RNA–Protein interactions for RNA: ENST00000460390.6

EXD3-202, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 2

Gene EXD3, Length 1,432 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-202ENST00000460390 DIAPH1O60610 1272 aaKnown RBP25.6■■□□□ 1.69
EXD3-202ENST00000460390 USHBP1Q8N6Y0 703 aa25.6■■□□□ 1.69
EXD3-202ENST00000460390 PRKRIP1Q9H875 184 aaPredicted RBP25.6■■□□□ 1.69
EXD3-202ENST00000460390 MYBBP1AQ9BQG0 1328 aaKnown RBP25.6■■□□□ 1.69
EXD3-202ENST00000460390 OVOS2A0A0G2JMS6 1433 aa25.59■■□□□ 1.69
EXD3-202ENST00000460390 LRRC37A3O60309 1634 aa25.59■■□□□ 1.69
EXD3-202ENST00000460390 IL13P35225 146 aa25.58■■□□□ 1.69
EXD3-202ENST00000460390 DDB1Q16531 1140 aa25.58■■□□□ 1.69
EXD3-202ENST00000460390 RAPGEF4Q8WZA2 1011 aa25.58■■□□□ 1.69
EXD3-202ENST00000460390 NCAPD2Q15021 1401 aa25.57■■□□□ 1.68
EXD3-202ENST00000460390 COL3A1P02461 1466 aaPredicted RBP25.57■■□□□ 1.68
EXD3-202ENST00000460390 ANP32CO43423 234 aa25.56■■□□□ 1.68
EXD3-202ENST00000460390 IGSF1Q8N6C5 1336 aa25.56■■□□□ 1.68
EXD3-202ENST00000460390 EXOC5O00471 708 aa25.55■■□□□ 1.68
EXD3-202ENST00000460390 TATP17735 454 aaPredicted RBP25.54■■□□□ 1.68
EXD3-202ENST00000460390 NUDCQ9Y266 331 aa25.54■■□□□ 1.68
EXD3-202ENST00000460390 TNS2Q63HR2 1409 aa25.53■■□□□ 1.68
EXD3-202ENST00000460390 RGPD3A6NKT7 1758 aaPredicted RBP25.53■■□□□ 1.68
EXD3-202ENST00000460390 RGPD4Q7Z3J3 1758 aa25.53■■□□□ 1.68
EXD3-202ENST00000460390 MEGF6O75095 1541 aa25.52■■□□□ 1.68
EXD3-202ENST00000460390 U2SURPO15042 1029 aaKnown RBP25.5■■□□□ 1.67
EXD3-202ENST00000460390 SULT6B1Q6IMI4 303 aa25.5■■□□□ 1.67
EXD3-202ENST00000460390 PPP1R1BQ9UD71 204 aaPredicted RBP25.5■■□□□ 1.67
EXD3-202ENST00000460390 SBF2Q86WG5 1849 aa25.49■■□□□ 1.67
EXD3-202ENST00000460390 PLEKHG2Q9H7P9 1386 aa25.49■■□□□ 1.67
EXD3-202ENST00000460390 KDRP35968 1356 aa25.48■■□□□ 1.67
EXD3-202ENST00000460390 ZCRB1Q8TBF4 217 aaKnown RBP25.47■■□□□ 1.67
EXD3-202ENST00000460390 SPON1Q9HCB6 807 aa25.46■■□□□ 1.67
EXD3-202ENST00000460390 PKD1L3Q7Z443 1732 aa25.46■■□□□ 1.67
EXD3-202ENST00000460390 AEBP1Q8IUX7 1158 aa25.46■■□□□ 1.67
EXD3-202ENST00000460390 SHANK3Q9BYB0 1731 aa25.45■■□□□ 1.66
EXD3-202ENST00000460390 SPG7Q9UQ90 795 aa25.45■■□□□ 1.66
EXD3-202ENST00000460390 HMOX1P09601 288 aa25.44■■□□□ 1.66
EXD3-202ENST00000460390 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.44■■□□□ 1.66
EXD3-202ENST00000460390 DCAF8L1A6NGE4 600 aa25.43■■□□□ 1.66
EXD3-202ENST00000460390 PLSCR1O15162 318 aa25.43■■□□□ 1.66
EXD3-202ENST00000460390 U2AF1L5P0DN76 240 aaPredicted RBP25.43■■□□□ 1.66
EXD3-202ENST00000460390 U2AF1Q01081 240 aaKnown RBP eCLIP25.43■■□□□ 1.66
EXD3-202ENST00000460390 MARCH10Q8NA82 808 aaPredicted RBP25.43■■□□□ 1.66
EXD3-202ENST00000460390 BCL11BQ9C0K0 894 aaPredicted RBP25.43■■□□□ 1.66
EXD3-202ENST00000460390 PCDH11XQ9BZA7 1347 aa25.42■■□□□ 1.66
EXD3-202ENST00000460390 PCDH11YQ9BZA8 1340 aa25.42■■□□□ 1.66
EXD3-202ENST00000460390 DDX54Q8TDD1 881 aaKnown RBP25.42■■□□□ 1.66
EXD3-202ENST00000460390 KAT6BQ8WYB5 2073 aa25.42■■□□□ 1.66
EXD3-202ENST00000460390 KCNQ2O43526 872 aa25.41■■□□□ 1.66
EXD3-202ENST00000460390 PLEKHO1Q53GL0 409 aaPredicted RBP25.41■■□□□ 1.66
EXD3-202ENST00000460390 AMOTQ4VCS5 1084 aa25.4■■□□□ 1.66
EXD3-202ENST00000460390 BCL9O00512 1426 aa25.38■■□□□ 1.65
EXD3-202ENST00000460390 FCHSD2O94868 740 aa25.37■■□□□ 1.65
EXD3-202ENST00000460390 WDR43Q15061 677 aaKnown RBP eCLIP25.35■■□□□ 1.65
EXD3-202ENST00000460390 RSPH6AQ9H0K4 717 aa25.35■■□□□ 1.65
EXD3-202ENST00000460390 PNNQ9H307 717 aaKnown RBP25.35■■□□□ 1.65
EXD3-202ENST00000460390 YY1P25490 414 aa25.34■■□□□ 1.65
EXD3-202ENST00000460390 DIEXFQ68CQ4 756 aaKnown RBP25.34■■□□□ 1.65
EXD3-202ENST00000460390 IFNL2Q8IZJ0 200 aa25.34■■□□□ 1.65
EXD3-202ENST00000460390 CYP27B1O15528 508 aa25.33■■□□□ 1.65
EXD3-202ENST00000460390 NEFMP07197 916 aa25.33■■□□□ 1.65
EXD3-202ENST00000460390 PRKAR2BP31323 418 aa25.33■■□□□ 1.65
EXD3-202ENST00000460390 CASZ1Q86V15 1759 aa25.33■■□□□ 1.65
EXD3-202ENST00000460390 C1orf141Q5JVX7 400 aa25.32■■□□□ 1.64
EXD3-202ENST00000460390 ZNF530Q6P9A1 599 aaPredicted RBP25.32■■□□□ 1.64
EXD3-202ENST00000460390 ANO8Q9HCE9 1232 aaPredicted RBP25.32■■□□□ 1.64
EXD3-202ENST00000460390 HSP90AB1P08238 724 aaKnown RBP25.3■■□□□ 1.64
EXD3-202ENST00000460390 PHKG2P15735 406 aa25.3■■□□□ 1.64
EXD3-202ENST00000460390 PTF1AQ7RTS3 328 aa25.3■■□□□ 1.64
EXD3-202ENST00000460390 STK32BQ9NY57 414 aa25.3■■□□□ 1.64
EXD3-202ENST00000460390 DOT1LQ8TEK3 1739 aa25.3■■□□□ 1.64
EXD3-202ENST00000460390 NHSQ6T4R5 1651 aa25.29■■□□□ 1.64
EXD3-202ENST00000460390 MRS2Q9HD23 443 aa25.29■■□□□ 1.64
EXD3-202ENST00000460390 GAS2L2Q8NHY3 880 aa25.29■■□□□ 1.64
EXD3-202ENST00000460390 NKX1-1Q15270 411 aaPredicted RBP25.28■■□□□ 1.64
EXD3-202ENST00000460390 TXNRD1Q16881 649 aa25.28■■□□□ 1.64
EXD3-202ENST00000460390 MTHFSDQ2M296 383 aaKnown RBP25.27■■□□□ 1.64
EXD3-202ENST00000460390 ACSBG1Q96GR2 724 aa25.27■■□□□ 1.64
EXD3-202ENST00000460390 AKAP4Q5JQC9 854 aa25.26■■□□□ 1.63
EXD3-202ENST00000460390 MAPK8IP3Q9UPT6 1336 aa25.25■■□□□ 1.63
EXD3-202ENST00000460390 ZBTB7AO95365 584 aa25.25■■□□□ 1.63
EXD3-202ENST00000460390 CCDC184Q52MB2 194 aa25.25■■□□□ 1.63
EXD3-202ENST00000460390 VIRMAQ69YN4 1812 aaKnown RBP25.24■■□□□ 1.63
EXD3-202ENST00000460390 PROM2Q8N271 834 aa25.24■■□□□ 1.63
EXD3-202ENST00000460390 PHACTR3Q96KR7 559 aa25.24■■□□□ 1.63
EXD3-202ENST00000460390 ITGB4P16144 1822 aa25.23■■□□□ 1.63
EXD3-202ENST00000460390 SYTL4Q96C24 671 aaPredicted RBP25.23■■□□□ 1.63
EXD3-202ENST00000460390 DCAF5Q96JK2 942 aa25.23■■□□□ 1.63
EXD3-202ENST00000460390 TOGARAM1Q9Y4F4 1720 aa25.23■■□□□ 1.63
EXD3-202ENST00000460390 SLC15A2Q16348 729 aa25.22■■□□□ 1.63
EXD3-202ENST00000460390 ADAMTS8Q9UP79 889 aa25.22■■□□□ 1.63
EXD3-202ENST00000460390 SCN11AQ9UI33 1791 aa25.22■■□□□ 1.63
EXD3-202ENST00000460390 PRIM1P49642 420 aaKnown RBP25.21■■□□□ 1.63
EXD3-202ENST00000460390 PLEKHF1Q96S99 279 aa25.21■■□□□ 1.63
EXD3-202ENST00000460390 BTAF1O14981 1849 aa25.21■■□□□ 1.63
EXD3-202ENST00000460390 MAP3K5Q99683 1374 aa25.2■■□□□ 1.62
EXD3-202ENST00000460390 PDGFDQ9GZP0 370 aaPredicted RBP25.2■■□□□ 1.62
EXD3-202ENST00000460390 GNAT3A8MTJ3 354 aa25.19■■□□□ 1.62
EXD3-202ENST00000460390 MPRIPQ6WCQ1 1025 aa25.19■■□□□ 1.62
EXD3-202ENST00000460390 PNISRQ8TF01 805 aaKnown RBP25.19■■□□□ 1.62
EXD3-202ENST00000460390 ATF5Q9Y2D1 282 aaPredicted RBP25.19■■□□□ 1.62
EXD3-202ENST00000460390 ERVV-2B6SEH9 535 aa25.18■■□□□ 1.62
EXD3-202ENST00000460390 RUNDC1Q96C34 613 aa25.18■■□□□ 1.62
EXD3-202ENST00000460390 KDM6AO15550 1401 aaPredicted RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms