RNA–Protein interactions for RNA: ENST00000456518.3

SCMH1-211, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 2 BASIC

Gene SCMH1, Length 1,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-211ENST00000456518 PHACTR3Q96KR7 559 aa12.69□□□□□ -0.38
SCMH1-211ENST00000456518 PLEKHF1Q96S99 279 aa12.69□□□□□ -0.38
SCMH1-211ENST00000456518 MEGF6O75095 1541 aa12.69□□□□□ -0.38
SCMH1-211ENST00000456518 TATP17735 454 aaPredicted RBP12.69□□□□□ -0.38
SCMH1-211ENST00000456518 DISP2A7MBM2 1401 aa12.68□□□□□ -0.38
SCMH1-211ENST00000456518 SENP3-EIF4A1A0A087X0R7 540 aa12.68□□□□□ -0.38
SCMH1-211ENST00000456518 ONECUT3O60422 494 aaPredicted RBP12.68□□□□□ -0.38
SCMH1-211ENST00000456518 UPF1Q92900 1129 aaKnown RBP eCLIP12.68□□□□□ -0.382e-7■■□□□ 13
SCMH1-211ENST00000456518 RGS12O14924 1447 aa12.68□□□□□ -0.38
SCMH1-211ENST00000456518 A0A0G2JS52 829 aa12.66□□□□□ -0.38
SCMH1-211ENST00000456518 MTHFSDQ2M296 383 aaKnown RBP12.66□□□□□ -0.38
SCMH1-211ENST00000456518 SEPT12Q8IYM1 358 aa12.66□□□□□ -0.38
SCMH1-211ENST00000456518 OVOS2A0A0G2JMS6 1433 aa12.65□□□□□ -0.38
SCMH1-211ENST00000456518 PLEKHO1Q53GL0 409 aaPredicted RBP12.65□□□□□ -0.38
SCMH1-211ENST00000456518 ZCRB1Q8TBF4 217 aaKnown RBP12.65□□□□□ -0.38
SCMH1-211ENST00000456518 RUNDC1Q96C34 613 aa12.65□□□□□ -0.38
SCMH1-211ENST00000456518 CDCA7Q9BWT1 371 aaPredicted RBP12.65□□□□□ -0.38
SCMH1-211ENST00000456518 EXOC5O00471 708 aa12.64□□□□□ -0.39
SCMH1-211ENST00000456518 PNNQ9H307 717 aaKnown RBP12.64□□□□□ -0.39
SCMH1-211ENST00000456518 CYP27B1O15528 508 aa12.64□□□□□ -0.39
SCMH1-211ENST00000456518 DDB1Q16531 1140 aa12.64□□□□□ -0.39
SCMH1-211ENST00000456518 DDX54Q8TDD1 881 aaKnown RBP12.64□□□□□ -0.39
SCMH1-211ENST00000456518 SPG7Q9UQ90 795 aa12.64□□□□□ -0.39
SCMH1-211ENST00000456518 APAF1O14727 1248 aa12.63□□□□□ -0.39
SCMH1-211ENST00000456518 AMOTQ4VCS5 1084 aa12.63□□□□□ -0.39
SCMH1-211ENST00000456518 ZNF530Q6P9A1 599 aaPredicted RBP12.63□□□□□ -0.39
SCMH1-211ENST00000456518 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.63□□□□□ -0.399e-7■□□□□ 10
SCMH1-211ENST00000456518 RRP7AQ9Y3A4 280 aaKnown RBP12.63□□□□□ -0.39
SCMH1-211ENST00000456518 THSD7AQ9UPZ6 1657 aa12.63□□□□□ -0.39
SCMH1-211ENST00000456518 WNK3Q9BYP7 1800 aa12.62□□□□□ -0.39
SCMH1-211ENST00000456518 MARCH10Q8NA82 808 aaPredicted RBP12.62□□□□□ -0.39
SCMH1-211ENST00000456518 MAPK8IP3Q9UPT6 1336 aa12.62□□□□□ -0.39
SCMH1-211ENST00000456518 NEFMP07197 916 aa12.61□□□□□ -0.39
SCMH1-211ENST00000456518 TMPOP42166 694 aaKnown RBP12.61□□□□□ -0.39
SCMH1-211ENST00000456518 NEUROD2Q15784 382 aa12.61□□□□□ -0.39
SCMH1-211ENST00000456518 NFE2L2Q16236 605 aa12.61□□□□□ -0.39
SCMH1-211ENST00000456518 FAM182BQ5T319 152 aa12.61□□□□□ -0.39
SCMH1-211ENST00000456518 PARP4Q9UKK3 1724 aaKnown RBP12.61□□□□□ -0.39
SCMH1-211ENST00000456518 PHKG2P15735 406 aa12.6□□□□□ -0.39
SCMH1-211ENST00000456518 PDE3BQ13370 1112 aa12.6□□□□□ -0.39
SCMH1-211ENST00000456518 GAS2L2Q8NHY3 880 aa12.6□□□□□ -0.39
SCMH1-211ENST00000456518 TNS2Q63HR2 1409 aa12.6□□□□□ -0.39
SCMH1-211ENST00000456518 LRRC37A3O60309 1634 aa12.6□□□□□ -0.39
SCMH1-211ENST00000456518 RIPK4P57078 832 aa12.6□□□□□ -0.39
SCMH1-211ENST00000456518 IFNL2Q8IZJ0 200 aa12.6□□□□□ -0.39
SCMH1-211ENST00000456518 SALL2Q9Y467 1007 aaPredicted RBP12.6□□□□□ -0.39
SCMH1-211ENST00000456518 PCDH11XQ9BZA7 1347 aa12.6□□□□□ -0.39
SCMH1-211ENST00000456518 PCDH11YQ9BZA8 1340 aa12.6□□□□□ -0.39
SCMH1-211ENST00000456518 PKD1L3Q7Z443 1732 aa12.59□□□□□ -0.39
SCMH1-211ENST00000456518 SHANK3Q9BYB0 1731 aa12.59□□□□□ -0.39
SCMH1-211ENST00000456518 AKAP4Q5JQC9 854 aa12.59□□□□□ -0.39
SCMH1-211ENST00000456518 C1orf141Q5JVX7 400 aa12.59□□□□□ -0.39
SCMH1-211ENST00000456518 MPRIPQ6WCQ1 1025 aa12.59□□□□□ -0.39
SCMH1-211ENST00000456518 KRT27Q7Z3Y8 459 aa12.59□□□□□ -0.39
SCMH1-211ENST00000456518 LGR6Q9HBX8 967 aa12.59□□□□□ -0.39
SCMH1-211ENST00000456518 PLEKHG2Q9H7P9 1386 aa12.58□□□□□ -0.4
SCMH1-211ENST00000456518 DCTN1Q14203 1278 aa12.58□□□□□ -0.4
SCMH1-211ENST00000456518 BRWD3Q6RI45 1802 aa12.57□□□□□ -0.4
SCMH1-211ENST00000456518 GNAT3A8MTJ3 354 aa12.57□□□□□ -0.4
SCMH1-211ENST00000456518 NKX1-1Q15270 411 aaPredicted RBP12.57□□□□□ -0.4
SCMH1-211ENST00000456518 IL17REQ8NFR9 667 aa12.57□□□□□ -0.4
SCMH1-211ENST00000456518 TRIM35Q9UPQ4 493 aa12.57□□□□□ -0.4
SCMH1-211ENST00000456518 MAP3K5Q99683 1374 aa12.57□□□□□ -0.4
SCMH1-211ENST00000456518 MCM10Q7L590 875 aa12.56□□□□□ -0.4
SCMH1-211ENST00000456518 THUMPD2Q9BTF0 503 aaKnown RBP12.56□□□□□ -0.4
SCMH1-211ENST00000456518 RNMTO43148 476 aaKnown RBP12.56□□□□□ -0.4
SCMH1-211ENST00000456518 ACSBG1Q96GR2 724 aa12.56□□□□□ -0.4
SCMH1-211ENST00000456518 KDM6AO15550 1401 aaPredicted RBP12.55□□□□□ -0.4
SCMH1-211ENST00000456518 DCAF5Q96JK2 942 aa12.55□□□□□ -0.4
SCMH1-211ENST00000456518 HTATSF1O43719 755 aaKnown RBP12.54□□□□□ -0.4
SCMH1-211ENST00000456518 HSP90AB1P08238 724 aaKnown RBP12.54□□□□□ -0.4
SCMH1-211ENST00000456518 PTF1AQ7RTS3 328 aa12.54□□□□□ -0.4
SCMH1-211ENST00000456518 RTF1Q92541 710 aaKnown RBP12.54□□□□□ -0.4
SCMH1-211ENST00000456518 GTF3C3Q9Y5Q9 886 aa12.54□□□□□ -0.4
SCMH1-211ENST00000456518 KCNQ2O43526 872 aa12.53□□□□□ -0.4
SCMH1-211ENST00000456518 PRIM1P49642 420 aaKnown RBP12.53□□□□□ -0.4
SCMH1-211ENST00000456518 HNRNPUQ00839 825 aaKnown RBP eCLIP12.53□□□□□ -0.4
SCMH1-211ENST00000456518 DLG5Q8TDM6 1919 aa12.53□□□□□ -0.4
SCMH1-211ENST00000456518 WWC1Q8IX03 1113 aa12.52□□□□□ -0.4
SCMH1-211ENST00000456518 LMOD3Q0VAK6 560 aa12.52□□□□□ -0.41
SCMH1-211ENST00000456518 CCDC27Q2M243 656 aa12.52□□□□□ -0.41
SCMH1-211ENST00000456518 FAM196AQ6ZSG2 479 aa12.52□□□□□ -0.41
SCMH1-211ENST00000456518 NFATC2IPQ8NCF5 419 aa12.52□□□□□ -0.41
SCMH1-211ENST00000456518 YTHDC1Q96MU7 727 aaKnown RBP12.52□□□□□ -0.41
SCMH1-211ENST00000456518 ERVV-2B6SEH9 535 aa12.51□□□□□ -0.41
SCMH1-211ENST00000456518 CABP4P57796 275 aa12.51□□□□□ -0.41
SCMH1-211ENST00000456518 NCBP3Q53F19 620 aaKnown RBP12.51□□□□□ -0.41
SCMH1-211ENST00000456518 SYTL4Q96C24 671 aaPredicted RBP12.51□□□□□ -0.41
SCMH1-211ENST00000456518 CEMIPQ8WUJ3 1361 aa12.51□□□□□ -0.41
SCMH1-211ENST00000456518 BCL9O00512 1426 aa12.5□□□□□ -0.41
SCMH1-211ENST00000456518 TOGARAM1Q9Y4F4 1720 aa12.5□□□□□ -0.41
SCMH1-211ENST00000456518 CCDC125Q86Z20 511 aa12.5□□□□□ -0.41
SCMH1-211ENST00000456518 PIGBQ92521 554 aa12.5□□□□□ -0.41
SCMH1-211ENST00000456518 SLC52A2Q9HAB3 445 aa12.5□□□□□ -0.41
SCMH1-211ENST00000456518 MIS18AQ9NYP9 233 aa12.5□□□□□ -0.41
SCMH1-211ENST00000456518 ZNF521Q96K83 1311 aa12.49□□□□□ -0.41
SCMH1-211ENST00000456518 TRIM37O94972 964 aa12.49□□□□□ -0.41
SCMH1-211ENST00000456518 TEFQ10587 303 aa12.49□□□□□ -0.41
SCMH1-211ENST00000456518 ADAMTS7Q9UKP4 1686 aa12.49□□□□□ -0.41
SCMH1-211ENST00000456518 SCN11AQ9UI33 1791 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms