RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 DLG5Q8TDM6 1919 aa19.33■□□□□ 0.68
COL5A3-202ENST00000461214 PDGFDQ9GZP0 370 aaPredicted RBP19.32■□□□□ 0.68
COL5A3-202ENST00000461214 CRB1P82279 1406 aa19.32■□□□□ 0.68
COL5A3-202ENST00000461214 HSP90AB2PQ58FF8 381 aa19.31■□□□□ 0.68
COL5A3-202ENST00000461214 ANO8Q9HCE9 1232 aaPredicted RBP19.31■□□□□ 0.68
COL5A3-202ENST00000461214 ATF5Q9Y2D1 282 aaPredicted RBP19.31■□□□□ 0.68
COL5A3-202ENST00000461214 WDR17Q8IZU2 1322 aa19.3■□□□□ 0.68
COL5A3-202ENST00000461214 BARGINQ6ZT62 677 aa19.3■□□□□ 0.68
COL5A3-202ENST00000461214 AXIN2Q9Y2T1 843 aa19.3■□□□□ 0.68
COL5A3-202ENST00000461214 LRRC37A3O60309 1634 aa19.29■□□□□ 0.68
COL5A3-202ENST00000461214 DIAPH1O60610 1272 aaKnown RBP19.29■□□□□ 0.68
COL5A3-202ENST00000461214 MIER1Q8N108 512 aa19.29■□□□□ 0.68
COL5A3-202ENST00000461214 ANKRD24Q8TF21 1146 aa19.29■□□□□ 0.68
COL5A3-202ENST00000461214 PLEKHG2Q9H7P9 1386 aa19.29■□□□□ 0.68
COL5A3-202ENST00000461214 EIF4A2Q14240 407 aaKnown RBP19.28■□□□□ 0.68
COL5A3-202ENST00000461214 LARP1Q6PKG0 1096 aaKnown RBP19.28■□□□□ 0.68
COL5A3-202ENST00000461214 BCL11BQ9C0K0 894 aaPredicted RBP19.28■□□□□ 0.68
COL5A3-202ENST00000461214 IGSF1Q8N6C5 1336 aa19.27■□□□□ 0.68
COL5A3-202ENST00000461214 TCP11L2Q8N4U5 519 aa19.27■□□□□ 0.68
COL5A3-202ENST00000461214 MRS2Q9HD23 443 aa19.27■□□□□ 0.68
COL5A3-202ENST00000461214 KDRP35968 1356 aa19.27■□□□□ 0.68
COL5A3-202ENST00000461214 IL13P35225 146 aa19.26■□□□□ 0.67
COL5A3-202ENST00000461214 FHDC1Q9C0D6 1143 aaPredicted RBP19.26■□□□□ 0.67
COL5A3-202ENST00000461214 NUDCQ9Y266 331 aa19.26■□□□□ 0.67
COL5A3-202ENST00000461214 CASZ1Q86V15 1759 aa19.25■□□□□ 0.67
COL5A3-202ENST00000461214 PTGER2P43116 358 aa19.25■□□□□ 0.67
COL5A3-202ENST00000461214 SYT17Q9BSW7 474 aa19.25■□□□□ 0.67
COL5A3-202ENST00000461214 CSB-PGBD3P0DP91 1061 aa19.23■□□□□ 0.67
COL5A3-202ENST00000461214 GIGYF1O75420 1035 aaPredicted RBP19.22■□□□□ 0.67
COL5A3-202ENST00000461214 CCDC184Q52MB2 194 aa19.22■□□□□ 0.67
COL5A3-202ENST00000461214 LTV1Q96GA3 475 aaPredicted RBP19.22■□□□□ 0.67
COL5A3-202ENST00000461214 CHD4Q14839 1912 aa19.21■□□□□ 0.67
COL5A3-202ENST00000461214 WDR43Q15061 677 aaKnown RBP eCLIP19.21■□□□□ 0.67
COL5A3-202ENST00000461214 PTF1AQ7RTS3 328 aa19.21■□□□□ 0.67
COL5A3-202ENST00000461214 SCN11AQ9UI33 1791 aa19.21■□□□□ 0.67
COL5A3-202ENST00000461214 PLSCR1O15162 318 aa19.2■□□□□ 0.66
COL5A3-202ENST00000461214 TOM1L2Q6ZVM7 507 aa19.2■□□□□ 0.66
COL5A3-202ENST00000461214 EYA1Q99502 592 aa19.2■□□□□ 0.66
COL5A3-202ENST00000461214 CARD10Q9BWT7 1032 aa19.2■□□□□ 0.66
COL5A3-202ENST00000461214 MEGF6O75095 1541 aa19.2■□□□□ 0.66
COL5A3-202ENST00000461214 NLRP2Q9NX02 1062 aa19.19■□□□□ 0.66
COL5A3-202ENST00000461214 OVOS2A0A0G2JMS6 1433 aa19.18■□□□□ 0.66
COL5A3-202ENST00000461214 ADAMTS7Q9UKP4 1686 aa19.18■□□□□ 0.66
COL5A3-202ENST00000461214 U2SURPO15042 1029 aaKnown RBP19.18■□□□□ 0.66
COL5A3-202ENST00000461214 NBPF6Q5VWK0 638 aa19.18■□□□□ 0.66
COL5A3-202ENST00000461214 PNISRQ8TF01 805 aaKnown RBP19.18■□□□□ 0.66
COL5A3-202ENST00000461214 NBPF4Q96M43 638 aa19.18■□□□□ 0.66
COL5A3-202ENST00000461214 STK32BQ9NY57 414 aa19.18■□□□□ 0.66
COL5A3-202ENST00000461214 THRAP3Q9Y2W1 955 aaKnown RBP19.18■□□□□ 0.66
COL5A3-202ENST00000461214 U2AF1L5P0DN76 240 aaPredicted RBP19.16■□□□□ 0.66
COL5A3-202ENST00000461214 U2AF1Q01081 240 aaKnown RBP eCLIP19.16■□□□□ 0.66
COL5A3-202ENST00000461214 GPR162Q16538 588 aa19.16■□□□□ 0.66
COL5A3-202ENST00000461214 TNS2Q63HR2 1409 aa19.16■□□□□ 0.66
COL5A3-202ENST00000461214 SIPA1L3O60292 1781 aaPredicted RBP19.15■□□□□ 0.66
COL5A3-202ENST00000461214 FCHSD2O94868 740 aa19.15■□□□□ 0.66
COL5A3-202ENST00000461214 PROM2Q8N271 834 aa19.15■□□□□ 0.66
COL5A3-202ENST00000461214 PNNQ9H307 717 aaKnown RBP19.15■□□□□ 0.66
COL5A3-202ENST00000461214 SBF2Q86WG5 1849 aa19.15■□□□□ 0.66
COL5A3-202ENST00000461214 DOT1LQ8TEK3 1739 aa19.14■□□□□ 0.66
COL5A3-202ENST00000461214 RGPD3A6NKT7 1758 aaPredicted RBP19.14■□□□□ 0.66
COL5A3-202ENST00000461214 RGPD4Q7Z3J3 1758 aa19.14■□□□□ 0.66
COL5A3-202ENST00000461214 ITGB4P16144 1822 aa19.14■□□□□ 0.65
COL5A3-202ENST00000461214 SULT6B1Q6IMI4 303 aa19.14■□□□□ 0.65
COL5A3-202ENST00000461214 RSPH6AQ9H0K4 717 aa19.14■□□□□ 0.65
COL5A3-202ENST00000461214 DDB1Q16531 1140 aa19.13■□□□□ 0.65
COL5A3-202ENST00000461214 PELP1Q8IZL8 1130 aaKnown RBP19.13■□□□□ 0.65
COL5A3-202ENST00000461214 CDCA7Q9BWT1 371 aaPredicted RBP19.13■□□□□ 0.65
COL5A3-202ENST00000461214 MTFR1LQ9H019 292 aa19.13■□□□□ 0.65
COL5A3-202ENST00000461214 UTRNP46939 3433 aa19.13■□□□□ 0.65
COL5A3-202ENST00000461214 TOGARAM1Q9Y4F4 1720 aa19.12■□□□□ 0.65
COL5A3-202ENST00000461214 SLC15A2Q16348 729 aa19.12■□□□□ 0.65
COL5A3-202ENST00000461214 KLHL34Q8N239 644 aa19.12■□□□□ 0.65
COL5A3-202ENST00000461214 USHBP1Q8N6Y0 703 aa19.12■□□□□ 0.65
COL5A3-202ENST00000461214 HMOX1P09601 288 aa19.11■□□□□ 0.65
COL5A3-202ENST00000461214 IL2RBP14784 551 aa19.11■□□□□ 0.65
COL5A3-202ENST00000461214 AEBP1Q8IUX7 1158 aa19.11■□□□□ 0.65
COL5A3-202ENST00000461214 RAPGEF4Q8WZA2 1011 aa19.11■□□□□ 0.65
COL5A3-202ENST00000461214 ARXQ96QS3 562 aa19.11■□□□□ 0.65
COL5A3-202ENST00000461214 TXNRD1Q16881 649 aa19.1■□□□□ 0.65
COL5A3-202ENST00000461214 ADAMTS8Q9UP79 889 aa19.1■□□□□ 0.65
COL5A3-202ENST00000461214 NEFMP07197 916 aa19.09■□□□□ 0.65
COL5A3-202ENST00000461214 TATP17735 454 aaPredicted RBP19.09■□□□□ 0.65
COL5A3-202ENST00000461214 PRKAR2BP31323 418 aa19.09■□□□□ 0.65
COL5A3-202ENST00000461214 MAPK8IP3Q9UPT6 1336 aa19.08■□□□□ 0.65
COL5A3-202ENST00000461214 FAM9BQ8IZU0 186 aa19.08■□□□□ 0.64
COL5A3-202ENST00000461214 PLEKHF1Q96S99 279 aa19.08■□□□□ 0.64
COL5A3-202ENST00000461214 SGIP1Q9BQI5 828 aa19.08■□□□□ 0.64
COL5A3-202ENST00000461214 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.08■□□□□ 0.64
COL5A3-202ENST00000461214 NHSQ6T4R5 1651 aa19.08■□□□□ 0.64
COL5A3-202ENST00000461214 MARCH10Q8NA82 808 aaPredicted RBP19.07■□□□□ 0.64
COL5A3-202ENST00000461214 RUNDC1Q96C34 613 aa19.07■□□□□ 0.64
COL5A3-202ENST00000461214 AMOTQ4VCS5 1084 aa19.06■□□□□ 0.64
COL5A3-202ENST00000461214 PCDH11XQ9BZA7 1347 aa19.05■□□□□ 0.64
COL5A3-202ENST00000461214 PCDH11YQ9BZA8 1340 aa19.05■□□□□ 0.64
COL5A3-202ENST00000461214 PAPPAQ13219 1627 aa19.04■□□□□ 0.64
COL5A3-202ENST00000461214 KAT6BQ8WYB5 2073 aa19.04■□□□□ 0.64
COL5A3-202ENST00000461214 SPG7Q9UQ90 795 aa19.04■□□□□ 0.64
COL5A3-202ENST00000461214 KDM3BQ7LBC6 1761 aa19.04■□□□□ 0.64
COL5A3-202ENST00000461214 MRC1P22897 1456 aa19.03■□□□□ 0.64
COL5A3-202ENST00000461214 PLEKHO1Q53GL0 409 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms