RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 FOXD4L5Q5VV16 416 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P30-201ENST00000457863 CCDC155Q8N6L0 562 aa6.19□□□□□ -1.42
HMGB3P30-201ENST00000457863 IL27Q8NEV9 243 aa6.19□□□□□ -1.42
HMGB3P30-201ENST00000457863 ZNF592Q92610 1267 aa6.19□□□□□ -1.42
HMGB3P30-201ENST00000457863 FIGNL2A6NMB9 653 aa6.18□□□□□ -1.42
HMGB3P30-201ENST00000457863 ITGA6P23229 1130 aa6.18□□□□□ -1.42
HMGB3P30-201ENST00000457863 ADD1P35611 737 aaKnown RBP6.18□□□□□ -1.42
HMGB3P30-201ENST00000457863 PTGIRP43119 386 aa6.18□□□□□ -1.42
HMGB3P30-201ENST00000457863 RAB15P59190 212 aa6.18□□□□□ -1.42
HMGB3P30-201ENST00000457863 KRT76Q01546 638 aa6.18□□□□□ -1.42
HMGB3P30-201ENST00000457863 PUS7Q96PZ0 661 aaKnown RBP6.18□□□□□ -1.42
HMGB3P30-201ENST00000457863 POLMQ9NP87 494 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P30-201ENST00000457863 SENP3-EIF4A1A0A087X0R7 540 aa6.17□□□□□ -1.42
HMGB3P30-201ENST00000457863 MCCD1P59942 119 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P30-201ENST00000457863 NR1H3Q13133 447 aa6.17□□□□□ -1.42
HMGB3P30-201ENST00000457863 GPR161Q8N6U8 529 aaKnown RBP6.17□□□□□ -1.42
HMGB3P30-201ENST00000457863 MTMR14Q8NCE2 650 aa6.17□□□□□ -1.42
HMGB3P30-201ENST00000457863 CYLDQ9NQC7 956 aa6.17□□□□□ -1.42
HMGB3P30-201ENST00000457863 PCDHB9Q9Y5E1 797 aa6.17□□□□□ -1.42
HMGB3P30-201ENST00000457863 APBB1O00213 710 aa6.16□□□□□ -1.42
HMGB3P30-201ENST00000457863 ERVK-9P63128 1117 aa6.16□□□□□ -1.42
HMGB3P30-201ENST00000457863 ZNF395Q9H8N7 513 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P30-201ENST00000457863 NDUFB9Q9Y6M9 179 aa6.16□□□□□ -1.42
HMGB3P30-201ENST00000457863 GIGYF1O75420 1035 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P30-201ENST00000457863 GPC1P35052 558 aa6.15□□□□□ -1.42
HMGB3P30-201ENST00000457863 RNF20Q5VTR2 975 aa6.15□□□□□ -1.42
HMGB3P30-201ENST00000457863 ATP5J2-PTCD1G3V325 749 aa6.14□□□□□ -1.43
HMGB3P30-201ENST00000457863 RNF144AP50876 292 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P30-201ENST00000457863 CC2D2BQ6DHV5 1058 aa6.14□□□□□ -1.43
HMGB3P30-201ENST00000457863 LYSMD3Q7Z3D4 306 aa6.14□□□□□ -1.43
HMGB3P30-201ENST00000457863 KCTD17Q8N5Z5 321 aa6.14□□□□□ -1.43
HMGB3P30-201ENST00000457863 CNTNAP3BQ96NU0 1288 aa6.14□□□□□ -1.43
HMGB3P30-201ENST00000457863 COL25A1Q9BXS0 654 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P30-201ENST00000457863 CHMP4AQ9BY43 222 aa6.14□□□□□ -1.43
HMGB3P30-201ENST00000457863 CNTNAP3Q9BZ76 1288 aa6.14□□□□□ -1.43
HMGB3P30-201ENST00000457863 ZNF330Q9Y3S2 320 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P30-201ENST00000457863 RGS22Q8NE09 1264 aa6.13□□□□□ -1.43
HMGB3P30-201ENST00000457863 RAD21O60216 631 aa6.12□□□□□ -1.43
HMGB3P30-201ENST00000457863 SLURP2P0DP57 97 aa6.12□□□□□ -1.43
HMGB3P30-201ENST00000457863 RNFT1Q5M7Z0 435 aa6.12□□□□□ -1.43
HMGB3P30-201ENST00000457863 SV2AQ7L0J3 742 aa6.12□□□□□ -1.43
HMGB3P30-201ENST00000457863 CYP2U1Q7Z449 544 aa6.12□□□□□ -1.43
HMGB3P30-201ENST00000457863 CDC14CA4D256 554 aa6.11□□□□□ -1.43
HMGB3P30-201ENST00000457863 TRAK2O60296 914 aa6.11□□□□□ -1.43
HMGB3P30-201ENST00000457863 KCNMA1Q12791 1236 aa6.1□□□□□ -1.43
HMGB3P30-201ENST00000457863 CLN3Q13286 438 aa6.1□□□□□ -1.43
HMGB3P30-201ENST00000457863 VWA5B2Q8N398 1253 aa6.1□□□□□ -1.43
HMGB3P30-201ENST00000457863 GMCL1Q96IK5 515 aa6.1□□□□□ -1.43
HMGB3P30-201ENST00000457863 SNRKQ9NRH2 765 aa6.1□□□□□ -1.43
HMGB3P30-201ENST00000457863 A0A1W2PRU2 124 aa6.09□□□□□ -1.43
HMGB3P30-201ENST00000457863 ARID3CA6NKF2 412 aa6.09□□□□□ -1.43
HMGB3P30-201ENST00000457863 SCTRP47872 440 aa6.09□□□□□ -1.43
HMGB3P30-201ENST00000457863 ZNF385CQ66K41 422 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P30-201ENST00000457863 OSBPL3Q9H4L5 887 aa6.09□□□□□ -1.43
HMGB3P30-201ENST00000457863 CUEDC1Q9NWM3 386 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P30-201ENST00000457863 PCDHB11Q9Y5F2 797 aa6.09□□□□□ -1.43
HMGB3P30-201ENST00000457863 RNF225M0QZC1 329 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P30-201ENST00000457863 MEN1O00255 615 aa6.08□□□□□ -1.44
HMGB3P30-201ENST00000457863 GSK3AP49840 483 aa6.08□□□□□ -1.44
HMGB3P30-201ENST00000457863 GAS6Q14393 721 aa6.08□□□□□ -1.44
HMGB3P30-201ENST00000457863 WDR44Q5JSH3 913 aa6.08□□□□□ -1.44
HMGB3P30-201ENST00000457863 PRICKLE2Q7Z3G6 844 aa6.08□□□□□ -1.44
HMGB3P30-201ENST00000457863 TRIM22Q8IYM9 498 aa6.08□□□□□ -1.44
HMGB3P30-201ENST00000457863 ZNF837Q96EG3 531 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P30-201ENST00000457863 DYRK1BQ9Y463 629 aa6.08□□□□□ -1.44
HMGB3P30-201ENST00000457863 SPATA31C2B4DYI2 1134 aa6.07□□□□□ -1.44
HMGB3P30-201ENST00000457863 RHOQP17081 205 aa6.07□□□□□ -1.44
HMGB3P30-201ENST00000457863 SRSF11Q05519 484 aaKnown RBP6.07□□□□□ -1.44
HMGB3P30-201ENST00000457863 SVOPQ8N4V2 548 aa6.07□□□□□ -1.44
HMGB3P30-201ENST00000457863 TRAIPQ9BWF2 469 aa6.07□□□□□ -1.44
HMGB3P30-201ENST00000457863 GRIP2Q9C0E4 1043 aa6.07□□□□□ -1.44
HMGB3P30-201ENST00000457863 ARHGEF10LQ9HCE6 1279 aa6.07□□□□□ -1.44
HMGB3P30-201ENST00000457863 ADAMTS8Q9UP79 889 aa6.07□□□□□ -1.44
HMGB3P30-201ENST00000457863 MTMR7Q9Y216 660 aa6.07□□□□□ -1.44
HMGB3P30-201ENST00000457863 ARHGEF15O94989 841 aa6.06□□□□□ -1.44
HMGB3P30-201ENST00000457863 GNRH1P01148 92 aa6.06□□□□□ -1.44
HMGB3P30-201ENST00000457863 NLRP3Q96P20 1036 aa6.06□□□□□ -1.44
HMGB3P30-201ENST00000457863 TBC1D2BQ9UPU7 963 aa6.06□□□□□ -1.44
HMGB3P30-201ENST00000457863 ADAMTS2O95450 1211 aa6.05□□□□□ -1.44
HMGB3P30-201ENST00000457863 SLC27A3Q5K4L6 730 aa6.05□□□□□ -1.44
HMGB3P30-201ENST00000457863 NBPF10Q6P3W6 841 aaKnown RBP6.05□□□□□ -1.44
HMGB3P30-201ENST00000457863 NBPF15Q8N660 670 aa6.05□□□□□ -1.44
HMGB3P30-201ENST00000457863 CEP126Q9P2H0 1117 aa6.05□□□□□ -1.44
HMGB3P30-201ENST00000457863 H7C1W4 665 aa6.04□□□□□ -1.44
HMGB3P30-201ENST00000457863 WASLO00401 505 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P30-201ENST00000457863 IRF5Q13568 498 aa6.04□□□□□ -1.44
HMGB3P30-201ENST00000457863 WHAMMQ8TF30 809 aa6.04□□□□□ -1.44
HMGB3P30-201ENST00000457863 CCDC85AQ96PX6 553 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P30-201ENST00000457863 ESYT1Q9BSJ8 1104 aa6.04□□□□□ -1.44
HMGB3P30-201ENST00000457863 PRM3Q9NNZ6 103 aa6.04□□□□□ -1.44
HMGB3P30-201ENST00000457863 MBIPQ9NS73 344 aa6.04□□□□□ -1.44
HMGB3P30-201ENST00000457863 HRH3Q9Y5N1 445 aa6.04□□□□□ -1.44
HMGB3P30-201ENST00000457863 MYCP01106 439 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P30-201ENST00000457863 IL2RAP01589 272 aa6.03□□□□□ -1.44
HMGB3P30-201ENST00000457863 EIF4G2P78344 907 aaKnown RBP eCLIP6.03□□□□□ -1.44
HMGB3P30-201ENST00000457863 POU4F2Q12837 409 aa6.03□□□□□ -1.44
HMGB3P30-201ENST00000457863 TAS1R3Q7RTX0 852 aa6.03□□□□□ -1.44
HMGB3P30-201ENST00000457863 PHTF2Q8N3S3 785 aa6.03□□□□□ -1.44
HMGB3P30-201ENST00000457863 RAB6BQ9NRW1 208 aa6.03□□□□□ -1.44
HMGB3P30-201ENST00000457863 CHIC2Q9UKJ5 165 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms