RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 RGPD5Q99666 1765 aa11.55□□□□□ -0.56
CLTCL1-204ENST00000458188 TATP17735 454 aaPredicted RBP11.55□□□□□ -0.56
CLTCL1-204ENST00000458188 FAM182BQ5T319 152 aa11.55□□□□□ -0.56
CLTCL1-204ENST00000458188 DDX54Q8TDD1 881 aaKnown RBP11.55□□□□□ -0.56
CLTCL1-204ENST00000458188 BRWD3Q6RI45 1802 aa11.55□□□□□ -0.56
CLTCL1-204ENST00000458188 BARGINQ6ZT62 677 aa11.54□□□□□ -0.56
CLTCL1-204ENST00000458188 KRT27Q7Z3Y8 459 aa11.54□□□□□ -0.56
CLTCL1-204ENST00000458188 THRAP3Q9Y2W1 955 aaKnown RBP11.54□□□□□ -0.56
CLTCL1-204ENST00000458188 EXOC5O00471 708 aa11.53□□□□□ -0.56
CLTCL1-204ENST00000458188 FCHSD2O94868 740 aa11.53□□□□□ -0.56
CLTCL1-204ENST00000458188 NEUROD2Q15784 382 aa11.53□□□□□ -0.56
CLTCL1-204ENST00000458188 MTHFSDQ2M296 383 aaKnown RBP11.53□□□□□ -0.56
CLTCL1-204ENST00000458188 PLEKHF1Q96S99 279 aa11.53□□□□□ -0.56
CLTCL1-204ENST00000458188 RRP7AQ9Y3A4 280 aaKnown RBP11.53□□□□□ -0.56
CLTCL1-204ENST00000458188 SALL2Q9Y467 1007 aaPredicted RBP11.53□□□□□ -0.56
CLTCL1-204ENST00000458188 ABCC6O95255 1503 aa11.53□□□□□ -0.56
CLTCL1-204ENST00000458188 NRAPQ86VF7 1730 aa11.52□□□□□ -0.56
CLTCL1-204ENST00000458188 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.52□□□□□ -0.56
CLTCL1-204ENST00000458188 MEGF6O75095 1541 aa11.52□□□□□ -0.57
CLTCL1-204ENST00000458188 R3HDM1Q15032 1099 aaKnown RBP11.52□□□□□ -0.57
CLTCL1-204ENST00000458188 DDB1Q16531 1140 aa11.52□□□□□ -0.57
CLTCL1-204ENST00000458188 ZCRB1Q8TBF4 217 aaKnown RBP11.52□□□□□ -0.57
CLTCL1-204ENST00000458188 ONECUT3O60422 494 aaPredicted RBP11.51□□□□□ -0.57
CLTCL1-204ENST00000458188 PLEKHO1Q53GL0 409 aaPredicted RBP11.51□□□□□ -0.57
CLTCL1-204ENST00000458188 GLI3P10071 1580 aa11.5□□□□□ -0.57
CLTCL1-204ENST00000458188 APAF1O14727 1248 aa11.5□□□□□ -0.57
CLTCL1-204ENST00000458188 PDE3BQ13370 1112 aa11.5□□□□□ -0.57
CLTCL1-204ENST00000458188 ZNF530Q6P9A1 599 aaPredicted RBP11.5□□□□□ -0.57
CLTCL1-204ENST00000458188 MARCH10Q8NA82 808 aaPredicted RBP11.5□□□□□ -0.57
CLTCL1-204ENST00000458188 RUNDC1Q96C34 613 aa11.5□□□□□ -0.57
CLTCL1-204ENST00000458188 SPG7Q9UQ90 795 aa11.5□□□□□ -0.57
CLTCL1-204ENST00000458188 MAPK8IP3Q9UPT6 1336 aa11.5□□□□□ -0.57
CLTCL1-204ENST00000458188 KDRP35968 1356 aa11.5□□□□□ -0.57
CLTCL1-204ENST00000458188 NWD2Q9ULI1 1742 aa11.49□□□□□ -0.57
CLTCL1-204ENST00000458188 RGPD2P0DJD1 1756 aa11.49□□□□□ -0.57
CLTCL1-204ENST00000458188 CYP27B1O15528 508 aa11.49□□□□□ -0.57
CLTCL1-204ENST00000458188 EN1Q05925 392 aaPredicted RBP11.49□□□□□ -0.57
CLTCL1-204ENST00000458188 CDCA7Q9BWT1 371 aaPredicted RBP11.49□□□□□ -0.57
CLTCL1-204ENST00000458188 DISP2A7MBM2 1401 aa11.49□□□□□ -0.57
CLTCL1-204ENST00000458188 NEFMP07197 916 aa11.48□□□□□ -0.57
CLTCL1-204ENST00000458188 RIPK4P57078 832 aa11.48□□□□□ -0.57
CLTCL1-204ENST00000458188 DCTN1Q14203 1278 aa11.48□□□□□ -0.57
CLTCL1-204ENST00000458188 AMOTQ4VCS5 1084 aa11.48□□□□□ -0.57
CLTCL1-204ENST00000458188 MPRIPQ6WCQ1 1025 aa11.48□□□□□ -0.57
CLTCL1-204ENST00000458188 PNNQ9H307 717 aaKnown RBP11.48□□□□□ -0.57
CLTCL1-204ENST00000458188 OVOS2A0A0G2JMS6 1433 aa11.48□□□□□ -0.57
CLTCL1-204ENST00000458188 NCAPD2Q15021 1401 aa11.48□□□□□ -0.57
CLTCL1-204ENST00000458188 PHKG2P15735 406 aa11.47□□□□□ -0.57
CLTCL1-204ENST00000458188 TMPOP42166 694 aaKnown RBP11.47□□□□□ -0.57
CLTCL1-204ENST00000458188 IFFO2Q5TF58 517 aa11.47□□□□□ -0.57
CLTCL1-204ENST00000458188 ACSBG1Q96GR2 724 aa11.47□□□□□ -0.57
CLTCL1-204ENST00000458188 THUMPD2Q9BTF0 503 aaKnown RBP11.47□□□□□ -0.57
CLTCL1-204ENST00000458188 LGR6Q9HBX8 967 aa11.47□□□□□ -0.57
CLTCL1-204ENST00000458188 RGPD1P0DJD0 1748 aa11.46□□□□□ -0.57
CLTCL1-204ENST00000458188 FAM208AQ9UK61 1670 aaKnown RBP11.46□□□□□ -0.57
CLTCL1-204ENST00000458188 NFE2L2Q16236 605 aa11.46□□□□□ -0.57
CLTCL1-204ENST00000458188 C1orf141Q5JVX7 400 aa11.46□□□□□ -0.57
CLTCL1-204ENST00000458188 MCM10Q7L590 875 aa11.46□□□□□ -0.57
CLTCL1-204ENST00000458188 IFNL2Q8IZJ0 200 aa11.46□□□□□ -0.57
CLTCL1-204ENST00000458188 GAS2L2Q8NHY3 880 aa11.46□□□□□ -0.57
CLTCL1-204ENST00000458188 YTHDC1Q96MU7 727 aaKnown RBP11.46□□□□□ -0.57
CLTCL1-204ENST00000458188 AKAP4Q5JQC9 854 aa11.45□□□□□ -0.58
CLTCL1-204ENST00000458188 PTF1AQ7RTS3 328 aa11.45□□□□□ -0.58
CLTCL1-204ENST00000458188 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.45□□□□□ -0.582e-9■■■■□ 23.1
CLTCL1-204ENST00000458188 PPP1R1BQ9UD71 204 aaPredicted RBP11.45□□□□□ -0.58
CLTCL1-204ENST00000458188 PCDH11XQ9BZA7 1347 aa11.44□□□□□ -0.58
CLTCL1-204ENST00000458188 PCDH11YQ9BZA8 1340 aa11.44□□□□□ -0.58
CLTCL1-204ENST00000458188 GNAT3A8MTJ3 354 aa11.44□□□□□ -0.58
CLTCL1-204ENST00000458188 KCNQ2O43526 872 aa11.44□□□□□ -0.58
CLTCL1-204ENST00000458188 IL17REQ8NFR9 667 aa11.44□□□□□ -0.58
CLTCL1-204ENST00000458188 SYTL4Q96C24 671 aaPredicted RBP11.44□□□□□ -0.58
CLTCL1-204ENST00000458188 PRIM1P49642 420 aaKnown RBP11.43□□□□□ -0.58
CLTCL1-204ENST00000458188 RTF1Q92541 710 aaKnown RBP11.43□□□□□ -0.58
CLTCL1-204ENST00000458188 TRIM35Q9UPQ4 493 aa11.43□□□□□ -0.58
CLTCL1-204ENST00000458188 TNS2Q63HR2 1409 aa11.43□□□□□ -0.58
CLTCL1-204ENST00000458188 RNMTO43148 476 aaKnown RBP11.42□□□□□ -0.58
CLTCL1-204ENST00000458188 HNRNPUQ00839 825 aaKnown RBP eCLIP11.42□□□□□ -0.58
CLTCL1-204ENST00000458188 EZH2Q15910 746 aaKnown RBP11.42□□□□□ -0.58
CLTCL1-204ENST00000458188 MIS18AQ9NYP9 233 aa11.42□□□□□ -0.58
CLTCL1-204ENST00000458188 MAP3K5Q99683 1374 aa11.41□□□□□ -0.58
CLTCL1-204ENST00000458188 NKX1-1Q15270 411 aaPredicted RBP11.41□□□□□ -0.58
CLTCL1-204ENST00000458188 NBPF14Q5TI25 921 aa11.41□□□□□ -0.58
CLTCL1-204ENST00000458188 NFATC2IPQ8NCF5 419 aa11.41□□□□□ -0.58
CLTCL1-204ENST00000458188 DCAF5Q96JK2 942 aa11.41□□□□□ -0.58
CLTCL1-204ENST00000458188 LAS1LQ9Y4W2 734 aaKnown RBP11.41□□□□□ -0.58
CLTCL1-204ENST00000458188 TRIM37O94972 964 aa11.4□□□□□ -0.58
CLTCL1-204ENST00000458188 HSP90AB1P08238 724 aaKnown RBP11.4□□□□□ -0.58
CLTCL1-204ENST00000458188 CABP4P57796 275 aa11.4□□□□□ -0.58
CLTCL1-204ENST00000458188 FAM196AQ6ZSG2 479 aa11.4□□□□□ -0.58
CLTCL1-204ENST00000458188 THSD7AQ9UPZ6 1657 aa11.4□□□□□ -0.59
CLTCL1-204ENST00000458188 KDM6AO15550 1401 aaPredicted RBP11.39□□□□□ -0.59
CLTCL1-204ENST00000458188 WWC1Q8IX03 1113 aa11.39□□□□□ -0.59
CLTCL1-204ENST00000458188 SPON1Q9HCB6 807 aa11.39□□□□□ -0.59
CLTCL1-204ENST00000458188 LRRC37A3O60309 1634 aa11.38□□□□□ -0.59
CLTCL1-204ENST00000458188 SLC39A6Q13433 755 aa11.38□□□□□ -0.59
CLTCL1-204ENST00000458188 PIGBQ92521 554 aa11.38□□□□□ -0.59
CLTCL1-204ENST00000458188 CAMKK2Q96RR4 588 aa11.38□□□□□ -0.59
CLTCL1-204ENST00000458188 KCNQ3O43525 872 aa11.37□□□□□ -0.59
CLTCL1-204ENST00000458188 HTATSF1O43719 755 aaKnown RBP11.37□□□□□ -0.59
CLTCL1-204ENST00000458188 APBA3O96018 575 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms