5VWK0 638 aa20.4■□□□□ 0.86
DNMT3A-207ENST00000461228 PALLDQ8WX93 1383 aa20.4■□□□□ 0.86
DNMT3A-207ENST00000461228 NBPF4Q96M43 638 aa20.4■□□□□ 0.86
DNMT3A-207ENST00000461228 KIF13BQ9NQT8 1826 aa20.4■□□□□ 0.86
DNMT3A-207ENST00000461228 GPR162Q16538 588 aa20.39■□□□□ 0.85
DNMT3A-207ENST00000461228 GRIN3BO60391 1043 aa20.38■□□□□ 0.85
DNMT3A-207ENST00000461228 TATP17735 454 aaPredicted RBP20.37■□□□□ 0.85
DNMT3A-207ENST00000461228 RRS1Q15050 365 aaKnown RBP20.37■□□□□ 0.85
DNMT3A-207ENST00000461228 ADCY9O60503 1353 aa20.36■□□□□ 0.85
DNMT3A-207ENST00000461228 CD2APQ9Y5K6 639 aa20.36■□□□□ 0.85
DNMT3A-207ENST00000461228 COL5A3P25940 1745 aaPredicted RBP20.35■□□□□ 0.85
DNMT3A-207ENST00000461228 GIGYF1O75420 1035 aaPredicted RBP20.34■□□□□ 0.85
DNMT3A-207ENST00000461228 COL23A1Q86Y22 540 aaPredicted RBP20.34■□□□□ 0.85
DNMT3A-207ENST00000461228 NLGN2Q8NFZ4 835 aa20.34■□□□□ 0.85
DNMT3A-207ENST00000461228 SMARCC1Q92922 1105 aaPredicted RBP20.34■□□□□ 0.85
DNMT3A-207ENST00000461228 GGNBP2Q9H3C7 697 aa20.34■□□□□ 0.85
DNMT3A-207ENST00000461228 NKX1-1Q15270 411 aaPredicted RBP20.33■□□□□ 0.85
DNMT3A-207ENST00000461228 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.33■□□□□ 0.85
DNMT3A-207ENST00000461228 KIAA1551Q9HCM1 1747 aa20.33■□□□□ 0.84
DNMT3A-207ENST00000461228 CYP27B1O15528 508 aa20.31■□□□□ 0.84
DNMT3A-207ENST00000461228 HSP90AB2PQ58FF8 381 aa20.31■□□□□ 0.84
DNMT3A-207ENST00000461228 SENP3-EIF4A1A0A087X0R7 540 aa20.3■□□□□ 0.84
DNMT3A-207ENST00000461228 FBLN1P23142 703 aa20.3■□□□□ 0.84
DNMT3A-207ENST00000461228 KCNQ4P56696 695 aa20.3■□□□□ 0.84
DNMT3A-207ENST00000461228 YBX3P16989 372 aaKnown RBP eCLIP20.29■□□□□ 0.84
DNMT3A-207ENST00000461228 SSFA2P28290 1259 aa20.29■□□□□ 0.84
DNMT3A-207ENST00000461228 USHBP1Q8N6Y0 703 aa20.29■□□□□ 0.84
DNMT3A-207ENST00000461228 TIMELESSQ9UNS1 1208 aa20.29■□□□□ 0.84
DNMT3A-207ENST00000461228 WASHC2AQ641Q2 1341 aa20.28■□□□□ 0.84
DNMT3A-207ENST00000461228 BRCA1P38398 1863 aaKnown RBP20.28■□□□□ 0.84
DNMT3A-207ENST00000461228 KLHL34Q8N239 644 aa20.28■□□□□ 0.84
DNMT3A-207ENST00000461228 KDRP35968 1356 aa20.28■□□□□ 0.84
DNMT3A-207ENST00000461228 ATP10DQ9P241 1426 aa20.27■□□□□ 0.84
DNMT3A-207ENST00000461228 C4AP0C0L4 1744 aa20.27■□□□□ 0.83
DNMT3A-207ENST00000461228 AK7Q96M32 723 aa20.25■□□□□ 0.83
DNMT3A-207ENST00000461228 SPG7Q9UQ90 795 aa20.25■□□□□ 0.83
DNMT3A-207ENST00000461228 CLSPNQ9HAW4 1339 aa20.25■□□□□ 0.83
DNMT3A-207ENST00000461228 EMILIN1Q9Y6C2 1016 aa20.24■□□□□ 0.83
DNMT3A-207ENST00000461228 MPRIPQ6WCQ1 1025 aa20.23■□□□□ 0.83
DNMT3A-207ENST00000461228 CARD14Q9BXL6 1004 aa20.23■□□□□ 0.83
DNMT3A-207ENST00000461228 MSH5O43196 834 aa20.22■□□□□ 0.83
DNMT3A-207ENST00000461228 PELP1Q8IZL8 1130 aaKnown RBP20.22■□□□□ 0.83
DNMT3A-207ENST00000461228 ARFGEF1Q9Y6D6 1849 aa20.22■□□□□ 0.83
DNMT3A-207ENST00000461228 LOC102724428A0A0B4J2F2 783 aa20.21■□□□□ 0.83
DNMT3A-207ENST00000461228 SIK1P57059 783 aa20.21■□□□□ 0.83
DNMT3A-207ENST00000461228 PIGBQ92521 554 aa20.21■□□□□ 0.83
DNMT3A-207ENST00000461228 C10orf71Q711Q0 1435 aa20.2■□□□□ 0.82
DNMT3A-207ENST00000461228 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.2■□□□□ 0.82
DNMT3A-207ENST00000461228 MSL1Q68DK7 614 aa20.2■□□□□ 0.82
DNMT3A-207ENST00000461228 PXDNLA1KZ92 1463 aa20.18■□□□□ 0.82
DNMT3A-207ENST00000461228 IFNL2Q8IZJ0 200 aa20.18■□□□□ 0.82
DNMT3A-207ENST00000461228 TMOD3Q9NYL9 352 aa20.18■□□□□ 0.82
DNMT3A-207ENST00000461228 IGSF1Q8N6C5 1336 aa20.18■□□□□ 0.82
DNMT3A-207ENST00000461228 PHKG2P15735 406 aa20.17■□□□□ 0.82
DNMT3A-207ENST00000461228 AMIGO3Q86WK7 504 aa20.17■□□□□ 0.82
DNMT3A-207ENST00000461228 EYA1Q99502 592 aa20.17■□□□□ 0.82
DNMT3A-207ENST00000461228 SCN11AQ9UI33 1791 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms