RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 ABCA3Q99758 1704 aa14.63□□□□□ -0.07
SMNDC1-203ENST00000460483 BCL9LQ86UU0 1499 aa14.63□□□□□ -0.07
SMNDC1-203ENST00000460483 TATP17735 454 aaPredicted RBP14.62□□□□□ -0.07
SMNDC1-203ENST00000460483 RBM6P78332 1123 aaKnown RBP14.62□□□□□ -0.07
SMNDC1-203ENST00000460483 AMOTQ4VCS5 1084 aa14.62□□□□□ -0.07
SMNDC1-203ENST00000460483 BARGINQ6ZT62 677 aa14.62□□□□□ -0.07
SMNDC1-203ENST00000460483 EYA1Q99502 592 aa14.62□□□□□ -0.07
SMNDC1-203ENST00000460483 USP35Q9P2H5 1018 aa14.62□□□□□ -0.07
SMNDC1-203ENST00000460483 SPATA31A1Q5TZJ5 1347 aa14.62□□□□□ -0.07
SMNDC1-203ENST00000460483 SPATA31A5Q5VU36 1347 aa14.62□□□□□ -0.07
SMNDC1-203ENST00000460483 SPATA31A7Q8IWB4 1347 aa14.62□□□□□ -0.07
SMNDC1-203ENST00000460483 IGSF1Q8N6C5 1336 aa14.62□□□□□ -0.07
SMNDC1-203ENST00000460483 MARF1Q9Y4F3 1742 aaKnown RBP14.61□□□□□ -0.07
SMNDC1-203ENST00000460483 IL2RBP14784 551 aa14.61□□□□□ -0.07
SMNDC1-203ENST00000460483 RXRBP28702 533 aa14.61□□□□□ -0.07
SMNDC1-203ENST00000460483 EVX2Q03828 476 aa14.61□□□□□ -0.07
SMNDC1-203ENST00000460483 NBPF6Q5VWK0 638 aa14.61□□□□□ -0.07
SMNDC1-203ENST00000460483 SULT6B1Q6IMI4 303 aa14.61□□□□□ -0.07
SMNDC1-203ENST00000460483 MIER1Q8N108 512 aa14.61□□□□□ -0.07
SMNDC1-203ENST00000460483 NBPF4Q96M43 638 aa14.61□□□□□ -0.07
SMNDC1-203ENST00000460483 MAPK8IP3Q9UPT6 1336 aa14.61□□□□□ -0.07
SMNDC1-203ENST00000460483 A0A0G2JS52 829 aa14.6□□□□□ -0.07
SMNDC1-203ENST00000460483 MYT1Q01538 1121 aa14.6□□□□□ -0.07
SMNDC1-203ENST00000460483 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.6□□□□□ -0.076e-8■■■□□ 14.6
SMNDC1-203ENST00000460483 SPG7Q9UQ90 795 aa14.6□□□□□ -0.07
SMNDC1-203ENST00000460483 NWD2Q9ULI1 1742 aa14.6□□□□□ -0.07
SMNDC1-203ENST00000460483 PLEKHO1Q53GL0 409 aaPredicted RBP14.59□□□□□ -0.07
SMNDC1-203ENST00000460483 LMO7Q8WWI1 1683 aa14.58□□□□□ -0.07
SMNDC1-203ENST00000460483 ATRNO75882 1429 aa14.58□□□□□ -0.07
SMNDC1-203ENST00000460483 EXOC5O00471 708 aa14.58□□□□□ -0.08
SMNDC1-203ENST00000460483 PNISRQ8TF01 805 aaKnown RBP14.58□□□□□ -0.08
SMNDC1-203ENST00000460483 LTN1O94822 1766 aa14.57□□□□□ -0.08
SMNDC1-203ENST00000460483 NGEFQ8N5V2 710 aa14.57□□□□□ -0.08
SMNDC1-203ENST00000460483 KDRP35968 1356 aa14.57□□□□□ -0.08
SMNDC1-203ENST00000460483 ONECUT3O60422 494 aaPredicted RBP14.56□□□□□ -0.08
SMNDC1-203ENST00000460483 HSP90AB1P08238 724 aaKnown RBP14.56□□□□□ -0.08
SMNDC1-203ENST00000460483 HMOX1P09601 288 aa14.56□□□□□ -0.08
SMNDC1-203ENST00000460483 PDE3BQ13370 1112 aa14.56□□□□□ -0.08
SMNDC1-203ENST00000460483 DDB1Q16531 1140 aa14.56□□□□□ -0.08
SMNDC1-203ENST00000460483 GAS2L2Q8NHY3 880 aa14.56□□□□□ -0.08
SMNDC1-203ENST00000460483 COL3A1P02461 1466 aaPredicted RBP14.56□□□□□ -0.08
SMNDC1-203ENST00000460483 FAM208AQ9UK61 1670 aaKnown RBP14.55□□□□□ -0.08
SMNDC1-203ENST00000460483 MAP2P11137 1827 aaKnown RBP14.55□□□□□ -0.08
SMNDC1-203ENST00000460483 PRR29P0C7W0 189 aa14.55□□□□□ -0.08
SMNDC1-203ENST00000460483 FAM98CQ17RN3 349 aaKnown RBP14.55□□□□□ -0.08
SMNDC1-203ENST00000460483 C1orf141Q5JVX7 400 aa14.55□□□□□ -0.08
SMNDC1-203ENST00000460483 FAM9BQ8IZU0 186 aa14.55□□□□□ -0.08
SMNDC1-203ENST00000460483 ZCRB1Q8TBF4 217 aaKnown RBP14.55□□□□□ -0.08
SMNDC1-203ENST00000460483 RUNDC1Q96C34 613 aa14.55□□□□□ -0.08
SMNDC1-203ENST00000460483 COL18A1P39060 1754 aa14.55□□□□□ -0.08
SMNDC1-203ENST00000460483 PRKAR2BP31323 418 aa14.54□□□□□ -0.08
SMNDC1-203ENST00000460483 LMOD3Q0VAK6 560 aa14.54□□□□□ -0.08
SMNDC1-203ENST00000460483 USHBP1Q8N6Y0 703 aa14.54□□□□□ -0.08
SMNDC1-203ENST00000460483 ADAMTS8Q9UP79 889 aa14.54□□□□□ -0.08
SMNDC1-203ENST00000460483 PLCH1Q4KWH8 1693 aa14.54□□□□□ -0.08
SMNDC1-203ENST00000460483 PEAK1Q9H792 1746 aa14.54□□□□□ -0.08
SMNDC1-203ENST00000460483 NCAPD2Q15021 1401 aa14.53□□□□□ -0.08
SMNDC1-203ENST00000460483 PCDH11XQ9BZA7 1347 aa14.53□□□□□ -0.08
SMNDC1-203ENST00000460483 PCDH11YQ9BZA8 1340 aa14.53□□□□□ -0.08
SMNDC1-203ENST00000460483 RSPH6AQ9H0K4 717 aa14.53□□□□□ -0.08
SMNDC1-203ENST00000460483 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.52□□□□□ -0.08
SMNDC1-203ENST00000460483 CHADLQ6NUI6 762 aa14.52□□□□□ -0.09
SMNDC1-203ENST00000460483 IFNL2Q8IZJ0 200 aa14.52□□□□□ -0.09
SMNDC1-203ENST00000460483 RTF1Q92541 710 aaKnown RBP14.52□□□□□ -0.09
SMNDC1-203ENST00000460483 SEPT12Q8IYM1 358 aa14.51□□□□□ -0.09
SMNDC1-203ENST00000460483 HTATSF1O43719 755 aaKnown RBP14.5□□□□□ -0.09
SMNDC1-203ENST00000460483 CALD1Q05682 793 aaKnown RBP14.5□□□□□ -0.09
SMNDC1-203ENST00000460483 AEBP1Q8IUX7 1158 aa14.5□□□□□ -0.09
SMNDC1-203ENST00000460483 OVOS2A0A0G2JMS6 1433 aa14.49□□□□□ -0.09
SMNDC1-203ENST00000460483 CCDC184Q52MB2 194 aa14.49□□□□□ -0.09
SMNDC1-203ENST00000460483 AKAP4Q5JQC9 854 aa14.49□□□□□ -0.09
SMNDC1-203ENST00000460483 RGS17Q9UGC6 210 aaPredicted RBP14.49□□□□□ -0.09
SMNDC1-203ENST00000460483 NRAPQ86VF7 1730 aa14.49□□□□□ -0.09
SMNDC1-203ENST00000460483 ZNF530Q6P9A1 599 aaPredicted RBP14.48□□□□□ -0.09
SMNDC1-203ENST00000460483 POTEAQ6S8J7 498 aa14.48□□□□□ -0.09
SMNDC1-203ENST00000460483 DDX54Q8TDD1 881 aaKnown RBP14.48□□□□□ -0.09
SMNDC1-203ENST00000460483 GNAT3A8MTJ3 354 aa14.47□□□□□ -0.09
SMNDC1-203ENST00000460483 HMGB2P26583 209 aaKnown RBP14.47□□□□□ -0.09
SMNDC1-203ENST00000460483 NFE2L2Q16236 605 aa14.47□□□□□ -0.09
SMNDC1-203ENST00000460483 KRT27Q7Z3Y8 459 aa14.47□□□□□ -0.09
SMNDC1-203ENST00000460483 DCAF5Q96JK2 942 aa14.47□□□□□ -0.09
SMNDC1-203ENST00000460483 PLEKHF1Q96S99 279 aa14.47□□□□□ -0.09
SMNDC1-203ENST00000460483 DISP2A7MBM2 1401 aa14.47□□□□□ -0.09
SMNDC1-203ENST00000460483 MTHFSDQ2M296 383 aaKnown RBP14.46□□□□□ -0.09
SMNDC1-203ENST00000460483 FAM196AQ6ZSG2 479 aa14.46□□□□□ -0.09
SMNDC1-203ENST00000460483 TNS2Q63HR2 1409 aa14.46□□□□□ -0.09
SMNDC1-203ENST00000460483 C19orf67A6NJJ6 358 aa14.45□□□□□ -0.1
SMNDC1-203ENST00000460483 PHKG2P15735 406 aa14.45□□□□□ -0.1
SMNDC1-203ENST00000460483 RIPK4P57078 832 aa14.45□□□□□ -0.1
SMNDC1-203ENST00000460483 CCDC146Q8IYE0 955 aa14.45□□□□□ -0.1
SMNDC1-203ENST00000460483 APAF1O14727 1248 aa14.44□□□□□ -0.1
SMNDC1-203ENST00000460483 TMPOP42166 694 aaKnown RBP14.44□□□□□ -0.1
SMNDC1-203ENST00000460483 NKX1-1Q15270 411 aaPredicted RBP14.44□□□□□ -0.1
SMNDC1-203ENST00000460483 MEGF6O75095 1541 aa14.44□□□□□ -0.1
SMNDC1-203ENST00000460483 CCDC27Q2M243 656 aa14.43□□□□□ -0.1
SMNDC1-203ENST00000460483 PHACTR3Q96KR7 559 aa14.43□□□□□ -0.1
SMNDC1-203ENST00000460483 MAP3K5Q99683 1374 aa14.43□□□□□ -0.1
SMNDC1-203ENST00000460483 RGPD1P0DJD0 1748 aa14.43□□□□□ -0.1
SMNDC1-203ENST00000460483 ERVV-2B6SEH9 535 aa14.42□□□□□ -0.1
SMNDC1-203ENST00000460483 TEFQ10587 303 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms