RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 SBF2Q86WG5 1849 aa18.82■□□□□ 0.6
HDLBP-229ENST00000460826 KAT6BQ8WYB5 2073 aa18.82■□□□□ 0.6
HDLBP-229ENST00000460826 SULT6B1Q6IMI4 303 aa18.82■□□□□ 0.6
HDLBP-229ENST00000460826 KDRP35968 1356 aa18.81■□□□□ 0.6
HDLBP-229ENST00000460826 SOCS7O14512 581 aa18.81■□□□□ 0.6
HDLBP-229ENST00000460826 U2SURPO15042 1029 aaKnown RBP18.81■□□□□ 0.6
HDLBP-229ENST00000460826 HMOX1P09601 288 aa18.8■□□□□ 0.6
HDLBP-229ENST00000460826 ZCRB1Q8TBF4 217 aaKnown RBP18.79■□□□□ 0.6
HDLBP-229ENST00000460826 ANP32CO43423 234 aa18.78■□□□□ 0.6
HDLBP-229ENST00000460826 DDX54Q8TDD1 881 aaKnown RBP18.77■□□□□ 0.6
HDLBP-229ENST00000460826 NUDCQ9Y266 331 aa18.76■□□□□ 0.59
HDLBP-229ENST00000460826 TNS1Q9HBL0 1735 aaKnown RBP18.75■□□□□ 0.59
HDLBP-229ENST00000460826 CYP27B1O15528 508 aa18.75■□□□□ 0.59
HDLBP-229ENST00000460826 CCDC184Q52MB2 194 aa18.75■□□□□ 0.59
HDLBP-229ENST00000460826 FAM196AQ6ZSG2 479 aa18.75■□□□□ 0.59
HDLBP-229ENST00000460826 UPF1Q92900 1129 aaKnown RBP eCLIP18.75■□□□□ 0.59
HDLBP-229ENST00000460826 DOT1LQ8TEK3 1739 aa18.74■□□□□ 0.59
HDLBP-229ENST00000460826 U2AF1L5P0DN76 240 aaPredicted RBP18.74■□□□□ 0.59
HDLBP-229ENST00000460826 U2AF1Q01081 240 aaKnown RBP eCLIP18.74■□□□□ 0.59
HDLBP-229ENST00000460826 PLEKHG2Q9H7P9 1386 aa18.73■□□□□ 0.59
HDLBP-229ENST00000460826 RSPH6AQ9H0K4 717 aa18.73■□□□□ 0.59
HDLBP-229ENST00000460826 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.73■□□□□ 0.592e-10■□□□□ 9.4
HDLBP-229ENST00000460826 SPG7Q9UQ90 795 aa18.73■□□□□ 0.59
HDLBP-229ENST00000460826 TOGARAM1Q9Y4F4 1720 aa18.73■□□□□ 0.59
HDLBP-229ENST00000460826 BCL9O00512 1426 aa18.73■□□□□ 0.59
HDLBP-229ENST00000460826 PCDH11XQ9BZA7 1347 aa18.73■□□□□ 0.59
HDLBP-229ENST00000460826 PCDH11YQ9BZA8 1340 aa18.73■□□□□ 0.59
HDLBP-229ENST00000460826 NHSQ6T4R5 1651 aa18.72■□□□□ 0.59
HDLBP-229ENST00000460826 VIRMAQ69YN4 1812 aaKnown RBP18.72■□□□□ 0.59
HDLBP-229ENST00000460826 PLEKHO1Q53GL0 409 aaPredicted RBP18.71■□□□□ 0.59
HDLBP-229ENST00000460826 PTF1AQ7RTS3 328 aa18.71■□□□□ 0.59
HDLBP-229ENST00000460826 ITGB4P16144 1822 aa18.7■□□□□ 0.58
HDLBP-229ENST00000460826 TRIM37O94972 964 aa18.7■□□□□ 0.58
HDLBP-229ENST00000460826 PRKAR2BP31323 418 aa18.7■□□□□ 0.58
HDLBP-229ENST00000460826 ZNF530Q6P9A1 599 aaPredicted RBP18.7■□□□□ 0.58
HDLBP-229ENST00000460826 ACSBG1Q96GR2 724 aa18.7■□□□□ 0.58
HDLBP-229ENST00000460826 PHKG2P15735 406 aa18.69■□□□□ 0.58
HDLBP-229ENST00000460826 AMOTQ4VCS5 1084 aa18.69■□□□□ 0.58
HDLBP-229ENST00000460826 PHACTR3Q96KR7 559 aa18.69■□□□□ 0.58
HDLBP-229ENST00000460826 KCNQ2O43526 872 aa18.68■□□□□ 0.58
HDLBP-229ENST00000460826 FCHSD2O94868 740 aa18.68■□□□□ 0.58
HDLBP-229ENST00000460826 MTHFSDQ2M296 383 aaKnown RBP18.68■□□□□ 0.58
HDLBP-229ENST00000460826 BTAF1O14981 1849 aa18.67■□□□□ 0.58
HDLBP-229ENST00000460826 IFNL2Q8IZJ0 200 aa18.67■□□□□ 0.58
HDLBP-229ENST00000460826 DLG5Q8TDM6 1919 aa18.66■□□□□ 0.58
HDLBP-229ENST00000460826 SCN11AQ9UI33 1791 aa18.66■□□□□ 0.58
HDLBP-229ENST00000460826 NKX1-1Q15270 411 aaPredicted RBP18.66■□□□□ 0.58
HDLBP-229ENST00000460826 DIEXFQ68CQ4 756 aaKnown RBP18.66■□□□□ 0.58
HDLBP-229ENST00000460826 KDM6AO15550 1401 aaPredicted RBP18.65■□□□□ 0.58
HDLBP-229ENST00000460826 WDR43Q15061 677 aaKnown RBP eCLIP18.64■□□□□ 0.57
HDLBP-229ENST00000460826 PLEKHF1Q96S99 279 aa18.64■□□□□ 0.57
HDLBP-229ENST00000460826 MRS2Q9HD23 443 aa18.64■□□□□ 0.57
HDLBP-229ENST00000460826 PRIM1P49642 420 aaKnown RBP18.63■□□□□ 0.57
HDLBP-229ENST00000460826 C1orf141Q5JVX7 400 aa18.63■□□□□ 0.57
HDLBP-229ENST00000460826 DEFB132Q7Z7B7 95 aa18.63■□□□□ 0.57
HDLBP-229ENST00000460826 CCDC125Q86Z20 511 aa18.63■□□□□ 0.57
HDLBP-229ENST00000460826 BCL11BQ9C0K0 894 aaPredicted RBP18.63■□□□□ 0.57
HDLBP-229ENST00000460826 ADAMTS8Q9UP79 889 aa18.63■□□□□ 0.57
HDLBP-229ENST00000460826 ADAMTS7Q9UKP4 1686 aa18.63■□□□□ 0.57
HDLBP-229ENST00000460826 AKAP4Q5JQC9 854 aa18.62■□□□□ 0.57
HDLBP-229ENST00000460826 APBA3O96018 575 aa18.61■□□□□ 0.57
HDLBP-229ENST00000460826 SF3B2Q13435 895 aaKnown RBP18.61■□□□□ 0.57
HDLBP-229ENST00000460826 MPRIPQ6WCQ1 1025 aa18.61■□□□□ 0.57
HDLBP-229ENST00000460826 GAS2L2Q8NHY3 880 aa18.61■□□□□ 0.57
HDLBP-229ENST00000460826 SYTL4Q96C24 671 aaPredicted RBP18.61■□□□□ 0.57
HDLBP-229ENST00000460826 CCDC146Q8IYE0 955 aa18.6■□□□□ 0.57
HDLBP-229ENST00000460826 MAP3K5Q99683 1374 aa18.59■□□□□ 0.57
HDLBP-229ENST00000460826 HSP90AB1P08238 724 aaKnown RBP18.59■□□□□ 0.57
HDLBP-229ENST00000460826 EN1Q05925 392 aaPredicted RBP18.59■□□□□ 0.57
HDLBP-229ENST00000460826 PNISRQ8TF01 805 aaKnown RBP18.59■□□□□ 0.57
HDLBP-229ENST00000460826 DCAF5Q96JK2 942 aa18.59■□□□□ 0.57
HDLBP-229ENST00000460826 LGR6Q9HBX8 967 aa18.59■□□□□ 0.57
HDLBP-229ENST00000460826 RGPD3A6NKT7 1758 aaPredicted RBP18.59■□□□□ 0.57
HDLBP-229ENST00000460826 RGPD4Q7Z3J3 1758 aa18.59■□□□□ 0.57
HDLBP-229ENST00000460826 BAG6P46379 1132 aa18.58■□□□□ 0.56
HDLBP-229ENST00000460826 RREB1Q92766 1687 aa18.57■□□□□ 0.56
HDLBP-229ENST00000460826 RNMTO43148 476 aaKnown RBP18.57■□□□□ 0.56
HDLBP-229ENST00000460826 PIGBQ92521 554 aa18.57■□□□□ 0.56
HDLBP-229ENST00000460826 MAPK8IP3Q9UPT6 1336 aa18.56■□□□□ 0.56
HDLBP-229ENST00000460826 SIPA1L3O60292 1781 aaPredicted RBP18.56■□□□□ 0.56
HDLBP-229ENST00000460826 GNAT3A8MTJ3 354 aa18.56■□□□□ 0.56
HDLBP-229ENST00000460826 MIER1Q8N108 512 aa18.56■□□□□ 0.56
HDLBP-229ENST00000460826 CAMKK2Q96RR4 588 aa18.56■□□□□ 0.56
HDLBP-229ENST00000460826 PNNQ9H307 717 aaKnown RBP18.56■□□□□ 0.56
HDLBP-229ENST00000460826 LY75O60449 1722 aa18.56■□□□□ 0.56
HDLBP-229ENST00000460826 MRC1P22897 1456 aa18.55■□□□□ 0.56
HDLBP-229ENST00000460826 ERVV-2B6SEH9 535 aa18.55■□□□□ 0.56
HDLBP-229ENST00000460826 NEFMP07197 916 aa18.55■□□□□ 0.56
HDLBP-229ENST00000460826 EZH2Q15910 746 aaKnown RBP18.55■□□□□ 0.56
HDLBP-229ENST00000460826 NFE2L2Q16236 605 aa18.55■□□□□ 0.56
HDLBP-229ENST00000460826 IL17REQ8NFR9 667 aa18.55■□□□□ 0.56
HDLBP-229ENST00000460826 RUNDC1Q96C34 613 aa18.55■□□□□ 0.56
HDLBP-229ENST00000460826 NUP188Q5SRE5 1749 aa18.54■□□□□ 0.56
HDLBP-229ENST00000460826 TMOD3Q9NYL9 352 aa18.54■□□□□ 0.56
HDLBP-229ENST00000460826 PLSCR1O15162 318 aa18.53■□□□□ 0.56
HDLBP-229ENST00000460826 CCER2I3L3R5 266 aa18.52■□□□□ 0.56
HDLBP-229ENST00000460826 CABP4P57796 275 aa18.52■□□□□ 0.56
HDLBP-229ENST00000460826 DCTN1Q14203 1278 aa18.52■□□□□ 0.56
HDLBP-229ENST00000460826 MCM10Q7L590 875 aa18.52■□□□□ 0.56
HDLBP-229ENST00000460826 PROM2Q8N271 834 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms