RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 U2SURPO15042 1029 aaKnown RBP24.38■■□□□ 1.49
TRIM13-206ENST00000457662 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.38■■□□□ 1.492e-6■■□□□ 13.2
TRIM13-206ENST00000457662 ANP32CO43423 234 aa24.38■■□□□ 1.49
TRIM13-206ENST00000457662 AEBP1Q8IUX7 1158 aa24.38■■□□□ 1.49
TRIM13-206ENST00000457662 DDX54Q8TDD1 881 aaKnown RBP24.38■■□□□ 1.49
TRIM13-206ENST00000457662 KDRP35968 1356 aa24.37■■□□□ 1.49
TRIM13-206ENST00000457662 RGPD1P0DJD0 1748 aa24.37■■□□□ 1.49
TRIM13-206ENST00000457662 UPF1Q92900 1129 aaKnown RBP eCLIP24.37■■□□□ 1.49
TRIM13-206ENST00000457662 SPG7Q9UQ90 795 aa24.37■■□□□ 1.49
TRIM13-206ENST00000457662 PLEKHG2Q9H7P9 1386 aa24.37■■□□□ 1.49
TRIM13-206ENST00000457662 HMOX1P09601 288 aa24.35■■□□□ 1.49
TRIM13-206ENST00000457662 CCDC125Q86Z20 511 aa24.35■■□□□ 1.49
TRIM13-206ENST00000457662 PLEKHO1Q53GL0 409 aaPredicted RBP24.33■■□□□ 1.49
TRIM13-206ENST00000457662 PCDH11XQ9BZA7 1347 aa24.33■■□□□ 1.49
TRIM13-206ENST00000457662 PCDH11YQ9BZA8 1340 aa24.33■■□□□ 1.49
TRIM13-206ENST00000457662 AMOTQ4VCS5 1084 aa24.32■■□□□ 1.48
TRIM13-206ENST00000457662 BCL9O00512 1426 aa24.32■■□□□ 1.48
TRIM13-206ENST00000457662 U2AF1L5P0DN76 240 aaPredicted RBP24.32■■□□□ 1.48
TRIM13-206ENST00000457662 U2AF1Q01081 240 aaKnown RBP eCLIP24.32■■□□□ 1.48
TRIM13-206ENST00000457662 CYP27B1O15528 508 aa24.29■■□□□ 1.48
TRIM13-206ENST00000457662 SF3B2Q13435 895 aaKnown RBP24.29■■□□□ 1.48
TRIM13-206ENST00000457662 FCHSD2O94868 740 aa24.28■■□□□ 1.48
TRIM13-206ENST00000457662 TRIM37O94972 964 aa24.28■■□□□ 1.48
TRIM13-206ENST00000457662 IFNL2Q8IZJ0 200 aa24.27■■□□□ 1.48
TRIM13-206ENST00000457662 PKD1L3Q7Z443 1732 aa24.27■■□□□ 1.48
TRIM13-206ENST00000457662 EP400Q96L91 3159 aa24.26■■□□□ 1.47
TRIM13-206ENST00000457662 RSPH6AQ9H0K4 717 aa24.26■■□□□ 1.47
TRIM13-206ENST00000457662 SHANK3Q9BYB0 1731 aa24.25■■□□□ 1.47
TRIM13-206ENST00000457662 PHKG2P15735 406 aa24.25■■□□□ 1.47
TRIM13-206ENST00000457662 NKX1-1Q15270 411 aaPredicted RBP24.25■■□□□ 1.47
TRIM13-206ENST00000457662 ZNF530Q6P9A1 599 aaPredicted RBP24.25■■□□□ 1.47
TRIM13-206ENST00000457662 BCL11BQ9C0K0 894 aaPredicted RBP24.25■■□□□ 1.47
TRIM13-206ENST00000457662 KAT6BQ8WYB5 2073 aa24.23■■□□□ 1.47
TRIM13-206ENST00000457662 PRKAR2BP31323 418 aa24.23■■□□□ 1.47
TRIM13-206ENST00000457662 ACSBG1Q96GR2 724 aa24.23■■□□□ 1.47
TRIM13-206ENST00000457662 PNNQ9H307 717 aaKnown RBP24.23■■□□□ 1.47
TRIM13-206ENST00000457662 HSP90AB1P08238 724 aaKnown RBP24.22■■□□□ 1.47
TRIM13-206ENST00000457662 C1orf141Q5JVX7 400 aa24.22■■□□□ 1.47
TRIM13-206ENST00000457662 SBF2Q86WG5 1849 aa24.21■■□□□ 1.47
TRIM13-206ENST00000457662 KCNQ2O43526 872 aa24.2■■□□□ 1.47
TRIM13-206ENST00000457662 WDR43Q15061 677 aaKnown RBP eCLIP24.2■■□□□ 1.47
TRIM13-206ENST00000457662 APBA3O96018 575 aa24.19■■□□□ 1.46
TRIM13-206ENST00000457662 NEFMP07197 916 aa24.19■■□□□ 1.46
TRIM13-206ENST00000457662 BAG6P46379 1132 aa24.19■■□□□ 1.46
TRIM13-206ENST00000457662 MTHFSDQ2M296 383 aaKnown RBP24.19■■□□□ 1.46
TRIM13-206ENST00000457662 PRIM1P49642 420 aaKnown RBP24.19■■□□□ 1.46
TRIM13-206ENST00000457662 AKAP4Q5JQC9 854 aa24.19■■□□□ 1.46
TRIM13-206ENST00000457662 GAS2L2Q8NHY3 880 aa24.19■■□□□ 1.46
TRIM13-206ENST00000457662 PHACTR3Q96KR7 559 aa24.19■■□□□ 1.46
TRIM13-206ENST00000457662 DCAF5Q96JK2 942 aa24.18■■□□□ 1.46
TRIM13-206ENST00000457662 PTF1AQ7RTS3 328 aa24.17■■□□□ 1.46
TRIM13-206ENST00000457662 SYTL4Q96C24 671 aaPredicted RBP24.17■■□□□ 1.46
TRIM13-206ENST00000457662 CCDC184Q52MB2 194 aa24.15■■□□□ 1.46
TRIM13-206ENST00000457662 DIEXFQ68CQ4 756 aaKnown RBP24.15■■□□□ 1.46
TRIM13-206ENST00000457662 DEFB132Q7Z7B7 95 aa24.15■■□□□ 1.46
TRIM13-206ENST00000457662 PLEKHF1Q96S99 279 aa24.14■■□□□ 1.46
TRIM13-206ENST00000457662 MRS2Q9HD23 443 aa24.14■■□□□ 1.46
TRIM13-206ENST00000457662 ADAMTS8Q9UP79 889 aa24.14■■□□□ 1.46
TRIM13-206ENST00000457662 NHSQ6T4R5 1651 aa24.13■■□□□ 1.45
TRIM13-206ENST00000457662 ERVV-2B6SEH9 535 aa24.13■■□□□ 1.45
TRIM13-206ENST00000457662 PLSCR1O15162 318 aa24.13■■□□□ 1.45
TRIM13-206ENST00000457662 TNS1Q9HBL0 1735 aaKnown RBP24.13■■□□□ 1.45
TRIM13-206ENST00000457662 EN1Q05925 392 aaPredicted RBP24.13■■□□□ 1.45
TRIM13-206ENST00000457662 MPRIPQ6WCQ1 1025 aa24.13■■□□□ 1.45
TRIM13-206ENST00000457662 GNAT3A8MTJ3 354 aa24.11■■□□□ 1.45
TRIM13-206ENST00000457662 DOT1LQ8TEK3 1739 aa24.11■■□□□ 1.45
TRIM13-206ENST00000457662 MAPK8IP3Q9UPT6 1336 aa24.11■■□□□ 1.45
TRIM13-206ENST00000457662 CAMKK2Q96RR4 588 aa24.1■■□□□ 1.45
TRIM13-206ENST00000457662 TMOD3Q9NYL9 352 aa24.1■■□□□ 1.45
TRIM13-206ENST00000457662 PNISRQ8TF01 805 aaKnown RBP24.09■■□□□ 1.45
TRIM13-206ENST00000457662 KDM6AO15550 1401 aaPredicted RBP24.08■■□□□ 1.45
TRIM13-206ENST00000457662 RNMTO43148 476 aaKnown RBP24.08■■□□□ 1.45
TRIM13-206ENST00000457662 CABP4P57796 275 aa24.08■■□□□ 1.45
TRIM13-206ENST00000457662 PIGBQ92521 554 aa24.08■■□□□ 1.45
TRIM13-206ENST00000457662 LGR6Q9HBX8 967 aa24.08■■□□□ 1.45
TRIM13-206ENST00000457662 MAP3K5Q99683 1374 aa24.08■■□□□ 1.45
TRIM13-206ENST00000457662 EZH2Q15910 746 aaKnown RBP24.07■■□□□ 1.44
TRIM13-206ENST00000457662 RUNDC1Q96C34 613 aa24.07■■□□□ 1.44
TRIM13-206ENST00000457662 BTAF1O14981 1849 aa24.06■■□□□ 1.44
TRIM13-206ENST00000457662 HTATSF1O43719 755 aaKnown RBP24.06■■□□□ 1.44
TRIM13-206ENST00000457662 NFE2L2Q16236 605 aa24.06■■□□□ 1.44
TRIM13-206ENST00000457662 TOGARAM1Q9Y4F4 1720 aa24.05■■□□□ 1.44
TRIM13-206ENST00000457662 RTF1Q92541 710 aaKnown RBP24.05■■□□□ 1.44
TRIM13-206ENST00000457662 ITGB4P16144 1822 aa24.05■■□□□ 1.44
TRIM13-206ENST00000457662 CCDC146Q8IYE0 955 aa24.04■■□□□ 1.44
TRIM13-206ENST00000457662 NFATC2IPQ8NCF5 419 aa24.04■■□□□ 1.44
TRIM13-206ENST00000457662 IL17REQ8NFR9 667 aa24.04■■□□□ 1.44
TRIM13-206ENST00000457662 SMARCC1Q92922 1105 aaPredicted RBP24.04■■□□□ 1.44
TRIM13-206ENST00000457662 SLC52A2Q9HAB3 445 aa24.03■■□□□ 1.44
TRIM13-206ENST00000457662 SCN11AQ9UI33 1791 aa24.03■■□□□ 1.44
TRIM13-206ENST00000457662 TXNRD1Q16881 649 aa24.02■■□□□ 1.44
TRIM13-206ENST00000457662 CCER2I3L3R5 266 aa24.01■■□□□ 1.43
TRIM13-206ENST00000457662 PROM2Q8N271 834 aa24.01■■□□□ 1.43
TRIM13-206ENST00000457662 TMPOP42166 694 aaKnown RBP24■■□□□ 1.43
TRIM13-206ENST00000457662 RGPD3A6NKT7 1758 aaPredicted RBP24■■□□□ 1.43
TRIM13-206ENST00000457662 RGPD4Q7Z3J3 1758 aa24■■□□□ 1.43
TRIM13-206ENST00000457662 TEFQ10587 303 aa24■■□□□ 1.43
TRIM13-206ENST00000457662 ADAMTS7Q9UKP4 1686 aa23.99■■□□□ 1.43
TRIM13-206ENST00000457662 RIPK4P57078 832 aa23.99■■□□□ 1.43
TRIM13-206ENST00000457662 SLC27A3Q5K4L6 730 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms