RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 CCNL1Q9UK58 526 aaPredicted RBP18.8■□□□□ 0.6
SNHG17-208ENST00000456953 MSH5O43196 834 aa18.79■□□□□ 0.6
SNHG17-208ENST00000456953 HDGFL2Q7Z4V5 671 aaPredicted RBP18.79■□□□□ 0.6
SNHG17-208ENST00000456953 IP6K1Q92551 441 aa18.79■□□□□ 0.6
SNHG17-208ENST00000456953 GPBP1L1Q9HC44 474 aaPredicted RBP18.79■□□□□ 0.6
SNHG17-208ENST00000456953 EDC4Q6P2E9 1401 aaKnown RBP18.79■□□□□ 0.6
SNHG17-208ENST00000456953 COL23A1Q86Y22 540 aaPredicted RBP18.78■□□□□ 0.6
SNHG17-208ENST00000456953 HSPA6P17066 643 aa18.77■□□□□ 0.6
SNHG17-208ENST00000456953 CD2APQ9Y5K6 639 aa18.77■□□□□ 0.6
SNHG17-208ENST00000456953 TMC1Q8TDI8 760 aa18.76■□□□□ 0.59
SNHG17-208ENST00000456953 LTV1Q96GA3 475 aaPredicted RBP18.76■□□□□ 0.59
SNHG17-208ENST00000456953 ADCY9O60503 1353 aa18.76■□□□□ 0.59
SNHG17-208ENST00000456953 MSL1Q68DK7 614 aa18.75■□□□□ 0.59
SNHG17-208ENST00000456953 ZCRB1Q8TBF4 217 aaKnown RBP18.75■□□□□ 0.59
SNHG17-208ENST00000456953 USP47Q96K76 1375 aa18.75■□□□□ 0.59
SNHG17-208ENST00000456953 HMGB2P26583 209 aaKnown RBP18.74■□□□□ 0.59
SNHG17-208ENST00000456953 TERF2IPQ9NYB0 399 aa18.74■□□□□ 0.59
SNHG17-208ENST00000456953 SLC12A5Q9H2X9 1139 aa18.73■□□□□ 0.59
SNHG17-208ENST00000456953 A0A1W2PP64 1363 aa18.71■□□□□ 0.59
SNHG17-208ENST00000456953 MEGF6O75095 1541 aa18.71■□□□□ 0.59
SNHG17-208ENST00000456953 FLAD1Q8NFF5 587 aa18.71■□□□□ 0.59
SNHG17-208ENST00000456953 C5P01031 1676 aa18.7■□□□□ 0.58
SNHG17-208ENST00000456953 ZNF526Q8TF50 670 aaPredicted RBP18.7■□□□□ 0.58
SNHG17-208ENST00000456953 HOXC9P31274 260 aa18.69■□□□□ 0.58
SNHG17-208ENST00000456953 CGNL1Q0VF96 1302 aa18.69■□□□□ 0.58
SNHG17-208ENST00000456953 MAP3K19Q56UN5 1328 aa18.69■□□□□ 0.58
SNHG17-208ENST00000456953 AMPHP49418 695 aa18.67■□□□□ 0.58
SNHG17-208ENST00000456953 PUS7Q96PZ0 661 aaKnown RBP18.67■□□□□ 0.58
SNHG17-208ENST00000456953 RGPD2P0DJD1 1756 aa18.66■□□□□ 0.58
SNHG17-208ENST00000456953 COG3Q96JB2 828 aa18.66■□□□□ 0.58
SNHG17-208ENST00000456953 SIN3AQ96ST3 1273 aa18.66■□□□□ 0.58
SNHG17-208ENST00000456953 CARD11Q9BXL7 1154 aa18.65■□□□□ 0.58
SNHG17-208ENST00000456953 RTL1A6NKG5 1358 aa18.65■□□□□ 0.58
SNHG17-208ENST00000456953 RAPGEF4Q8WZA2 1011 aa18.64■□□□□ 0.57
SNHG17-208ENST00000456953 TAF1LQ8IZX4 1826 aa18.64■□□□□ 0.57
SNHG17-208ENST00000456953 IGSF1Q8N6C5 1336 aa18.64■□□□□ 0.57
SNHG17-208ENST00000456953 PALLDQ8WX93 1383 aa18.64■□□□□ 0.57
SNHG17-208ENST00000456953 NEUROD1Q13562 356 aa18.63■□□□□ 0.57
SNHG17-208ENST00000456953 KIF3CO14782 793 aa18.62■□□□□ 0.57
SNHG17-208ENST00000456953 NBPF6Q5VWK0 638 aa18.62■□□□□ 0.57
SNHG17-208ENST00000456953 NBPF4Q96M43 638 aa18.62■□□□□ 0.57
SNHG17-208ENST00000456953 C4BP0C0L5 1744 aa18.62■□□□□ 0.57
SNHG17-208ENST00000456953 NSD3Q9BZ95 1437 aa18.61■□□□□ 0.57
SNHG17-208ENST00000456953 PCDH11XQ9BZA7 1347 aa18.61■□□□□ 0.57
SNHG17-208ENST00000456953 PCDH11YQ9BZA8 1340 aa18.61■□□□□ 0.57
SNHG17-208ENST00000456953 APLP1P51693 650 aa18.61■□□□□ 0.57
SNHG17-208ENST00000456953 AK7Q96M32 723 aa18.61■□□□□ 0.57
SNHG17-208ENST00000456953 SMG6Q86US8 1419 aaKnown RBP18.6■□□□□ 0.57
SNHG17-208ENST00000456953 FBLN1P23142 703 aa18.6■□□□□ 0.57
SNHG17-208ENST00000456953 TATP17735 454 aaPredicted RBP18.59■□□□□ 0.57
SNHG17-208ENST00000456953 MPRIPQ6WCQ1 1025 aa18.59■□□□□ 0.57
SNHG17-208ENST00000456953 USHBP1Q8N6Y0 703 aa18.59■□□□□ 0.57
SNHG17-208ENST00000456953 SMARCC1Q92922 1105 aaPredicted RBP18.59■□□□□ 0.57
SNHG17-208ENST00000456953 TOGARAM1Q9Y4F4 1720 aa18.59■□□□□ 0.57
SNHG17-208ENST00000456953 CICQ96RK0 1608 aaPredicted RBP18.59■□□□□ 0.57
SNHG17-208ENST00000456953 AMIGO3Q86WK7 504 aa18.58■□□□□ 0.56
SNHG17-208ENST00000456953 WWC3Q9ULE0 1092 aa18.58■□□□□ 0.56
SNHG17-208ENST00000456953 UBR3Q6ZT12 1888 aa18.58■□□□□ 0.56
SNHG17-208ENST00000456953 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.57■□□□□ 0.56
SNHG17-208ENST00000456953 PHF14O94880 888 aa18.57■□□□□ 0.56
SNHG17-208ENST00000456953 SSFA2P28290 1259 aa18.56■□□□□ 0.56
SNHG17-208ENST00000456953 RRS1Q15050 365 aaKnown RBP18.56■□□□□ 0.56
SNHG17-208ENST00000456953 PCNTO95613 3336 aa18.54■□□□□ 0.56
SNHG17-208ENST00000456953 CYP27B1O15528 508 aa18.54■□□□□ 0.56
SNHG17-208ENST00000456953 TOMM70O94826 608 aa18.54■□□□□ 0.56
SNHG17-208ENST00000456953 DNAJC5GQ8N7S2 189 aa18.54■□□□□ 0.56
SNHG17-208ENST00000456953 INSRP06213 1382 aa18.54■□□□□ 0.56
SNHG17-208ENST00000456953 ITGB4P16144 1822 aa18.53■□□□□ 0.56
SNHG17-208ENST00000456953 TRIM26Q12899 539 aaPredicted RBP18.53■□□□□ 0.56
SNHG17-208ENST00000456953 SMIM5Q71RC9 77 aa18.52■□□□□ 0.56
SNHG17-208ENST00000456953 PIGBQ92521 554 aa18.52■□□□□ 0.56
SNHG17-208ENST00000456953 SLC24A1O60721 1099 aa18.51■□□□□ 0.55
SNHG17-208ENST00000456953 HSP90AB2PQ58FF8 381 aa18.51■□□□□ 0.55
SNHG17-208ENST00000456953 TESK2Q96S53 571 aa18.51■□□□□ 0.55
SNHG17-208ENST00000456953 KIF24Q5T7B8 1368 aa18.51■□□□□ 0.55
SNHG17-208ENST00000456953 LOC102724428A0A0B4J2F2 783 aa18.5■□□□□ 0.55
SNHG17-208ENST00000456953 FYB1O15117 783 aa18.5■□□□□ 0.55
SNHG17-208ENST00000456953 SIK1P57059 783 aa18.5■□□□□ 0.55
SNHG17-208ENST00000456953 LINC00116Q8NCU8 138 aa18.5■□□□□ 0.55
SNHG17-208ENST00000456953 MAP2P11137 1827 aaKnown RBP18.5■□□□□ 0.55
SNHG17-208ENST00000456953 FLT4P35916 1363 aa18.5■□□□□ 0.55
SNHG17-208ENST00000456953 PXDNLA1KZ92 1463 aa18.5■□□□□ 0.55
SNHG17-208ENST00000456953 PKD1L3Q7Z443 1732 aa18.49■□□□□ 0.55
SNHG17-208ENST00000456953 MMP10P09238 476 aa18.49■□□□□ 0.55
SNHG17-208ENST00000456953 NKX1-1Q15270 411 aaPredicted RBP18.49■□□□□ 0.55
SNHG17-208ENST00000456953 GGNBP2Q9H3C7 697 aa18.49■□□□□ 0.55
SNHG17-208ENST00000456953 KIF13BQ9NQT8 1826 aa18.49■□□□□ 0.55
SNHG17-208ENST00000456953 GNPATO15228 680 aa18.48■□□□□ 0.55
SNHG17-208ENST00000456953 TGFB2P61812 414 aa18.48■□□□□ 0.55
SNHG17-208ENST00000456953 KIAA1551Q9HCM1 1747 aa18.46■□□□□ 0.55
SNHG17-208ENST00000456953 ST20-MTHFSA0A0A6YYL1 179 aa18.46■□□□□ 0.55
SNHG17-208ENST00000456953 NMRK2Q9NPI5 230 aa18.46■□□□□ 0.55
SNHG17-208ENST00000456953 BCS1LQ9Y276 419 aa18.46■□□□□ 0.55
SNHG17-208ENST00000456953 ITPK1Q13572 414 aa18.45■□□□□ 0.54
SNHG17-208ENST00000456953 RBM46Q8TBY0 533 aaKnown RBP18.45■□□□□ 0.54
SNHG17-208ENST00000456953 TMOD3Q9NYL9 352 aa18.45■□□□□ 0.54
SNHG17-208ENST00000456953 SPG7Q9UQ90 795 aa18.45■□□□□ 0.54
SNHG17-208ENST00000456953 WDR90Q96KV7 1748 aa18.45■□□□□ 0.54
SNHG17-208ENST00000456953 NCAPD2Q15021 1401 aa18.44■□□□□ 0.54
SNHG17-208ENST00000456953 C10orf71Q711Q0 1435 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms