RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 ZCRB1Q8TBF4 217 aaKnown RBP28.83■■■□□ 2.21
SRM-202ENST00000459997 PPM1GO15355 546 aaPredicted RBP28.82■■■□□ 2.2
SRM-202ENST00000459997 RAPGEF4Q8WZA2 1011 aa28.81■■■□□ 2.2
SRM-202ENST00000459997 DOT1LQ8TEK3 1739 aa28.8■■■□□ 2.2
SRM-202ENST00000459997 KAT6BQ8WYB5 2073 aa28.79■■■□□ 2.2
SRM-202ENST00000459997 MAP2P11137 1827 aaKnown RBP28.79■■■□□ 2.2
SRM-202ENST00000459997 PANK3Q9H999 370 aa28.79■■■□□ 2.2
SRM-202ENST00000459997 CASZ1Q86V15 1759 aa28.76■■■□□ 2.19
SRM-202ENST00000459997 TATP17735 454 aaPredicted RBP28.76■■■□□ 2.19
SRM-202ENST00000459997 STK32BQ9NY57 414 aa28.76■■■□□ 2.19
SRM-202ENST00000459997 TNNT2P45379 298 aaPredicted RBP28.75■■■□□ 2.19
SRM-202ENST00000459997 SYTL4Q96C24 671 aaPredicted RBP28.75■■■□□ 2.19
SRM-202ENST00000459997 WASHC2AQ641Q2 1341 aa28.74■■■□□ 2.19
SRM-202ENST00000459997 PRIM1P49642 420 aaKnown RBP28.73■■■□□ 2.19
SRM-202ENST00000459997 SPON1Q9HCB6 807 aa28.73■■■□□ 2.19
SRM-202ENST00000459997 POLKQ9UBT6 870 aa28.73■■■□□ 2.19
SRM-202ENST00000459997 SLC15A2Q16348 729 aa28.72■■■□□ 2.19
SRM-202ENST00000459997 PAPPAQ13219 1627 aa28.72■■■□□ 2.19
SRM-202ENST00000459997 PDGFDQ9GZP0 370 aaPredicted RBP28.7■■■□□ 2.18
SRM-202ENST00000459997 PCDH11XQ9BZA7 1347 aa28.69■■■□□ 2.18
SRM-202ENST00000459997 PCDH11YQ9BZA8 1340 aa28.69■■■□□ 2.18
SRM-202ENST00000459997 NCAPD2Q15021 1401 aa28.69■■■□□ 2.18
SRM-202ENST00000459997 NSD2O96028 1365 aa28.69■■■□□ 2.18
SRM-202ENST00000459997 PKD1L3Q7Z443 1732 aa28.67■■■□□ 2.18
SRM-202ENST00000459997 LRRC4BQ9NT99 713 aa28.67■■■□□ 2.18
SRM-202ENST00000459997 PPP1R1BQ9UD71 204 aaPredicted RBP28.66■■■□□ 2.18
SRM-202ENST00000459997 KIF7Q2M1P5 1343 aa28.66■■■□□ 2.18
SRM-202ENST00000459997 EYA1Q99502 592 aa28.65■■■□□ 2.18
SRM-202ENST00000459997 ZBTB7AO95365 584 aa28.64■■■□□ 2.18
SRM-202ENST00000459997 SLC27A3Q5K4L6 730 aa28.64■■■□□ 2.18
SRM-202ENST00000459997 LY75O60449 1722 aa28.63■■■□□ 2.17
SRM-202ENST00000459997 KNSTRNQ9Y448 316 aa28.63■■■□□ 2.17
SRM-202ENST00000459997 CYP27B1O15528 508 aa28.62■■■□□ 2.17
SRM-202ENST00000459997 EIF4A2Q14240 407 aaKnown RBP28.62■■■□□ 2.17
SRM-202ENST00000459997 MORC1Q86VD1 984 aa28.62■■■□□ 2.17
SRM-202ENST00000459997 ZNF827Q17R98 1081 aa28.61■■■□□ 2.17
SRM-202ENST00000459997 KCNQ4P56696 695 aa28.59■■■□□ 2.17
SRM-202ENST00000459997 SPG7Q9UQ90 795 aa28.59■■■□□ 2.17
SRM-202ENST00000459997 TOGARAM1Q9Y4F4 1720 aa28.59■■■□□ 2.17
SRM-202ENST00000459997 ATF5Q9Y2D1 282 aaPredicted RBP28.58■■■□□ 2.17
SRM-202ENST00000459997 AKT1S1Q96B36 256 aa28.56■■■□□ 2.16
SRM-202ENST00000459997 MTFR1LQ9H019 292 aa28.55■■■□□ 2.16
SRM-202ENST00000459997 CCNL1Q9UK58 526 aaPredicted RBP28.55■■■□□ 2.16
SRM-202ENST00000459997 PTGER2P43116 358 aa28.54■■■□□ 2.16
SRM-202ENST00000459997 MPRIPQ6WCQ1 1025 aa28.54■■■□□ 2.16
SRM-202ENST00000459997 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.54■■■□□ 2.16
SRM-202ENST00000459997 ITGB4P16144 1822 aa28.54■■■□□ 2.16
SRM-202ENST00000459997 QSER1Q2KHR3 1735 aa28.54■■■□□ 2.16
SRM-202ENST00000459997 IGSF1Q8N6C5 1336 aa28.53■■■□□ 2.16
SRM-202ENST00000459997 AMER1Q5JTC6 1135 aaPredicted RBP28.53■■■□□ 2.16
SRM-202ENST00000459997 TUBGCP6Q96RT7 1819 aa28.51■■■□□ 2.15
SRM-202ENST00000459997 NKX1-1Q15270 411 aaPredicted RBP28.51■■■□□ 2.15
SRM-202ENST00000459997 TFCP2L1Q9NZI6 479 aa28.5■■■□□ 2.15
SRM-202ENST00000459997 PALLDQ8WX93 1383 aa28.49■■■□□ 2.15
SRM-202ENST00000459997 PLEKHG2Q9H7P9 1386 aa28.49■■■□□ 2.15
SRM-202ENST00000459997 IFNL2Q8IZJ0 200 aa28.48■■■□□ 2.15
SRM-202ENST00000459997 C5P01031 1676 aa28.48■■■□□ 2.15
SRM-202ENST00000459997 PNPLA7Q6ZV29 1317 aa28.47■■■□□ 2.15
SRM-202ENST00000459997 PHKG2P15735 406 aa28.47■■■□□ 2.15
SRM-202ENST00000459997 SGIP1Q9BQI5 828 aa28.46■■■□□ 2.15
SRM-202ENST00000459997 PIGBQ92521 554 aa28.45■■■□□ 2.14
SRM-202ENST00000459997 PER1O15534 1290 aaPredicted RBP28.44■■■□□ 2.14
SRM-202ENST00000459997 SMARCC1Q92922 1105 aaPredicted RBP28.44■■■□□ 2.14
SRM-202ENST00000459997 TMOD3Q9NYL9 352 aa28.43■■■□□ 2.14
SRM-202ENST00000459997 TAF1LQ8IZX4 1826 aa28.42■■■□□ 2.14
SRM-202ENST00000459997 CC2D1BQ5T0F9 858 aaKnown RBP28.42■■■□□ 2.14
SRM-202ENST00000459997 SLC16A10Q8TF71 515 aa28.42■■■□□ 2.14
SRM-202ENST00000459997 AEBP1Q8IUX7 1158 aa28.41■■■□□ 2.14
SRM-202ENST00000459997 PLEKHO1Q53GL0 409 aaPredicted RBP28.4■■■□□ 2.14
SRM-202ENST00000459997 FHDC1Q9C0D6 1143 aaPredicted RBP28.4■■■□□ 2.14
SRM-202ENST00000459997 HMGB2P26583 209 aaKnown RBP28.39■■■□□ 2.14
SRM-202ENST00000459997 IL13P35225 146 aa28.39■■■□□ 2.14
SRM-202ENST00000459997 ARXQ96QS3 562 aa28.39■■■□□ 2.14
SRM-202ENST00000459997 DCAF8L1A6NGE4 600 aa28.38■■■□□ 2.13
SRM-202ENST00000459997 MTHFSP49914 203 aa28.38■■■□□ 2.13
SRM-202ENST00000459997 SULT6B1Q6IMI4 303 aa28.38■■■□□ 2.13
SRM-202ENST00000459997 MSH5O43196 834 aa28.37■■■□□ 2.13
SRM-202ENST00000459997 AMOTQ4VCS5 1084 aa28.37■■■□□ 2.13
SRM-202ENST00000459997 ZNF530Q6P9A1 599 aaPredicted RBP28.37■■■□□ 2.13
SRM-202ENST00000459997 C4BP0C0L5 1744 aa28.37■■■□□ 2.13
SRM-202ENST00000459997 COL24A1Q17RW2 1714 aa28.37■■■□□ 2.13
SRM-202ENST00000459997 KDRP35968 1356 aa28.36■■■□□ 2.13
SRM-202ENST00000459997 HSP90AB1P08238 724 aaKnown RBP28.35■■■□□ 2.13
SRM-202ENST00000459997 COL23A1Q86Y22 540 aaPredicted RBP28.35■■■□□ 2.13
SRM-202ENST00000459997 SYT17Q9BSW7 474 aa28.35■■■□□ 2.13
SRM-202ENST00000459997 ASAP1Q9ULH1 1129 aa28.35■■■□□ 2.13
SRM-202ENST00000459997 POLD1P28340 1107 aa28.34■■■□□ 2.13
SRM-202ENST00000459997 CNGB1Q14028 1251 aaPredicted RBP28.34■■■□□ 2.13
SRM-202ENST00000459997 DCAF5Q96JK2 942 aa28.34■■■□□ 2.13
SRM-202ENST00000459997 LOC102724428A0A0B4J2F2 783 aa28.33■■■□□ 2.13
SRM-202ENST00000459997 SIK1P57059 783 aa28.33■■■□□ 2.13
SRM-202ENST00000459997 NPC1L1Q9UHC9 1359 aa28.33■■■□□ 2.13
SRM-202ENST00000459997 ERVV-2B6SEH9 535 aa28.32■■■□□ 2.12
SRM-202ENST00000459997 KDM6AO15550 1401 aaPredicted RBP28.32■■■□□ 2.12
SRM-202ENST00000459997 C1orf141Q5JVX7 400 aa28.31■■■□□ 2.12
SRM-202ENST00000459997 AK7Q96M32 723 aa28.31■■■□□ 2.12
SRM-202ENST00000459997 ATG3Q9NT62 314 aa28.3■■■□□ 2.12
SRM-202ENST00000459997 MAP3K5Q99683 1374 aa28.29■■■□□ 2.12
SRM-202ENST00000459997 FLAD1Q8NFF5 587 aa28.29■■■□□ 2.12
SRM-202ENST00000459997 LINC00116Q8NCU8 138 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms