RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 ERICH4A6NGS2 130 aa10.51□□□□□ -0.73
BRCA1-205ENST00000461221 FGFR1OPO95684 399 aaKnown RBP10.51□□□□□ -0.73
BRCA1-205ENST00000461221 CCDC113Q9H0I3 377 aa10.51□□□□□ -0.73
BRCA1-205ENST00000461221 RBM5P52756 815 aaKnown RBP eCLIP10.51□□□□□ -0.73
BRCA1-205ENST00000461221 IFFO1Q0D2I5 559 aa10.51□□□□□ -0.73
BRCA1-205ENST00000461221 HDGFL1Q5TGJ6 251 aa10.51□□□□□ -0.73
BRCA1-205ENST00000461221 FILIP1Q7Z7B0 1213 aa10.51□□□□□ -0.73
BRCA1-205ENST00000461221 HOOK3Q86VS8 718 aa10.51□□□□□ -0.73
BRCA1-205ENST00000461221 HMGB2P26583 209 aaKnown RBP10.51□□□□□ -0.73
BRCA1-205ENST00000461221 MYOM3Q5VTT5 1437 aa10.51□□□□□ -0.73
BRCA1-205ENST00000461221 CASQ1P31415 396 aa10.5□□□□□ -0.73
BRCA1-205ENST00000461221 LUZP1Q86V48 1076 aa10.5□□□□□ -0.73
BRCA1-205ENST00000461221 CCDC83Q8IWF9 413 aa10.5□□□□□ -0.73
BRCA1-205ENST00000461221 ZNF287Q9HBT7 754 aa10.5□□□□□ -0.73
BRCA1-205ENST00000461221 PTPRGP23470 1445 aa10.5□□□□□ -0.73
BRCA1-205ENST00000461221 GSTTP1A0A1W2PQM5 241 aa10.5□□□□□ -0.73
BRCA1-205ENST00000461221 POTEB2H3BUK9 544 aa10.5□□□□□ -0.73
BRCA1-205ENST00000461221 SFPQP23246 707 aaKnown RBP eCLIP10.5□□□□□ -0.73
BRCA1-205ENST00000461221 PRKAR2BP31323 418 aa10.5□□□□□ -0.73
BRCA1-205ENST00000461221 MTHFSP49914 203 aa10.5□□□□□ -0.73
BRCA1-205ENST00000461221 GRIPAP1Q4V328 841 aa10.5□□□□□ -0.73
BRCA1-205ENST00000461221 PHAXQ9H814 394 aaKnown RBP10.5□□□□□ -0.73
BRCA1-205ENST00000461221 NOB1Q9ULX3 412 aaKnown RBP10.5□□□□□ -0.73
BRCA1-205ENST00000461221 GIGYF2Q6Y7W6 1299 aaKnown RBP10.5□□□□□ -0.73
BRCA1-205ENST00000461221 CABP2Q9NPB3 220 aa10.5□□□□□ -0.73
BRCA1-205ENST00000461221 PTPN14Q15678 1187 aa10.49□□□□□ -0.73
BRCA1-205ENST00000461221 TAOK3Q9H2K8 898 aa10.49□□□□□ -0.73
BRCA1-205ENST00000461221 SLC4A2P04920 1241 aa10.49□□□□□ -0.73
BRCA1-205ENST00000461221 CABP4P57796 275 aa10.49□□□□□ -0.73
BRCA1-205ENST00000461221 JAKMIP1Q96N16 626 aaKnown RBP10.49□□□□□ -0.73
BRCA1-205ENST00000461221 FYCO1Q9BQS8 1478 aa10.49□□□□□ -0.73
BRCA1-205ENST00000461221 KIF20AO95235 890 aa10.49□□□□□ -0.73
BRCA1-205ENST00000461221 ABTB2Q8N961 1025 aa10.49□□□□□ -0.73
BRCA1-205ENST00000461221 C1orf115Q9H7X2 142 aa10.49□□□□□ -0.73
BRCA1-205ENST00000461221 ADAMTS8Q9UP79 889 aa10.49□□□□□ -0.73
BRCA1-205ENST00000461221 USO1O60763 962 aaKnown RBP10.49□□□□□ -0.73
BRCA1-205ENST00000461221 NUTM2GQ5VZR2 741 aa10.49□□□□□ -0.73
BRCA1-205ENST00000461221 CCDC150Q8NCX0 1101 aa10.49□□□□□ -0.73
BRCA1-205ENST00000461221 PAFAH1B1P43034 410 aa10.49□□□□□ -0.73
BRCA1-205ENST00000461221 CACNA2D4Q7Z3S7 1137 aa10.49□□□□□ -0.73
BRCA1-205ENST00000461221 AACSQ86V21 672 aa10.49□□□□□ -0.73
BRCA1-205ENST00000461221 ZSCAN29Q8IWY8 852 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-205ENST00000461221 SF3B2Q13435 895 aaKnown RBP10.48□□□□□ -0.73
BRCA1-205ENST00000461221 CCDC178Q5BJE1 867 aa10.48□□□□□ -0.73
BRCA1-205ENST00000461221 LARP1Q6PKG0 1096 aaKnown RBP10.48□□□□□ -0.73
BRCA1-205ENST00000461221 ANO10Q9NW15 660 aa10.48□□□□□ -0.73
BRCA1-205ENST00000461221 SPG7Q9UQ90 795 aa10.48□□□□□ -0.73
BRCA1-205ENST00000461221 ESPNB1AK53 854 aa10.48□□□□□ -0.73
BRCA1-205ENST00000461221 KIF18AQ8NI77 898 aa10.48□□□□□ -0.73
BRCA1-205ENST00000461221 TMOD2Q9NZR1 351 aa10.48□□□□□ -0.73
BRCA1-205ENST00000461221 SEC63Q9UGP8 760 aaKnown RBP10.48□□□□□ -0.73
BRCA1-205ENST00000461221 CCDC175P0C221 793 aa10.48□□□□□ -0.73
BRCA1-205ENST00000461221 SIL1Q9H173 461 aa10.48□□□□□ -0.73
BRCA1-205ENST00000461221 RAI14Q9P0K7 980 aa10.48□□□□□ -0.73
BRCA1-205ENST00000461221 CGNQ9P2M7 1197 aaKnown RBP10.48□□□□□ -0.73
BRCA1-205ENST00000461221 FKBP4Q02790 459 aaKnown RBP eCLIP10.48□□□□□ -0.73
BRCA1-205ENST00000461221 NAA15Q9BXJ9 866 aaKnown RBP10.48□□□□□ -0.73
BRCA1-205ENST00000461221 CALCOCO1Q9P1Z2 691 aa10.48□□□□□ -0.73
BRCA1-205ENST00000461221 CEP126Q9P2H0 1117 aa10.47□□□□□ -0.73
BRCA1-205ENST00000461221 ZSCAN30Q86W11 494 aa10.47□□□□□ -0.73
BRCA1-205ENST00000461221 CECR2Q9BXF3 1484 aa10.47□□□□□ -0.73
BRCA1-205ENST00000461221 KIF4BQ2VIQ3 1234 aa10.47□□□□□ -0.73
BRCA1-205ENST00000461221 C6orf163Q5TEZ5 329 aa10.47□□□□□ -0.73
BRCA1-205ENST00000461221 RAB34Q9BZG1 259 aa10.47□□□□□ -0.73
BRCA1-205ENST00000461221 GOPCQ9HD26 462 aa10.47□□□□□ -0.73
BRCA1-205ENST00000461221 SPECC1LQ69YQ0 1117 aa10.47□□□□□ -0.73
BRCA1-205ENST00000461221 CHD1LQ86WJ1 897 aa10.47□□□□□ -0.73
BRCA1-205ENST00000461221 FERP16591 822 aa10.46□□□□□ -0.73
BRCA1-205ENST00000461221 USP5P45974 858 aa10.46□□□□□ -0.73
BRCA1-205ENST00000461221 TICAM2Q86XR7 235 aa10.46□□□□□ -0.73
BRCA1-205ENST00000461221 CUX1P39880 1505 aa10.46□□□□□ -0.73
BRCA1-205ENST00000461221 PPP2R1AP30153 589 aa10.46□□□□□ -0.74
BRCA1-205ENST00000461221 RNF187Q5TA31 235 aaPredicted RBP10.46□□□□□ -0.74
BRCA1-205ENST00000461221 MAP4K4O95819 1239 aaPredicted RBP10.46□□□□□ -0.74
BRCA1-205ENST00000461221 TOP1P11387 765 aaKnown RBP10.46□□□□□ -0.74
BRCA1-205ENST00000461221 UBE4AQ14139 1066 aa10.46□□□□□ -0.74
BRCA1-205ENST00000461221 WDR63Q8IWG1 891 aa10.46□□□□□ -0.74
BRCA1-205ENST00000461221 MPNDQ8N594 471 aa10.46□□□□□ -0.74
BRCA1-205ENST00000461221 AIDAQ96BJ3 306 aa10.46□□□□□ -0.74
BRCA1-205ENST00000461221 SCLT1Q96NL6 688 aa10.46□□□□□ -0.74
BRCA1-205ENST00000461221 NEMFO60524 1076 aa10.45□□□□□ -0.74
BRCA1-205ENST00000461221 YEATS4O95619 227 aa10.45□□□□□ -0.74
BRCA1-205ENST00000461221 IGHMBP2P38935 993 aaKnown RBP10.45□□□□□ -0.74
BRCA1-205ENST00000461221 ALS2CR12Q96Q35 445 aa10.45□□□□□ -0.74
BRCA1-205ENST00000461221 EHMT1Q9H9B1 1298 aa10.45□□□□□ -0.74
BRCA1-205ENST00000461221 LRP2BPQ9P2M1 347 aa10.45□□□□□ -0.74
BRCA1-205ENST00000461221 CCDC196A0A1B0GTZ2 297 aa10.45□□□□□ -0.74
BRCA1-205ENST00000461221 MCM4P33991 863 aa10.45□□□□□ -0.74
BRCA1-205ENST00000461221 CTNNBL1Q8WYA6 563 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-205ENST00000461221 DDX12PQ92771 950 aa10.45□□□□□ -0.74
BRCA1-205ENST00000461221 CFAP57Q96MR6 1250 aa10.45□□□□□ -0.74
BRCA1-205ENST00000461221 CTAGE5O15320 804 aa10.45□□□□□ -0.74
BRCA1-205ENST00000461221 PPM1FP49593 454 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-205ENST00000461221 TMEM266Q2M3C6 531 aa10.45□□□□□ -0.74
BRCA1-205ENST00000461221 PLEKHH1Q9ULM0 1364 aa10.45□□□□□ -0.74
BRCA1-205ENST00000461221 PABPN1LA6NDY0 278 aaKnown RBP10.45□□□□□ -0.74
BRCA1-205ENST00000461221 MVPQ14764 893 aaKnown RBP10.45□□□□□ -0.74
BRCA1-205ENST00000461221 URI1O94763 535 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-205ENST00000461221 TSNARE1Q96NA8 513 aa10.44□□□□□ -0.74
BRCA1-205ENST00000461221 COMMD10Q9Y6G5 202 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms