RNA–Protein interactions for RNA: ENST00000457212.5

FAM3A-217, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-217ENST00000457212 U2AF1Q01081 240 aaKnown RBP eCLIP27.46■■□□□ 1.99
FAM3A-217ENST00000457212 PDE3BQ13370 1112 aa27.46■■□□□ 1.99
FAM3A-217ENST00000457212 HMOX1P09601 288 aa27.45■■□□□ 1.98
FAM3A-217ENST00000457212 KRT27Q7Z3Y8 459 aa27.45■■□□□ 1.98
FAM3A-217ENST00000457212 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.45■■□□□ 1.98
FAM3A-217ENST00000457212 ZCRB1Q8TBF4 217 aaKnown RBP27.44■■□□□ 1.98
FAM3A-217ENST00000457212 PKD1L3Q7Z443 1732 aa27.42■■□□□ 1.98
FAM3A-217ENST00000457212 SPG7Q9UQ90 795 aa27.42■■□□□ 1.98
FAM3A-217ENST00000457212 FCHSD2O94868 740 aa27.41■■□□□ 1.98
FAM3A-217ENST00000457212 ILDR2Q71H61 639 aa27.41■■□□□ 1.98
FAM3A-217ENST00000457212 WDR43Q15061 677 aaKnown RBP eCLIP27.4■■□□□ 1.98
FAM3A-217ENST00000457212 AMOTQ4VCS5 1084 aa27.4■■□□□ 1.98
FAM3A-217ENST00000457212 RSPH6AQ9H0K4 717 aa27.4■■□□□ 1.98
FAM3A-217ENST00000457212 MRS2Q9HD23 443 aa27.4■■□□□ 1.98
FAM3A-217ENST00000457212 PLEKHO1Q53GL0 409 aaPredicted RBP27.39■■□□□ 1.98
FAM3A-217ENST00000457212 CCDC184Q52MB2 194 aa27.38■■□□□ 1.97
FAM3A-217ENST00000457212 PNNQ9H307 717 aaKnown RBP27.38■■□□□ 1.97
FAM3A-217ENST00000457212 PCDH11XQ9BZA7 1347 aa27.38■■□□□ 1.97
FAM3A-217ENST00000457212 PCDH11YQ9BZA8 1340 aa27.38■■□□□ 1.97
FAM3A-217ENST00000457212 MARCH10Q8NA82 808 aaPredicted RBP27.37■■□□□ 1.97
FAM3A-217ENST00000457212 SHANK3Q9BYB0 1731 aa27.37■■□□□ 1.97
FAM3A-217ENST00000457212 PRKAR2BP31323 418 aa27.36■■□□□ 1.97
FAM3A-217ENST00000457212 DDX54Q8TDD1 881 aaKnown RBP27.35■■□□□ 1.97
FAM3A-217ENST00000457212 CCER2I3L3R5 266 aa27.34■■□□□ 1.97
FAM3A-217ENST00000457212 FAM196AQ6ZSG2 479 aa27.33■■□□□ 1.97
FAM3A-217ENST00000457212 BCL9O00512 1426 aa27.33■■□□□ 1.96
FAM3A-217ENST00000457212 NEFMP07197 916 aa27.32■■□□□ 1.96
FAM3A-217ENST00000457212 CYP27B1O15528 508 aa27.31■■□□□ 1.96
FAM3A-217ENST00000457212 IFNL2Q8IZJ0 200 aa27.31■■□□□ 1.96
FAM3A-217ENST00000457212 PNISRQ8TF01 805 aaKnown RBP27.31■■□□□ 1.96
FAM3A-217ENST00000457212 ADAMTS8Q9UP79 889 aa27.31■■□□□ 1.96
FAM3A-217ENST00000457212 ZNF530Q6P9A1 599 aaPredicted RBP27.3■■□□□ 1.96
FAM3A-217ENST00000457212 FAM182BQ5T319 152 aa27.29■■□□□ 1.96
FAM3A-217ENST00000457212 MIER1Q8N108 512 aa27.29■■□□□ 1.96
FAM3A-217ENST00000457212 GAS2L2Q8NHY3 880 aa27.29■■□□□ 1.96
FAM3A-217ENST00000457212 PHKG2P15735 406 aa27.28■■□□□ 1.96
FAM3A-217ENST00000457212 PHACTR3Q96KR7 559 aa27.28■■□□□ 1.96
FAM3A-217ENST00000457212 PLEKHF1Q96S99 279 aa27.28■■□□□ 1.96
FAM3A-217ENST00000457212 NKX1-1Q15270 411 aaPredicted RBP27.27■■□□□ 1.96
FAM3A-217ENST00000457212 MTHFSDQ2M296 383 aaKnown RBP27.27■■□□□ 1.96
FAM3A-217ENST00000457212 C1orf141Q5JVX7 400 aa27.27■■□□□ 1.96
FAM3A-217ENST00000457212 MAPK8IP3Q9UPT6 1336 aa27.26■■□□□ 1.95
FAM3A-217ENST00000457212 HSP90AB1P08238 724 aaKnown RBP27.26■■□□□ 1.95
FAM3A-217ENST00000457212 AKAP4Q5JQC9 854 aa27.25■■□□□ 1.95
FAM3A-217ENST00000457212 RUNDC1Q96C34 613 aa27.23■■□□□ 1.95
FAM3A-217ENST00000457212 SBF2Q86WG5 1849 aa27.22■■□□□ 1.95
FAM3A-217ENST00000457212 DCAF5Q96JK2 942 aa27.21■■□□□ 1.95
FAM3A-217ENST00000457212 EP400Q96L91 3159 aa27.19■■□□□ 1.94
FAM3A-217ENST00000457212 CCDC146Q8IYE0 955 aa27.19■■□□□ 1.94
FAM3A-217ENST00000457212 MAP3K5Q99683 1374 aa27.19■■□□□ 1.94
FAM3A-217ENST00000457212 DOT1LQ8TEK3 1739 aa27.19■■□□□ 1.94
FAM3A-217ENST00000457212 NHSQ6T4R5 1651 aa27.18■■□□□ 1.94
FAM3A-217ENST00000457212 GNAT3A8MTJ3 354 aa27.18■■□□□ 1.94
FAM3A-217ENST00000457212 NFE2L2Q16236 605 aa27.18■■□□□ 1.94
FAM3A-217ENST00000457212 CCDC125Q86Z20 511 aa27.18■■□□□ 1.94
FAM3A-217ENST00000457212 TRIM37O94972 964 aa27.16■■□□□ 1.94
FAM3A-217ENST00000457212 FAM9BQ8IZU0 186 aa27.16■■□□□ 1.94
FAM3A-217ENST00000457212 ACSBG1Q96GR2 724 aa27.16■■□□□ 1.94
FAM3A-217ENST00000457212 BCL11BQ9C0K0 894 aaPredicted RBP27.16■■□□□ 1.94
FAM3A-217ENST00000457212 KDM6AO15550 1401 aaPredicted RBP27.16■■□□□ 1.94
FAM3A-217ENST00000457212 KAT6BQ8WYB5 2073 aa27.15■■□□□ 1.94
FAM3A-217ENST00000457212 ERVV-2B6SEH9 535 aa27.15■■□□□ 1.94
FAM3A-217ENST00000457212 HTATSF1O43719 755 aaKnown RBP27.15■■□□□ 1.94
FAM3A-217ENST00000457212 MPRIPQ6WCQ1 1025 aa27.15■■□□□ 1.94
FAM3A-217ENST00000457212 TOGARAM1Q9Y4F4 1720 aa27.15■■□□□ 1.94
FAM3A-217ENST00000457212 SCN11AQ9UI33 1791 aa27.14■■□□□ 1.94
FAM3A-217ENST00000457212 ADAMTS7Q9UKP4 1686 aa27.14■■□□□ 1.94
FAM3A-217ENST00000457212 PRIM1P49642 420 aaKnown RBP27.13■■□□□ 1.93
FAM3A-217ENST00000457212 UPF1Q92900 1129 aaKnown RBP eCLIP27.13■■□□□ 1.93
FAM3A-217ENST00000457212 RNMTO43148 476 aaKnown RBP27.12■■□□□ 1.93
FAM3A-217ENST00000457212 KCNQ2O43526 872 aa27.12■■□□□ 1.93
FAM3A-217ENST00000457212 TMPOP42166 694 aaKnown RBP27.12■■□□□ 1.93
FAM3A-217ENST00000457212 SF3B2Q13435 895 aaKnown RBP27.12■■□□□ 1.93
FAM3A-217ENST00000457212 RTF1Q92541 710 aaKnown RBP27.12■■□□□ 1.93
FAM3A-217ENST00000457212 DLG5Q8TDM6 1919 aa27.12■■□□□ 1.93
FAM3A-217ENST00000457212 TNS1Q9HBL0 1735 aaKnown RBP27.11■■□□□ 1.93
FAM3A-217ENST00000457212 SYTL4Q96C24 671 aaPredicted RBP27.11■■□□□ 1.93
FAM3A-217ENST00000457212 ITGB4P16144 1822 aa27.11■■□□□ 1.93
FAM3A-217ENST00000457212 VIRMAQ69YN4 1812 aaKnown RBP27.1■■□□□ 1.93
FAM3A-217ENST00000457212 RIPK4P57078 832 aa27.09■■□□□ 1.93
FAM3A-217ENST00000457212 LMOD3Q0VAK6 560 aa27.09■■□□□ 1.93
FAM3A-217ENST00000457212 LGR6Q9HBX8 967 aa27.09■■□□□ 1.93
FAM3A-217ENST00000457212 TMOD3Q9NYL9 352 aa27.09■■□□□ 1.93
FAM3A-217ENST00000457212 APAF1O14727 1248 aa27.08■■□□□ 1.93
FAM3A-217ENST00000457212 CABP4P57796 275 aa27.08■■□□□ 1.93
FAM3A-217ENST00000457212 IL17REQ8NFR9 667 aa27.08■■□□□ 1.93
FAM3A-217ENST00000457212 MRC1P22897 1456 aa27.07■■□□□ 1.92
FAM3A-217ENST00000457212 PTF1AQ7RTS3 328 aa27.07■■□□□ 1.92
FAM3A-217ENST00000457212 CEMIPQ8WUJ3 1361 aa27.07■■□□□ 1.92
FAM3A-217ENST00000457212 BTAF1O14981 1849 aa27.06■■□□□ 1.92
FAM3A-217ENST00000457212 SOCS7O14512 581 aa27.06■■□□□ 1.92
FAM3A-217ENST00000457212 APBA3O96018 575 aa27.06■■□□□ 1.92
FAM3A-217ENST00000457212 SLC52A2Q9HAB3 445 aa27.06■■□□□ 1.92
FAM3A-217ENST00000457212 PIGBQ92521 554 aa27.05■■□□□ 1.92
FAM3A-217ENST00000457212 RRP7AQ9Y3A4 280 aaKnown RBP27.05■■□□□ 1.92
FAM3A-217ENST00000457212 NEUROD2Q15784 382 aa27.04■■□□□ 1.92
FAM3A-217ENST00000457212 BAG6P46379 1132 aa27.03■■□□□ 1.92
FAM3A-217ENST00000457212 TEFQ10587 303 aa27.03■■□□□ 1.92
FAM3A-217ENST00000457212 NCBP3Q53F19 620 aaKnown RBP27.03■■□□□ 1.92
FAM3A-217ENST00000457212 MCM10Q7L590 875 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms